RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 ACYP1P07311 99 aa8.25□□□□□ -1.09
CD44-201ENST00000263398 RBMY1FQ15415 496 aaKnown RBP8.25□□□□□ -1.09
CD44-201ENST00000263398 TMEM131Q92545 1883 aa8.25□□□□□ -1.09
CD44-201ENST00000263398 LINC00322Q6ZN03 302 aaPredicted RBP8.25□□□□□ -1.09
CD44-201ENST00000263398 RNASE8Q8TDE3 154 aaKnown RBP8.25□□□□□ -1.09
CD44-201ENST00000263398 RMI2Q96E14 147 aa8.25□□□□□ -1.09
CD44-201ENST00000263398 ABCA2Q9BZC7 2435 aa8.25□□□□□ -1.09
CD44-201ENST00000263398 ANKRD11Q6UB99 2663 aaPredicted RBP8.25□□□□□ -1.09
CD44-201ENST00000263398 IGHV4OR15-8A0A075B7B6 117 aa8.25□□□□□ -1.09
CD44-201ENST00000263398 A0A087WW49 117 aa8.25□□□□□ -1.09
CD44-201ENST00000263398 C16orf74Q96GX8 76 aa8.25□□□□□ -1.09
CD44-201ENST00000263398 A0A0J9YY99 117 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 C11orf86A6NJI1 115 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 H0YGX0 51 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 K7EQD1 137 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 EIF4EBP1Q13541 118 aaPredicted RBP8.24□□□□□ -1.09
CD44-201ENST00000263398 WFDC2Q14508 124 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 Q8NA96 180 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 LINC01620Q4KN68 170 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 ORMDL1Q9P0S3 153 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 SND1-IT1Q9HBX3 110 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 TRAV4A0A0B4J268 109 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 PLA2G5P39877 138 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 DEFB1P60022 68 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 UNQ9165/PRO28630Q6UXU0 137 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 ATP6V0E2Q8NHE4 81 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 MBD6Q96DN6 1003 aa8.24□□□□□ -1.09
CD44-201ENST00000263398 SZT2Q5T011 3432 aa8.23□□□□□ -1.09
CD44-201ENST00000263398 TRBV7-3A0A075B6L6 115 aa8.23□□□□□ -1.09
CD44-201ENST00000263398 ICOSQ9Y6W8 199 aa8.23□□□□□ -1.09
CD44-201ENST00000263398 ZNF80P51504 273 aaPredicted RBP8.22□□□□□ -1.09
CD44-201ENST00000263398 GYPEP15421 78 aa8.22□□□□□ -1.09
CD44-201ENST00000263398 Q6ZQT7 251 aa8.22□□□□□ -1.09
CD44-201ENST00000263398 Q71RC1 249 aaPredicted RBP8.22□□□□□ -1.09
CD44-201ENST00000263398 C20orf203Q8NBC4 194 aa8.22□□□□□ -1.09
CD44-201ENST00000263398 A0A0J9YX75 114 aa8.22□□□□□ -1.09
CD44-201ENST00000263398 LOXL1Q08397 574 aaPredicted RBP8.22□□□□□ -1.09
CD44-201ENST00000263398 GDF5OSQ5U4N7 250 aa8.22□□□□□ -1.09
CD44-201ENST00000263398 C1orf229Q6ZS94 237 aaPredicted RBP8.22□□□□□ -1.09
CD44-201ENST00000263398 CITED1Q99966 193 aa8.21□□□□□ -1.09
CD44-201ENST00000263398 ODF3BA8MYP8 253 aa8.21□□□□□ -1.1
CD44-201ENST00000263398 IGLC6P0CF74 106 aa8.21□□□□□ -1.1
CD44-201ENST00000263398 MRPL23Q16540 153 aaKnown RBP8.21□□□□□ -1.1
CD44-201ENST00000263398 CEP192Q8TEP8 1941 aa8.21□□□□□ -1.1
CD44-201ENST00000263398 TRACP01848 142 aa8.21□□□□□ -1.1
CD44-201ENST00000263398 HIST2H2BCQ6DN03 193 aa8.21□□□□□ -1.1
CD44-201ENST00000263398 VSIG2Q96IQ7 327 aa8.21□□□□□ -1.1
CD44-201ENST00000263398 DOPEY1Q5JWR5 2465 aa8.21□□□□□ -1.1
CD44-201ENST00000263398 CCDC140Q96MF4 163 aa8.2□□□□□ -1.1
CD44-201ENST00000263398 FSTL3O95633 263 aa8.2□□□□□ -1.1
CD44-201ENST00000263398 TRBV12-3P01733 135 aa8.2□□□□□ -1.1
CD44-201ENST00000263398 LMO4P61968 165 aa8.2□□□□□ -1.1
CD44-201ENST00000263398 PIFOQ8TCI5 191 aa8.2□□□□□ -1.1
CD44-201ENST00000263398 MDFICQ9P1T7 246 aa8.2□□□□□ -1.1
CD44-201ENST00000263398 A6NDX4 124 aa8.2□□□□□ -1.1
CD44-201ENST00000263398 ATP5G1P05496 136 aa8.2□□□□□ -1.1
CD44-201ENST00000263398 C9orf66Q5T8R8 295 aa8.2□□□□□ -1.1
CD44-201ENST00000263398 TMEM61Q8N0U2 210 aa8.2□□□□□ -1.1
CD44-201ENST00000263398 COX7B2Q8TF08 81 aa8.2□□□□□ -1.1
CD44-201ENST00000263398 YPEL4Q96NS1 127 aa8.2□□□□□ -1.1
CD44-201ENST00000263398 IGKV2D-24A0A075B6R9 120 aa8.19□□□□□ -1.1
CD44-201ENST00000263398 COX7A2LO14548 114 aa8.19□□□□□ -1.1
CD44-201ENST00000263398 C1orf43Q9BWL3 253 aa8.19□□□□□ -1.1
CD44-201ENST00000263398 SPART-AS1P0CW21 52 aa8.19□□□□□ -1.1
CD44-201ENST00000263398 C22orf34Q6ZV56 151 aa8.19□□□□□ -1.1
CD44-201ENST00000263398 RS1O15537 224 aa8.19□□□□□ -1.1
CD44-201ENST00000263398 FOXI1Q12951 378 aa8.19□□□□□ -1.1
CD44-201ENST00000263398 TRANK1O15050 2925 aa8.19□□□□□ -1.1
CD44-201ENST00000263398 IGHV1-58A0A0C4DH39 117 aa8.19□□□□□ -1.1
CD44-201ENST00000263398 NRGNQ92686 78 aa8.19□□□□□ -1.1
CD44-201ENST00000263398 SPANXCQ9NY87 97 aa8.19□□□□□ -1.1
CD44-201ENST00000263398 B5MCH6 92 aa8.18□□□□□ -1.1
CD44-201ENST00000263398 H3BT86 120 aa8.18□□□□□ -1.1
CD44-201ENST00000263398 DAND5Q8N907 189 aa8.18□□□□□ -1.1
CD44-201ENST00000263398 OPRPNQ99935 248 aaPredicted RBP8.18□□□□□ -1.1
CD44-201ENST00000263398 IGLV10-54A0A075B6I4 117 aa8.18□□□□□ -1.1
CD44-201ENST00000263398 TRBV10-1A0A0K0K1A3 114 aa8.18□□□□□ -1.1
CD44-201ENST00000263398 TNFRSF13BO14836 293 aaPredicted RBP8.18□□□□□ -1.1
CD44-201ENST00000263398 CRYGBP07316 175 aa8.17□□□□□ -1.1
CD44-201ENST00000263398 IGHV3-30-3P0DP02 117 aa8.17□□□□□ -1.1
CD44-201ENST00000263398 DSCAMO60469 2012 aa8.17□□□□□ -1.1
CD44-201ENST00000263398 TRBV10-2A0A0K0K1G8 114 aa8.17□□□□□ -1.1
CD44-201ENST00000263398 LINC01548A6NM66 108 aa8.17□□□□□ -1.1
CD44-201ENST00000263398 CAMK2N2Q96S95 79 aa8.17□□□□□ -1.1
CD44-201ENST00000263398 IGF1P05019 195 aa8.16□□□□□ -1.1
CD44-201ENST00000263398 EBI3Q14213 229 aa8.16□□□□□ -1.1
CD44-201ENST00000263398 HHLA3Q9XRX5 114 aa8.16□□□□□ -1.1
CD44-201ENST00000263398 A0A0B4J2C4 111 aa8.15□□□□□ -1.1
CD44-201ENST00000263398 TP53TG3Q9ULZ0 132 aa8.15□□□□□ -1.1
CD44-201ENST00000263398 HCFC1P51610 2035 aa8.15□□□□□ -1.1
CD44-201ENST00000263398 C10orf142B7Z368 130 aa8.15□□□□□ -1.1
CD44-201ENST00000263398 LGALS9O00182 355 aa8.15□□□□□ -1.1
CD44-201ENST00000263398 MYCNOSP40205 109 aa8.15□□□□□ -1.1
CD44-201ENST00000263398 NDUFA11Q86Y39 141 aa8.15□□□□□ -1.1
CD44-201ENST00000263398 C4orf3Q8WVX3 66 aa8.15□□□□□ -1.1
CD44-201ENST00000263398 ODF3Q96PU9 254 aa8.15□□□□□ -1.1
CD44-201ENST00000263398 G3V4G9 280 aa8.15□□□□□ -1.1
CD44-201ENST00000263398 Q9HAA7 133 aa8.15□□□□□ -1.1
CD44-201ENST00000263398 KIAA1549Q9HCM3 1950 aa8.15□□□□□ -1.11
CD44-201ENST00000263398 TMEM263Q8WUH6 116 aaKnown RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms