RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 MRPL16Q9NX20 251 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-201ENST00000216840 LBHQ53QV2 105 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-201ENST00000216840 CFAP126Q5VTH2 177 aa12.48□□□□□ -0.41
RABGGTA-201ENST00000216840 ZFP2Q6ZN57 461 aa12.48□□□□□ -0.41
RABGGTA-201ENST00000216840 IL17DQ8TAD2 202 aa12.48□□□□□ -0.41
RABGGTA-201ENST00000216840 KIR2DL4Q99706 377 aa12.48□□□□□ -0.41
RABGGTA-201ENST00000216840 C2orf88Q9BSF0 95 aa12.48□□□□□ -0.41
RABGGTA-201ENST00000216840 TP73-AS1Q9UF72 201 aa12.48□□□□□ -0.41
RABGGTA-201ENST00000216840 ANKRD39Q53RE8 183 aa12.47□□□□□ -0.41
RABGGTA-201ENST00000216840 SPATA3Q8NHX4 192 aa12.47□□□□□ -0.41
RABGGTA-201ENST00000216840 DEFB104AQ8WTQ1 72 aa12.47□□□□□ -0.41
RABGGTA-201ENST00000216840 CITED1Q99966 193 aa12.47□□□□□ -0.41
RABGGTA-201ENST00000216840 STPG4Q8N801 248 aa12.47□□□□□ -0.41
RABGGTA-201ENST00000216840 H7C1H1 209 aa12.46□□□□□ -0.41
RABGGTA-201ENST00000216840 SLC25A34Q6PIV7 304 aa12.46□□□□□ -0.41
RABGGTA-201ENST00000216840 RNASE8Q8TDE3 154 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-201ENST00000216840 MRPS16Q9Y3D3 137 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-201ENST00000216840 RS1O15537 224 aa12.46□□□□□ -0.42
RABGGTA-201ENST00000216840 F8P00451 2351 aa12.45□□□□□ -0.42
RABGGTA-201ENST00000216840 A0A087WX48 190 aa12.45□□□□□ -0.42
RABGGTA-201ENST00000216840 G0S2P27469 103 aa12.45□□□□□ -0.42
RABGGTA-201ENST00000216840 Q6ZSN1 163 aa12.45□□□□□ -0.42
RABGGTA-201ENST00000216840 LURAP1LQ8IV03 231 aa12.45□□□□□ -0.42
RABGGTA-201ENST00000216840 CYSLTR1Q9Y271 337 aa12.45□□□□□ -0.42
RABGGTA-201ENST00000216840 TRAV12-1A0A0B4J245 112 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 IGKCP01834 107 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 P0DMU3 169 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 FAM231AP0DMU4 169 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 FAM231CP0DMU5 169 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 COX8AP10176 69 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 INSL3P51460 131 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 RIPPLY3P57055 190 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 ERASQ7Z444 233 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 CSNK1G2-AS1Q8NCQ2 148 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 TMEM263Q8WUH6 116 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 MRPL35Q9NZE8 188 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 FLNBO75369 2602 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 RHODO00212 210 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 DPM2O94777 84 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 NEXN-AS1Q8NBZ9 246 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 C1QTNF4Q9BXJ3 329 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 HHLA3Q9XRX5 114 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 TP53TG1Q9Y2A0 90 aa12.44□□□□□ -0.42
RABGGTA-201ENST00000216840 TSHBP01222 138 aa12.43□□□□□ -0.42
RABGGTA-201ENST00000216840 C9orf66Q5T8R8 295 aa12.43□□□□□ -0.42
RABGGTA-201ENST00000216840 TENM1Q9UKZ4 2725 aa12.43□□□□□ -0.42
RABGGTA-201ENST00000216840 LINC01549A6NIU2 74 aa12.42□□□□□ -0.42
RABGGTA-201ENST00000216840 I3L3M4 83 aa12.42□□□□□ -0.42
RABGGTA-201ENST00000216840 BAALCQ8WXS3 180 aa12.42□□□□□ -0.42
RABGGTA-201ENST00000216840 RPL39P62891 51 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-201ENST00000216840 RHOHQ15669 191 aa12.42□□□□□ -0.42
RABGGTA-201ENST00000216840 TRGV1A0A0A0MS02 117 aa12.41□□□□□ -0.42
RABGGTA-201ENST00000216840 IGIPA6NJ69 53 aa12.41□□□□□ -0.42
RABGGTA-201ENST00000216840 TCTAP57738 103 aa12.41□□□□□ -0.42
RABGGTA-201ENST00000216840 NOTCH3Q9UM47 2321 aa12.41□□□□□ -0.42
RABGGTA-201ENST00000216840 IGHV3-53P01767 116 aa12.41□□□□□ -0.42
RABGGTA-201ENST00000216840 FGF6P10767 208 aa12.41□□□□□ -0.42
RABGGTA-201ENST00000216840 Q9UF83 564 aa12.41□□□□□ -0.42
RABGGTA-201ENST00000216840 F8VRH5 84 aa12.4□□□□□ -0.42
RABGGTA-201ENST00000216840 BATFQ16520 125 aa12.4□□□□□ -0.42
RABGGTA-201ENST00000216840 GTSCR1Q86UQ5 136 aa12.4□□□□□ -0.42
RABGGTA-201ENST00000216840 CHTOPQ9Y3Y2 248 aaKnown RBP12.4□□□□□ -0.42
RABGGTA-201ENST00000216840 TNFRSF18Q9Y5U5 241 aa12.4□□□□□ -0.42
RABGGTA-201ENST00000216840 VWFP04275 2813 aa12.4□□□□□ -0.42
RABGGTA-201ENST00000216840 TEP1Q99973 2627 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-201ENST00000216840 A0A1B0GV90 55 aa12.39□□□□□ -0.43
RABGGTA-201ENST00000216840 PLAC8L1A1L4L8 177 aa12.39□□□□□ -0.43
RABGGTA-201ENST00000216840 Q6ZTI0 123 aa12.39□□□□□ -0.43
RABGGTA-201ENST00000216840 PLNP26678 52 aa12.39□□□□□ -0.43
RABGGTA-201ENST00000216840 C16orf74Q96GX8 76 aa12.39□□□□□ -0.43
RABGGTA-201ENST00000216840 TMEM141Q96I45 108 aa12.39□□□□□ -0.43
RABGGTA-201ENST00000216840 ATRQ13535 2644 aa12.38□□□□□ -0.43
RABGGTA-201ENST00000216840 PRSS29PA6NIE9 313 aa12.38□□□□□ -0.43
RABGGTA-201ENST00000216840 DAZ2Q13117 558 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-201ENST00000216840 OR4C5Q8NGB2 326 aa12.38□□□□□ -0.43
RABGGTA-201ENST00000216840 TIMM17AQ99595 171 aa12.38□□□□□ -0.43
RABGGTA-201ENST00000216840 ZC2HC1BQ5TFG8 222 aa12.38□□□□□ -0.43
RABGGTA-201ENST00000216840 BOD1L2Q8IYS8 172 aa12.38□□□□□ -0.43
RABGGTA-201ENST00000216840 NOP10Q9NPE3 64 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-201ENST00000216840 NMUP48645 174 aa12.37□□□□□ -0.43
RABGGTA-201ENST00000216840 HINT1P49773 126 aaPredicted RBP12.37□□□□□ -0.43
RABGGTA-201ENST00000216840 C2orf91Q6ZV80 131 aa12.37□□□□□ -0.43
RABGGTA-201ENST00000216840 C20orf203Q8NBC4 194 aa12.37□□□□□ -0.43
RABGGTA-201ENST00000216840 DNAJC30Q96LL9 226 aa12.37□□□□□ -0.43
RABGGTA-201ENST00000216840 IGKV2D-26A0A0A0MRZ7 120 aa12.36□□□□□ -0.43
RABGGTA-201ENST00000216840 RRN3P1Q2M238 152 aa12.36□□□□□ -0.43
RABGGTA-201ENST00000216840 ZNF479Q96JC4 524 aa12.36□□□□□ -0.43
RABGGTA-201ENST00000216840 PCP2Q8IVA1 136 aa12.36□□□□□ -0.43
RABGGTA-201ENST00000216840 LINC00469Q8N7U9 141 aa12.36□□□□□ -0.43
RABGGTA-201ENST00000216840 TRAV4A0A0B4J268 109 aa12.35□□□□□ -0.43
RABGGTA-201ENST00000216840 DLEU1O43261 78 aa12.35□□□□□ -0.43
RABGGTA-201ENST00000216840 PMVKQ15126 192 aa12.34□□□□□ -0.43
RABGGTA-201ENST00000216840 OVOL2Q9BRP0 275 aa12.34□□□□□ -0.43
RABGGTA-201ENST00000216840 WFDC9Q8NEX5 89 aa12.34□□□□□ -0.43
RABGGTA-201ENST00000216840 CST9LQ9H4G1 147 aa12.33□□□□□ -0.44
RABGGTA-201ENST00000216840 MPV17L2Q567V2 206 aa12.33□□□□□ -0.44
RABGGTA-201ENST00000216840 COL5A1-AS1Q5SY13 56 aa12.33□□□□□ -0.44
RABGGTA-201ENST00000216840 CYSRT1A8MQ03 144 aa12.32□□□□□ -0.44
RABGGTA-201ENST00000216840 IGLV4-69A0A075B6H9 119 aa12.31□□□□□ -0.44
RABGGTA-201ENST00000216840 OPRPNQ99935 248 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms