RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 PHLDA3Q9Y5J5 127 aa13.37□□□□□ -0.27
CLN6-222ENST00000637667 SMLR1H3BR10 107 aa13.36□□□□□ -0.27
CLN6-222ENST00000637667 INAFM2P0DMQ5 153 aa13.36□□□□□ -0.27
CLN6-222ENST00000637667 AKR1C3P42330 323 aa13.36□□□□□ -0.27
CLN6-222ENST00000637667 FAM74A4Q5TZK3 123 aa13.36□□□□□ -0.27
CLN6-222ENST00000637667 TMEM70Q9BUB7 260 aa13.36□□□□□ -0.27
CLN6-222ENST00000637667 FLG2Q5D862 2391 aaPredicted RBP13.36□□□□□ -0.27
CLN6-222ENST00000637667 A0A087WWL8 130 aa13.35□□□□□ -0.27
CLN6-222ENST00000637667 TMSB15BA0A087X1C1 80 aa13.35□□□□□ -0.27
CLN6-222ENST00000637667 TRAV8-3A0A0A6YYJ7 113 aa13.35□□□□□ -0.27
CLN6-222ENST00000637667 TPT1P13693 172 aaKnown RBP13.35□□□□□ -0.27
CLN6-222ENST00000637667 HAMPP81172 84 aa13.35□□□□□ -0.27
CLN6-222ENST00000637667 DAZ4Q86SG3 579 aaKnown RBP13.35□□□□□ -0.27
CLN6-222ENST00000637667 SFRP2Q96HF1 295 aa13.35□□□□□ -0.27
CLN6-222ENST00000637667 DAZ3Q9NR90 486 aaKnown RBP13.35□□□□□ -0.27
CLN6-222ENST00000637667 M0R381 172 aa13.34□□□□□ -0.27
CLN6-222ENST00000637667 SMR3BP02814 79 aaPredicted RBP13.34□□□□□ -0.27
CLN6-222ENST00000637667 TOR2AQ5JU69 321 aa13.34□□□□□ -0.27
CLN6-222ENST00000637667 KCNRGQ8N5I3 272 aa13.34□□□□□ -0.27
CLN6-222ENST00000637667 PAGE4O60829 102 aa13.33□□□□□ -0.28
CLN6-222ENST00000637667 WFDC2Q14508 124 aa13.33□□□□□ -0.28
CLN6-222ENST00000637667 ZFP82Q8N141 532 aa13.33□□□□□ -0.28
CLN6-222ENST00000637667 VPS13BQ7Z7G8 4022 aa13.33□□□□□ -0.28
CLN6-222ENST00000637667 ZNF345Q14585 488 aa13.32□□□□□ -0.28
CLN6-222ENST00000637667 SFT2D1Q8WV19 159 aa13.32□□□□□ -0.28
CLN6-222ENST00000637667 SRRM2Q9UQ35 2752 aaKnown RBP13.31□□□□□ -0.28
CLN6-222ENST00000637667 SEC11BP0C7V7 166 aa13.31□□□□□ -0.28
CLN6-222ENST00000637667 FAM213BQ8TBF2 198 aa13.31□□□□□ -0.28
CLN6-222ENST00000637667 MBD3L1Q8WWY6 194 aa13.31□□□□□ -0.28
CLN6-222ENST00000637667 UMAD1C9J7I0 102 aa13.3□□□□□ -0.28
CLN6-222ENST00000637667 S100A9P06702 114 aaKnown RBP13.3□□□□□ -0.28
CLN6-222ENST00000637667 NIT1Q86X76 327 aa13.3□□□□□ -0.28
CLN6-222ENST00000637667 URGCP-MRPS24S4R325 110 aa13.3□□□□□ -0.28
CLN6-222ENST00000637667 HERC1Q15751 4861 aa13.29□□□□□ -0.28
CLN6-222ENST00000637667 TRBV10-1A0A0K0K1A3 114 aa13.29□□□□□ -0.28
CLN6-222ENST00000637667 A0A1B0GV50 99 aa13.29□□□□□ -0.28
CLN6-222ENST00000637667 LECT2O14960 151 aa13.29□□□□□ -0.28
CLN6-222ENST00000637667 FAM30AQ9NZY2 134 aa13.29□□□□□ -0.28
CLN6-222ENST00000637667 COX11Q9Y6N1 276 aa13.29□□□□□ -0.28
CLN6-222ENST00000637667 DNAH8Q96JB1 4490 aa13.29□□□□□ -0.28
CLN6-222ENST00000637667 SCO2A0A1W2PP80 73 aa13.28□□□□□ -0.28
CLN6-222ENST00000637667 FAM229AH3BQW9 127 aa13.28□□□□□ -0.28
CLN6-222ENST00000637667 C1QBP02746 253 aa13.28□□□□□ -0.28
CLN6-222ENST00000637667 RPL36AP83881 106 aaKnown RBP13.28□□□□□ -0.28
CLN6-222ENST00000637667 RPL36ALQ969Q0 106 aaKnown RBP13.28□□□□□ -0.28
CLN6-222ENST00000637667 RMI2Q96E14 147 aa13.28□□□□□ -0.28
CLN6-222ENST00000637667 ZNF471Q9BX82 626 aaPredicted RBP13.28□□□□□ -0.28
CLN6-222ENST00000637667 A0A0D9SG52 128 aa13.27□□□□□ -0.29
CLN6-222ENST00000637667 HMSDA8MTL9 139 aa13.27□□□□□ -0.29
CLN6-222ENST00000637667 PFDN1O60925 122 aa13.27□□□□□ -0.29
CLN6-222ENST00000637667 UBE2D3P61077 147 aa13.27□□□□□ -0.29
CLN6-222ENST00000637667 UBE2D2P62837 147 aa13.27□□□□□ -0.29
CLN6-222ENST00000637667 RPL19P84098 196 aaKnown RBP13.27□□□□□ -0.29
CLN6-222ENST00000637667 BAGE2Q86Y30 109 aa13.27□□□□□ -0.29
CLN6-222ENST00000637667 TRBV7-3A0A075B6L6 115 aa13.26□□□□□ -0.29
CLN6-222ENST00000637667 KANTRA0A1W2PQU2 76 aa13.26□□□□□ -0.29
CLN6-222ENST00000637667 BCL2L11O43521 198 aa13.26□□□□□ -0.29
CLN6-222ENST00000637667 CXCL1P09341 107 aa13.26□□□□□ -0.29
CLN6-222ENST00000637667 OR10AG1Q8NH19 301 aa13.26□□□□□ -0.29
CLN6-222ENST00000637667 BAALCQ8WXS3 180 aa13.26□□□□□ -0.29
CLN6-222ENST00000637667 MLST8Q9BVC4 326 aa13.26□□□□□ -0.29
CLN6-222ENST00000637667 KLK12Q9UKR0 248 aa13.26□□□□□ -0.29
CLN6-222ENST00000637667 A0A087WX48 190 aa13.25□□□□□ -0.29
CLN6-222ENST00000637667 OR10G8Q8NGN5 311 aa13.25□□□□□ -0.29
CLN6-222ENST00000637667 DNAJC30Q96LL9 226 aa13.25□□□□□ -0.29
CLN6-222ENST00000637667 CHCHD7Q9BUK0 85 aa13.25□□□□□ -0.29
CLN6-222ENST00000637667 MYCBP2O75592 4640 aa13.25□□□□□ -0.29
CLN6-222ENST00000637667 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.24□□□□□ -0.29
CLN6-222ENST00000637667 IGKV2D-24A0A075B6R9 120 aa13.24□□□□□ -0.29
CLN6-222ENST00000637667 H2AFB1P0C5Y9 115 aa13.24□□□□□ -0.29
CLN6-222ENST00000637667 RAB4BP61018 213 aa13.24□□□□□ -0.29
CLN6-222ENST00000637667 EIF5AP63241 154 aaKnown RBP13.23□□□□□ -0.29
CLN6-222ENST00000637667 ELOBQ15370 118 aa13.23□□□□□ -0.29
CLN6-222ENST00000637667 ZNF56Q15929 161 aa13.23□□□□□ -0.29
CLN6-222ENST00000637667 KCNIP4Q6PIL6 250 aa13.23□□□□□ -0.29
CLN6-222ENST00000637667 Q6ZSA8 131 aa13.23□□□□□ -0.29
CLN6-222ENST00000637667 UBE2WQ96B02 151 aa13.23□□□□□ -0.29
CLN6-222ENST00000637667 SNAI2O43623 268 aa13.22□□□□□ -0.29
CLN6-222ENST00000637667 PRR27Q6MZM9 219 aa13.22□□□□□ -0.29
CLN6-222ENST00000637667 SSBP4Q9BWG4 385 aaPredicted RBP13.22□□□□□ -0.29
CLN6-222ENST00000637667 MUC21A0A0G2JKD1 596 aa13.21□□□□□ -0.29
CLN6-222ENST00000637667 MUC21A0A140T8X8 626 aa13.21□□□□□ -0.29
CLN6-222ENST00000637667 OR5AL1P0C617 328 aa13.21□□□□□ -0.29
CLN6-222ENST00000637667 TMUB2Q71RG4 321 aa13.21□□□□□ -0.29
CLN6-222ENST00000637667 Q8N976 141 aa13.21□□□□□ -0.29
CLN6-222ENST00000637667 NEXN-AS1Q8NBZ9 246 aa13.21□□□□□ -0.29
CLN6-222ENST00000637667 TRBV6-8A0A0A6YYG3 113 aa13.2□□□□□ -0.3
CLN6-222ENST00000637667 SPANXN1Q5VSR9 72 aa13.2□□□□□ -0.3
CLN6-222ENST00000637667 TMEM262E9PQX1 116 aa13.19□□□□□ -0.3
CLN6-222ENST00000637667 RPL35P42766 123 aaKnown RBP13.19□□□□□ -0.3
CLN6-222ENST00000637667 ATRAIDQ6UW56 229 aa13.19□□□□□ -0.3
CLN6-222ENST00000637667 RBFOX3A6NFN3 312 aa13.18□□□□□ -0.3
CLN6-222ENST00000637667 CCL20P78556 96 aa13.18□□□□□ -0.3
CLN6-222ENST00000637667 Q0VG73 95 aa13.18□□□□□ -0.3
CLN6-222ENST00000637667 LINC01620Q4KN68 170 aa13.18□□□□□ -0.3
CLN6-222ENST00000637667 C11orf52Q96A22 123 aa13.18□□□□□ -0.3
CLN6-222ENST00000637667 MANBALQ9NQG1 85 aa13.18□□□□□ -0.3
CLN6-222ENST00000637667 GNG13Q9P2W3 67 aa13.18□□□□□ -0.3
CLN6-222ENST00000637667 F5H697 171 aa13.17□□□□□ -0.3
CLN6-222ENST00000637667 SSTP61278 116 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms