RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 FXYD2P54710 66 aa11.42□□□□□ -0.58
SPTLC2-201ENST00000216484 KLK5Q9Y337 293 aaPredicted RBP11.42□□□□□ -0.58
SPTLC2-201ENST00000216484 SCXQ7RTU7 201 aa11.42□□□□□ -0.58
SPTLC2-201ENST00000216484 IGKV2-24A0A0C4DH68 120 aa11.41□□□□□ -0.58
SPTLC2-201ENST00000216484 VPREB3Q9UKI3 123 aa11.4□□□□□ -0.58
SPTLC2-201ENST00000216484 HIGD2AQ9BW72 106 aa11.4□□□□□ -0.58
SPTLC2-201ENST00000216484 DEFB4AO15263 64 aa11.39□□□□□ -0.59
SPTLC2-201ENST00000216484 CD59P13987 128 aa11.39□□□□□ -0.59
SPTLC2-201ENST00000216484 KIR2DL5BQ8NHK3 375 aa11.39□□□□□ -0.59
SPTLC2-201ENST00000216484 A0A0J9YXV3 536 aa11.39□□□□□ -0.59
SPTLC2-201ENST00000216484 PRR30Q53SZ7 412 aaPredicted RBP11.39□□□□□ -0.59
SPTLC2-201ENST00000216484 CDPF1Q6NVV7 123 aa11.39□□□□□ -0.59
SPTLC2-201ENST00000216484 LOXL1Q08397 574 aaPredicted RBP11.39□□□□□ -0.59
SPTLC2-201ENST00000216484 ENHOQ6UWT2 76 aa11.39□□□□□ -0.59
SPTLC2-201ENST00000216484 UQCRQO14949 82 aa11.39□□□□□ -0.59
SPTLC2-201ENST00000216484 FLVCR1-AS1Q8TAF5 88 aa11.38□□□□□ -0.59
SPTLC2-201ENST00000216484 LOXP28300 417 aaPredicted RBP11.38□□□□□ -0.59
SPTLC2-201ENST00000216484 TMEM263Q8WUH6 116 aaKnown RBP11.38□□□□□ -0.59
SPTLC2-201ENST00000216484 TDRG1Q3Y452 100 aa11.38□□□□□ -0.59
SPTLC2-201ENST00000216484 LINC00643Q86TS7 51 aa11.38□□□□□ -0.59
SPTLC2-201ENST00000216484 DIAPH2-AS1Q14236 149 aa11.37□□□□□ -0.59
SPTLC2-201ENST00000216484 C9orf85Q96MD7 179 aa11.37□□□□□ -0.59
SPTLC2-201ENST00000216484 MYO18BQ8IUG5 2567 aa11.37□□□□□ -0.59
SPTLC2-201ENST00000216484 IGLC6P0CF74 106 aa11.36□□□□□ -0.59
SPTLC2-201ENST00000216484 Q8N9W7 124 aa11.36□□□□□ -0.59
SPTLC2-201ENST00000216484 SNURFQ9Y675 71 aa11.36□□□□□ -0.59
SPTLC2-201ENST00000216484 IGKV1D-37A0A075B6S9 117 aa11.36□□□□□ -0.59
SPTLC2-201ENST00000216484 TOMM6Q96B49 74 aa11.36□□□□□ -0.59
SPTLC2-201ENST00000216484 AGPAT4-IT1Q9H0P7 198 aa11.36□□□□□ -0.59
SPTLC2-201ENST00000216484 SIRPDQ9H106 197 aa11.36□□□□□ -0.59
SPTLC2-201ENST00000216484 HIVEP2P31629 2446 aa11.36□□□□□ -0.59
SPTLC2-201ENST00000216484 C16orf54Q6UWD8 224 aa11.36□□□□□ -0.59
SPTLC2-201ENST00000216484 H3BT86 120 aa11.36□□□□□ -0.59
SPTLC2-201ENST00000216484 LENEPQ9Y5L5 61 aa11.36□□□□□ -0.59
SPTLC2-201ENST00000216484 A0A087WZ39 114 aa11.36□□□□□ -0.59
SPTLC2-201ENST00000216484 SPANXB1Q9NS25 103 aaPredicted RBP11.35□□□□□ -0.59
SPTLC2-201ENST00000216484 CSRP3P50461 194 aa11.35□□□□□ -0.59
SPTLC2-201ENST00000216484 IGHV1-58A0A0C4DH39 117 aa11.35□□□□□ -0.59
SPTLC2-201ENST00000216484 DEFB135Q30KP9 77 aa11.35□□□□□ -0.59
SPTLC2-201ENST00000216484 RNASE8Q8TDE3 154 aaKnown RBP11.35□□□□□ -0.59
SPTLC2-201ENST00000216484 C10orf91Q5T1B1 145 aa11.35□□□□□ -0.59
SPTLC2-201ENST00000216484 ADAMTS20P59510 1910 aa11.35□□□□□ -0.59
SPTLC2-201ENST00000216484 CENPVL3A0A0U1RRI6 287 aa11.35□□□□□ -0.59
SPTLC2-201ENST00000216484 H3BUA1 57 aa11.34□□□□□ -0.59
SPTLC2-201ENST00000216484 LINC00173Q6ZV60 143 aa11.34□□□□□ -0.59
SPTLC2-201ENST00000216484 PTH2Q96A98 100 aa11.34□□□□□ -0.59
SPTLC2-201ENST00000216484 Q8N1Y9 231 aa11.34□□□□□ -0.59
SPTLC2-201ENST00000216484 UBE2D4Q9Y2X8 147 aa11.34□□□□□ -0.59
SPTLC2-201ENST00000216484 HRCT1Q6UXD1 115 aa11.34□□□□□ -0.59
SPTLC2-201ENST00000216484 C1orf195Q5TG92 126 aa11.34□□□□□ -0.59
SPTLC2-201ENST00000216484 LYPD6BQ8NI32 183 aa11.34□□□□□ -0.59
SPTLC2-201ENST00000216484 TCL1BO95988 128 aa11.34□□□□□ -0.59
SPTLC2-201ENST00000216484 ATP5EP56381 51 aaPredicted RBP11.33□□□□□ -0.6
SPTLC2-201ENST00000216484 DEFB112Q30KQ8 113 aa11.33□□□□□ -0.6
SPTLC2-201ENST00000216484 E9PLD3 99 aa11.33□□□□□ -0.6
SPTLC2-201ENST00000216484 C14orf177Q52M58 125 aa11.33□□□□□ -0.6
SPTLC2-201ENST00000216484 SERP2Q8N6R1 65 aa11.33□□□□□ -0.6
SPTLC2-201ENST00000216484 C3orf84H3BNL1 204 aa11.33□□□□□ -0.6
SPTLC2-201ENST00000216484 ZFAND3Q9H8U3 227 aa11.33□□□□□ -0.6
SPTLC2-201ENST00000216484 IGKV1-17P01599 117 aa11.32□□□□□ -0.6
SPTLC2-201ENST00000216484 SPINK6Q6UWN8 80 aa11.32□□□□□ -0.6
SPTLC2-201ENST00000216484 Q8TCH9 128 aa11.32□□□□□ -0.6
SPTLC2-201ENST00000216484 IGHV4-61A0A0C4DH41 118 aa11.32□□□□□ -0.6
SPTLC2-201ENST00000216484 B3GALT5-AS1P59052 145 aa11.32□□□□□ -0.6
SPTLC2-201ENST00000216484 NDUFC1O43677 76 aa11.31□□□□□ -0.6
SPTLC2-201ENST00000216484 CPAMD8Q8IZJ3 1885 aa11.31□□□□□ -0.6
SPTLC2-201ENST00000216484 TIMM17BO60830 172 aa11.31□□□□□ -0.6
SPTLC2-201ENST00000216484 IGHV4-38-2P0DP08 117 aa11.31□□□□□ -0.6
SPTLC2-201ENST00000216484 C1orf158Q8N1D5 194 aa11.31□□□□□ -0.6
SPTLC2-201ENST00000216484 C10orf105Q8TEF2 133 aa11.31□□□□□ -0.6
SPTLC2-201ENST00000216484 C11orf86A6NJI1 115 aa11.31□□□□□ -0.6
SPTLC2-201ENST00000216484 Q6ZS92 163 aa11.31□□□□□ -0.6
SPTLC2-201ENST00000216484 LINC00311Q8N616 119 aa11.3□□□□□ -0.6
SPTLC2-201ENST00000216484 RETNQ9HD89 108 aa11.3□□□□□ -0.6
SPTLC2-201ENST00000216484 UBE2D1P51668 147 aa11.3□□□□□ -0.6
SPTLC2-201ENST00000216484 FAM19A1Q7Z5A9 133 aa11.29□□□□□ -0.6
SPTLC2-201ENST00000216484 NFE4Q86UQ8 179 aa11.29□□□□□ -0.6
SPTLC2-201ENST00000216484 HIGD1BQ9P298 99 aa11.29□□□□□ -0.6
SPTLC2-201ENST00000216484 MIAQ16674 131 aa11.29□□□□□ -0.6
SPTLC2-201ENST00000216484 C15orf65H3BRN8 121 aa11.29□□□□□ -0.6
SPTLC2-201ENST00000216484 NDUFA11Q86Y39 141 aa11.29□□□□□ -0.6
SPTLC2-201ENST00000216484 PMAIP1Q13794 54 aa11.29□□□□□ -0.6
SPTLC2-201ENST00000216484 MSRB1Q9NZV6 116 aa11.29□□□□□ -0.6
SPTLC2-201ENST00000216484 UBE2D3P61077 147 aa11.28□□□□□ -0.6
SPTLC2-201ENST00000216484 MT-ATP8P03928 68 aa11.28□□□□□ -0.6
SPTLC2-201ENST00000216484 Q8N9L7 120 aa11.28□□□□□ -0.6
SPTLC2-201ENST00000216484 SLPIP03973 132 aa11.28□□□□□ -0.6
SPTLC2-201ENST00000216484 LINC00269Q8N2A0 174 aa11.28□□□□□ -0.6
SPTLC2-201ENST00000216484 PRYO14603 147 aa11.27□□□□□ -0.6
SPTLC2-201ENST00000216484 VWCEQ96DN2 955 aa11.27□□□□□ -0.6
SPTLC2-201ENST00000216484 COL5A1P20908 1838 aaPredicted RBP11.27□□□□□ -0.6
SPTLC2-201ENST00000216484 TTC28Q96AY4 2481 aa11.27□□□□□ -0.61
SPTLC2-201ENST00000216484 C20orf173Q96LM9 149 aa11.26□□□□□ -0.61
SPTLC2-201ENST00000216484 TTTY13Q9BZ97 58 aa11.26□□□□□ -0.61
SPTLC2-201ENST00000216484 X6R8D5 127 aa11.26□□□□□ -0.61
SPTLC2-201ENST00000216484 K7ENP7 123 aa11.26□□□□□ -0.61
SPTLC2-201ENST00000216484 Q6ZR03 302 aa11.26□□□□□ -0.61
SPTLC2-201ENST00000216484 Q6ZVQ6 151 aa11.26□□□□□ -0.61
SPTLC2-201ENST00000216484 WT1P19544 449 aaPredicted RBP11.26□□□□□ -0.61
SPTLC2-201ENST00000216484 AJUBAQ96IF1 538 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms