RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 PTPN13Q12923 2485 aa11.86□□□□□ -0.51
DDX1-201ENST00000233084 MAP1AP78559 2803 aaPredicted RBP11.86□□□□□ -0.51
DDX1-201ENST00000233084 A0A0B4J2C4 111 aa11.86□□□□□ -0.51
DDX1-201ENST00000233084 PRSS2P07478 247 aa11.86□□□□□ -0.51
DDX1-201ENST00000233084 Q6ZSV7 163 aa11.86□□□□□ -0.51
DDX1-201ENST00000233084 GPHB5Q86YW7 130 aa11.86□□□□□ -0.51
DDX1-201ENST00000233084 TMEM126AQ9H061 195 aa11.86□□□□□ -0.51
DDX1-201ENST00000233084 TRGV11A0A075B6L2 103 aa11.85□□□□□ -0.51
DDX1-201ENST00000233084 NPC2P61916 151 aa11.85□□□□□ -0.51
DDX1-201ENST00000233084 CLEC2BQ92478 149 aa11.85□□□□□ -0.51
DDX1-201ENST00000233084 ABCA12Q86UK0 2595 aa11.85□□□□□ -0.51
DDX1-201ENST00000233084 OOSP1A8MZH6 123 aa11.85□□□□□ -0.51
DDX1-201ENST00000233084 GNRH2O43555 120 aa11.85□□□□□ -0.51
DDX1-201ENST00000233084 C15orf32Q32M92 178 aa11.85□□□□□ -0.51
DDX1-201ENST00000233084 CEMP1Q6PRD7 247 aaPredicted RBP11.85□□□□□ -0.51
DDX1-201ENST00000233084 MRPL23Q16540 153 aaKnown RBP11.84□□□□□ -0.51
DDX1-201ENST00000233084 POLQO75417 2590 aa11.84□□□□□ -0.51
DDX1-201ENST00000233084 JPT2Q9H910 190 aa11.84□□□□□ -0.51
DDX1-201ENST00000233084 ANKRD17O75179 2603 aaKnown RBP11.83□□□□□ -0.52
DDX1-201ENST00000233084 C16orf92Q96LL3 132 aa11.83□□□□□ -0.52
DDX1-201ENST00000233084 ZFAND3Q9H8U3 227 aa11.83□□□□□ -0.52
DDX1-201ENST00000233084 SPANXA1Q9NS26 97 aa11.83□□□□□ -0.52
DDX1-201ENST00000233084 APCP25054 2843 aa11.83□□□□□ -0.52
DDX1-201ENST00000233084 UBE2E1P51965 193 aa11.83□□□□□ -0.52
DDX1-201ENST00000233084 DPM3Q9P2X0 92 aa11.83□□□□□ -0.52
DDX1-201ENST00000233084 F5H697 171 aa11.82□□□□□ -0.52
DDX1-201ENST00000233084 C9orf153Q5TBE3 101 aa11.82□□□□□ -0.52
DDX1-201ENST00000233084 CLEC19AQ6UXS0 136 aa11.82□□□□□ -0.52
DDX1-201ENST00000233084 C9orf47Q6ZRZ4 202 aa11.82□□□□□ -0.52
DDX1-201ENST00000233084 CCL19Q99731 98 aa11.82□□□□□ -0.52
DDX1-201ENST00000233084 KLK5Q9Y337 293 aaPredicted RBP11.82□□□□□ -0.52
DDX1-201ENST00000233084 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.82□□□□□ -0.52
DDX1-201ENST00000233084 ECSCRQ19T08 205 aa11.82□□□□□ -0.52
DDX1-201ENST00000233084 ZNF876PQ49A33 203 aa11.82□□□□□ -0.52
DDX1-201ENST00000233084 NPBQ8NG41 125 aa11.82□□□□□ -0.52
DDX1-201ENST00000233084 ZNF256Q9Y2P7 627 aaPredicted RBP11.82□□□□□ -0.52
DDX1-201ENST00000233084 CSDC2Q9Y534 153 aaKnown RBP11.82□□□□□ -0.52
DDX1-201ENST00000233084 A0A087WWL8 130 aa11.81□□□□□ -0.52
DDX1-201ENST00000233084 CLPSL1A2RUU4 121 aa11.81□□□□□ -0.52
DDX1-201ENST00000233084 NRGNQ92686 78 aa11.81□□□□□ -0.52
DDX1-201ENST00000233084 RNASE4P34096 147 aaKnown RBP11.81□□□□□ -0.52
DDX1-201ENST00000233084 IGHV1-69DA0A0B4J2H0 117 aa11.8□□□□□ -0.52
DDX1-201ENST00000233084 TRBV30A0A0K0K1B3 111 aa11.8□□□□□ -0.52
DDX1-201ENST00000233084 ICOSQ9Y6W8 199 aa11.8□□□□□ -0.52
DDX1-201ENST00000233084 C20orf173Q96LM9 149 aa11.8□□□□□ -0.52
DDX1-201ENST00000233084 MED13LQ71F56 2210 aa11.8□□□□□ -0.52
DDX1-201ENST00000233084 M0R2P5 195 aa11.8□□□□□ -0.52
DDX1-201ENST00000233084 LEPROTO15243 131 aa11.8□□□□□ -0.52
DDX1-201ENST00000233084 EEF1AKMT3Q96AZ1 226 aa11.8□□□□□ -0.52
DDX1-201ENST00000233084 TMEM101Q96IK0 257 aa11.8□□□□□ -0.52
DDX1-201ENST00000233084 TRAV8-3A0A0A6YYJ7 113 aa11.79□□□□□ -0.52
DDX1-201ENST00000233084 TMEM141Q96I45 108 aa11.79□□□□□ -0.52
DDX1-201ENST00000233084 MUC4Q99102 2169 aa11.79□□□□□ -0.52
DDX1-201ENST00000233084 TMEM223A0PJW6 202 aa11.79□□□□□ -0.52
DDX1-201ENST00000233084 ZFHX3Q15911 3703 aa11.79□□□□□ -0.52
DDX1-201ENST00000233084 TRAV21A0A0B4J279 112 aa11.78□□□□□ -0.52
DDX1-201ENST00000233084 SDHAF1A6NFY7 115 aa11.78□□□□□ -0.52
DDX1-201ENST00000233084 FASNP49327 2511 aaKnown RBP11.78□□□□□ -0.52
DDX1-201ENST00000233084 A0A0J9YXY3 114 aa11.78□□□□□ -0.52
DDX1-201ENST00000233084 FAM74A4Q5TZK3 123 aa11.78□□□□□ -0.52
DDX1-201ENST00000233084 SUMO4Q6EEV6 95 aa11.78□□□□□ -0.52
DDX1-201ENST00000233084 ZFAND2AQ8N6M9 145 aa11.78□□□□□ -0.52
DDX1-201ENST00000233084 TIMM17AQ99595 171 aa11.78□□□□□ -0.52
DDX1-201ENST00000233084 IGKV3-7A0A075B6H7 116 aa11.77□□□□□ -0.52
DDX1-201ENST00000233084 A0A0J9YXV3 536 aa11.77□□□□□ -0.52
DDX1-201ENST00000233084 F6UB75 175 aa11.77□□□□□ -0.52
DDX1-201ENST00000233084 PPP1R17O96001 155 aa11.77□□□□□ -0.52
DDX1-201ENST00000233084 KRTAP10-9P60411 292 aa11.77□□□□□ -0.52
DDX1-201ENST00000233084 METTL26Q96S19 204 aa11.77□□□□□ -0.52
DDX1-201ENST00000233084 TRBV7-7A0A0K0K1E9 115 aa11.77□□□□□ -0.53
DDX1-201ENST00000233084 RNASE3P12724 160 aaKnown RBP11.77□□□□□ -0.53
DDX1-201ENST00000233084 SPXQ9BT56 116 aa11.77□□□□□ -0.53
DDX1-201ENST00000233084 VCYO14598 125 aa11.76□□□□□ -0.53
DDX1-201ENST00000233084 COX6CP09669 75 aa11.76□□□□□ -0.53
DDX1-201ENST00000233084 POLR2KP53803 58 aaKnown RBP11.76□□□□□ -0.53
DDX1-201ENST00000233084 IGHV7-81A0A0B4J1V7 117 aa11.76□□□□□ -0.53
DDX1-201ENST00000233084 H3BT86 120 aa11.76□□□□□ -0.53
DDX1-201ENST00000233084 NDUFA7O95182 113 aa11.76□□□□□ -0.53
DDX1-201ENST00000233084 HERVK_113P63121 156 aa11.76□□□□□ -0.53
DDX1-201ENST00000233084 EBI3Q14213 229 aa11.76□□□□□ -0.53
DDX1-201ENST00000233084 DNAJC30Q96LL9 226 aa11.76□□□□□ -0.53
DDX1-201ENST00000233084 LINC00527Q9UJ94 153 aa11.76□□□□□ -0.53
DDX1-201ENST00000233084 ABCA2Q9BZC7 2435 aa11.75□□□□□ -0.53
DDX1-201ENST00000233084 NPFFO15130 113 aa11.75□□□□□ -0.53
DDX1-201ENST00000233084 ADAMTSL4-AS1Q5T5F5 129 aa11.75□□□□□ -0.53
DDX1-201ENST00000233084 HIST2H2BCQ6DN03 193 aa11.75□□□□□ -0.53
DDX1-201ENST00000233084 POM121L12Q8N7R1 296 aa11.75□□□□□ -0.53
DDX1-201ENST00000233084 CCDC140Q96MF4 163 aa11.75□□□□□ -0.53
DDX1-201ENST00000233084 BPESC1Q9GZL8 116 aa11.75□□□□□ -0.53
DDX1-201ENST00000233084 LINC00315P59091 139 aa11.74□□□□□ -0.53
DDX1-201ENST00000233084 C3orf22Q8N5N4 141 aa11.74□□□□□ -0.53
DDX1-201ENST00000233084 DUX5Q96PT3 197 aa11.74□□□□□ -0.53
DDX1-201ENST00000233084 NAV2Q8IVL1 2488 aa11.74□□□□□ -0.53
DDX1-201ENST00000233084 FAM240AA0A1B0GVK7 77 aa11.73□□□□□ -0.53
DDX1-201ENST00000233084 G3V318 75 aa11.73□□□□□ -0.53
DDX1-201ENST00000233084 VMO1Q7Z5L0 202 aa11.73□□□□□ -0.53
DDX1-201ENST00000233084 LINC01600Q96MT4 127 aa11.73□□□□□ -0.53
DDX1-201ENST00000233084 PRRC2AP48634 2157 aaKnown RBP11.73□□□□□ -0.53
DDX1-201ENST00000233084 I3L3M4 83 aa11.73□□□□□ -0.53
DDX1-201ENST00000233084 RPL11P62913 178 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms