RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SPATA12Q7Z6I5 190 aa9.73□□□□□ -0.85
USP38-201ENST00000307017 IGHV7-81A0A0B4J1V7 117 aa9.73□□□□□ -0.85
USP38-201ENST00000307017 UNQ9165/PRO28630Q6UXU0 137 aa9.73□□□□□ -0.85
USP38-201ENST00000307017 UPK3BQ9BT76 320 aa9.73□□□□□ -0.85
USP38-201ENST00000307017 RNF152Q8N8N0 203 aa9.72□□□□□ -0.85
USP38-201ENST00000307017 Q8TCH9 128 aa9.72□□□□□ -0.85
USP38-201ENST00000307017 KIAA1549LQ6ZVL6 1849 aa9.72□□□□□ -0.85
USP38-201ENST00000307017 CENPVL3A0A0U1RRI6 287 aa9.72□□□□□ -0.85
USP38-201ENST00000307017 I3L2K1 104 aa9.72□□□□□ -0.85
USP38-201ENST00000307017 PROK1P58294 105 aa9.71□□□□□ -0.85
USP38-201ENST00000307017 C10orf105Q8TEF2 133 aa9.71□□□□□ -0.85
USP38-201ENST00000307017 K7EIM0 57 aa9.71□□□□□ -0.85
USP38-201ENST00000307017 IGF1P05019 195 aa9.71□□□□□ -0.85
USP38-201ENST00000307017 ENHOQ6UWT2 76 aa9.7□□□□□ -0.86
USP38-201ENST00000307017 THSD7BQ9C0I4 1608 aa9.7□□□□□ -0.86
USP38-201ENST00000307017 LINC01548A6NM66 108 aa9.7□□□□□ -0.86
USP38-201ENST00000307017 NDUFC2O95298 119 aa9.7□□□□□ -0.86
USP38-201ENST00000307017 J3KT08 172 aa9.7□□□□□ -0.86
USP38-201ENST00000307017 IGKV1-17P01599 117 aa9.7□□□□□ -0.86
USP38-201ENST00000307017 LINC00322Q6ZN03 302 aaPredicted RBP9.7□□□□□ -0.86
USP38-201ENST00000307017 PIK3CD-AS1Q5SR53 167 aa9.69□□□□□ -0.86
USP38-201ENST00000307017 TOMM6Q96B49 74 aa9.69□□□□□ -0.86
USP38-201ENST00000307017 LINC01545Q5VT33 79 aa9.69□□□□□ -0.86
USP38-201ENST00000307017 VPREB3Q9UKI3 123 aa9.69□□□□□ -0.86
USP38-201ENST00000307017 TMEM131Q92545 1883 aa9.69□□□□□ -0.86
USP38-201ENST00000307017 NUP210LQ5VU65 1888 aa9.69□□□□□ -0.86
USP38-201ENST00000307017 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.69□□□□□ -0.86
USP38-201ENST00000307017 PCNX3Q9H6A9 2034 aa9.69□□□□□ -0.86
USP38-201ENST00000307017 C3orf84H3BNL1 204 aa9.68□□□□□ -0.86
USP38-201ENST00000307017 M0R2N4 97 aa9.68□□□□□ -0.86
USP38-201ENST00000307017 MP68P56378 58 aa9.68□□□□□ -0.86
USP38-201ENST00000307017 CCL18P55774 89 aa9.68□□□□□ -0.86
USP38-201ENST00000307017 TNCP24821 2201 aa9.68□□□□□ -0.86
USP38-201ENST00000307017 ZNF80P51504 273 aaPredicted RBP9.68□□□□□ -0.86
USP38-201ENST00000307017 C20orf197Q8N268 126 aa9.68□□□□□ -0.86
USP38-201ENST00000307017 GDF5OSQ5U4N7 250 aa9.68□□□□□ -0.86
USP38-201ENST00000307017 HIGD2AQ9BW72 106 aa9.68□□□□□ -0.86
USP38-201ENST00000307017 PPDPFQ9H3Y8 114 aa9.68□□□□□ -0.86
USP38-201ENST00000307017 COL4A3Q01955 1670 aa9.67□□□□□ -0.86
USP38-201ENST00000307017 IGLV2-14P01704 120 aa9.67□□□□□ -0.86
USP38-201ENST00000307017 TEN1Q86WV5 123 aa9.67□□□□□ -0.86
USP38-201ENST00000307017 LINC00269Q8N2A0 174 aa9.67□□□□□ -0.86
USP38-201ENST00000307017 NUP210Q8TEM1 1887 aaPredicted RBP9.67□□□□□ -0.86
USP38-201ENST00000307017 IGLV1-44P01699 117 aa9.67□□□□□ -0.86
USP38-201ENST00000307017 C16orf74Q96GX8 76 aa9.67□□□□□ -0.86
USP38-201ENST00000307017 IGLC6P0CF74 106 aa9.66□□□□□ -0.86
USP38-201ENST00000307017 TRBV7-3A0A075B6L6 115 aa9.66□□□□□ -0.86
USP38-201ENST00000307017 ATOX1O00244 68 aa9.66□□□□□ -0.86
USP38-201ENST00000307017 ODF1Q14990 250 aa9.66□□□□□ -0.86
USP38-201ENST00000307017 RETNLBQ9BQ08 111 aa9.66□□□□□ -0.86
USP38-201ENST00000307017 SPAG11BQ08648 103 aa9.66□□□□□ -0.86
USP38-201ENST00000307017 KLK5Q9Y337 293 aaPredicted RBP9.66□□□□□ -0.86
USP38-201ENST00000307017 NANOS2P60321 138 aaKnown RBP9.65□□□□□ -0.86
USP38-201ENST00000307017 FAM167A-AS1Q96KT0 104 aa9.65□□□□□ -0.86
USP38-201ENST00000307017 TRBV10-2A0A0K0K1G8 114 aa9.65□□□□□ -0.86
USP38-201ENST00000307017 UBE2D3P61077 147 aa9.65□□□□□ -0.86
USP38-201ENST00000307017 C5orf56Q8N8D9 126 aa9.65□□□□□ -0.86
USP38-201ENST00000307017 USP17L23D6RBM5 183 aa9.64□□□□□ -0.87
USP38-201ENST00000307017 C16orf54Q6UWD8 224 aa9.64□□□□□ -0.87
USP38-201ENST00000307017 GOLGB1Q14789 3259 aaKnown RBP9.64□□□□□ -0.87
USP38-201ENST00000307017 C2orf70A6NJV1 201 aa9.64□□□□□ -0.87
USP38-201ENST00000307017 DAZ2Q13117 558 aaKnown RBP9.64□□□□□ -0.87
USP38-201ENST00000307017 SPINK6Q6UWN8 80 aa9.64□□□□□ -0.87
USP38-201ENST00000307017 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
USP38-201ENST00000307017 DAZ4Q86SG3 579 aaKnown RBP9.64□□□□□ -0.87
USP38-201ENST00000307017 DAZ3Q9NR90 486 aaKnown RBP9.64□□□□□ -0.87
USP38-201ENST00000307017 Q8N9W7 124 aa9.64□□□□□ -0.87
USP38-201ENST00000307017 DIRC1Q969H9 104 aa9.64□□□□□ -0.87
USP38-201ENST00000307017 NDUFA11Q86Y39 141 aa9.64□□□□□ -0.87
USP38-201ENST00000307017 FAM30AQ9NZY2 134 aa9.64□□□□□ -0.87
USP38-201ENST00000307017 SPANXA1Q9NS26 97 aa9.63□□□□□ -0.87
USP38-201ENST00000307017 IGKV1D-37A0A075B6S9 117 aa9.63□□□□□ -0.87
USP38-201ENST00000307017 MAPKAPK5-AS1Q8N8E1 139 aa9.63□□□□□ -0.87
USP38-201ENST00000307017 IGLV11-55A0A075B6I3 123 aa9.63□□□□□ -0.87
USP38-201ENST00000307017 LINC00311Q8N616 119 aa9.63□□□□□ -0.87
USP38-201ENST00000307017 SLX1AQ9BQ83 275 aa9.63□□□□□ -0.87
USP38-201ENST00000307017 XAGE1AQ9HD64 81 aa9.63□□□□□ -0.87
USP38-201ENST00000307017 IGKV2-28A0A075B6P5 120 aa9.62□□□□□ -0.87
USP38-201ENST00000307017 IGKV2D-28P01615 120 aa9.62□□□□□ -0.87
USP38-201ENST00000307017 LINC00467Q9BRT7 94 aa9.62□□□□□ -0.87
USP38-201ENST00000307017 GVINP1Q7Z2Y8 2422 aa9.62□□□□□ -0.87
USP38-201ENST00000307017 C20orf173Q96LM9 149 aa9.62□□□□□ -0.87
USP38-201ENST00000307017 IL15RAQ13261 267 aa9.62□□□□□ -0.87
USP38-201ENST00000307017 SPART-AS1P0CW21 52 aa9.62□□□□□ -0.87
USP38-201ENST00000307017 COA6Q5JTJ3 125 aaKnown RBP9.62□□□□□ -0.87
USP38-201ENST00000307017 ODF3L1Q8IXM7 274 aa9.62□□□□□ -0.87
USP38-201ENST00000307017 ARHGAP32A7KAX9 2087 aa9.62□□□□□ -0.87
USP38-201ENST00000307017 NDUFA1O15239 70 aa9.62□□□□□ -0.87
USP38-201ENST00000307017 C10orf99Q6UWK7 81 aa9.62□□□□□ -0.87
USP38-201ENST00000307017 HCFC1P51610 2035 aa9.61□□□□□ -0.87
USP38-201ENST00000307017 IGLV2-18A0A075B6J9 118 aa9.61□□□□□ -0.87
USP38-201ENST00000307017 C3orf22Q8N5N4 141 aa9.61□□□□□ -0.87
USP38-201ENST00000307017 LINC00482Q8N8I6 264 aa9.61□□□□□ -0.87
USP38-201ENST00000307017 CNOT1A5YKK6 2376 aaKnown RBP9.61□□□□□ -0.87
USP38-201ENST00000307017 Q6ZTI0 123 aa9.61□□□□□ -0.87
USP38-201ENST00000307017 E9PLD3 99 aa9.61□□□□□ -0.87
USP38-201ENST00000307017 IGLV3-1P01715 115 aa9.61□□□□□ -0.87
USP38-201ENST00000307017 ZFAND3Q9H8U3 227 aa9.61□□□□□ -0.87
USP38-201ENST00000307017 Q6Q795 121 aa9.6□□□□□ -0.87
USP38-201ENST00000307017 POU2AF1Q16633 256 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms