RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PSMB8P28062 276 aa13.8□□□□□ -0.2
CACNA1A-227ENST00000636549 V9GYV3 84 aa13.8□□□□□ -0.2
CACNA1A-227ENST00000636549 DEFB131BA0A096LNP1 70 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 C12orf74Q32Q52 190 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 IGFL3Q6UXB1 125 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 C9orf85Q96MD7 179 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 IGLV9-49A0A0B4J1Y8 123 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 ZGRF1Q86YA3 2104 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 PRAC2D3DTV9 90 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 DAZ2Q13117 558 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 DAZ4Q86SG3 579 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 DAZ3Q9NR90 486 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 PYY3Q5JQD4 70 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 TRBV6-6A0A0A6YYG2 114 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 ZNF493Q6ZR52 646 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 TP53TG3Q9ULZ0 132 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 X6R8D5 127 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 IGHV7-81A0A0B4J1V7 117 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 C4orf3Q8WVX3 66 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 PLA2G2EQ9NZK7 142 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 MGAMO43451 1857 aa13.79□□□□□ -0.2
CACNA1A-227ENST00000636549 K7EN84 100 aa13.78□□□□□ -0.2
CACNA1A-227ENST00000636549 Q8N9W7 124 aa13.78□□□□□ -0.2
CACNA1A-227ENST00000636549 DIRC1Q969H9 104 aa13.78□□□□□ -0.2
CACNA1A-227ENST00000636549 C9JQL5 133 aa13.78□□□□□ -0.2
CACNA1A-227ENST00000636549 ZNF524Q96C55 264 aa13.77□□□□□ -0.2
CACNA1A-227ENST00000636549 A0A1W2PPM0 123 aa13.77□□□□□ -0.2
CACNA1A-227ENST00000636549 HERV-K104P63124 156 aa13.77□□□□□ -0.2
CACNA1A-227ENST00000636549 C5orf56Q8N8D9 126 aa13.77□□□□□ -0.2
CACNA1A-227ENST00000636549 PRSS47A8MTI9 375 aa13.77□□□□□ -0.21
CACNA1A-227ENST00000636549 MDFICQ9P1T7 246 aa13.77□□□□□ -0.21
CACNA1A-227ENST00000636549 C10orf105Q8TEF2 133 aa13.77□□□□□ -0.21
CACNA1A-227ENST00000636549 LY96Q9Y6Y9 160 aa13.77□□□□□ -0.21
CACNA1A-227ENST00000636549 LYL1P12980 280 aa13.76□□□□□ -0.21
CACNA1A-227ENST00000636549 TRBV7-3A0A075B6L6 115 aa13.76□□□□□ -0.21
CACNA1A-227ENST00000636549 WI2-2373I1.2A0A1W2PRP0 233 aa13.76□□□□□ -0.21
CACNA1A-227ENST00000636549 TMEM263Q8WUH6 116 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-227ENST00000636549 LINC00526Q96FQ7 95 aa13.76□□□□□ -0.21
CACNA1A-227ENST00000636549 IGLC7A0M8Q6 106 aa13.76□□□□□ -0.21
CACNA1A-227ENST00000636549 KIF26AQ9ULI4 1882 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-227ENST00000636549 TEX49A0A1B0GTD5 131 aa13.75□□□□□ -0.21
CACNA1A-227ENST00000636549 CFC1BP0CG36 223 aa13.75□□□□□ -0.21
CACNA1A-227ENST00000636549 CFC1P0CG37 223 aa13.75□□□□□ -0.21
CACNA1A-227ENST00000636549 SH2D6Q7Z4S9 175 aa13.75□□□□□ -0.21
CACNA1A-227ENST00000636549 TRAV1-1A0A0B4J248 108 aa13.75□□□□□ -0.21
CACNA1A-227ENST00000636549 HILS1P60008 231 aa13.75□□□□□ -0.21
CACNA1A-227ENST00000636549 ABCA1O95477 2261 aa13.75□□□□□ -0.21
CACNA1A-227ENST00000636549 IGF1P05019 195 aa13.75□□□□□ -0.21
CACNA1A-227ENST00000636549 ADCYAP1P18509 176 aa13.74□□□□□ -0.21
CACNA1A-227ENST00000636549 CFPP27918 469 aa13.74□□□□□ -0.21
CACNA1A-227ENST00000636549 MIR7-3HGQ8N6C7 128 aa13.74□□□□□ -0.21
CACNA1A-227ENST00000636549 CT83Q5H943 113 aa13.74□□□□□ -0.21
CACNA1A-227ENST00000636549 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-227ENST00000636549 PLXNA3P51805 1871 aa13.73□□□□□ -0.21
CACNA1A-227ENST00000636549 C19orf84I3L1E1 186 aa13.73□□□□□ -0.21
CACNA1A-227ENST00000636549 SLPIP03973 132 aa13.73□□□□□ -0.21
CACNA1A-227ENST00000636549 COX8AP10176 69 aa13.73□□□□□ -0.21
CACNA1A-227ENST00000636549 TMEM14CQ9P0S9 112 aa13.73□□□□□ -0.21
CACNA1A-227ENST00000636549 THSD7BQ9C0I4 1608 aa13.72□□□□□ -0.21
CACNA1A-227ENST00000636549 IGKV2-28A0A075B6P5 120 aa13.72□□□□□ -0.21
CACNA1A-227ENST00000636549 IGKV2D-28P01615 120 aa13.72□□□□□ -0.21
CACNA1A-227ENST00000636549 A4D1N5 150 aa13.72□□□□□ -0.21
CACNA1A-227ENST00000636549 CNOT1A5YKK6 2376 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-227ENST00000636549 FNDC10F2Z333 226 aa13.72□□□□□ -0.21
CACNA1A-227ENST00000636549 TRBV10-2A0A0K0K1G8 114 aa13.71□□□□□ -0.21
CACNA1A-227ENST00000636549 FAM222AQ5U5X8 452 aa13.71□□□□□ -0.21
CACNA1A-227ENST00000636549 UNQ9165/PRO28630Q6UXU0 137 aa13.71□□□□□ -0.21
CACNA1A-227ENST00000636549 B5MCH6 92 aa13.71□□□□□ -0.21
CACNA1A-227ENST00000636549 K7EP34 96 aa13.71□□□□□ -0.22
CACNA1A-227ENST00000636549 LINC00173Q6ZV60 143 aa13.71□□□□□ -0.22
CACNA1A-227ENST00000636549 C7orf33Q8WU49 177 aa13.71□□□□□ -0.22
CACNA1A-227ENST00000636549 BRK1Q8WUW1 75 aa13.71□□□□□ -0.22
CACNA1A-227ENST00000636549 LY6G6DO95868 133 aa13.71□□□□□ -0.22
CACNA1A-227ENST00000636549 C20orf78Q9BR46 151 aa13.71□□□□□ -0.22
CACNA1A-227ENST00000636549 IGLV1-44P01699 117 aa13.7□□□□□ -0.22
CACNA1A-227ENST00000636549 FGF23Q9GZV9 251 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-227ENST00000636549 RPL37AP8A6NKH3 93 aa13.7□□□□□ -0.22
CACNA1A-227ENST00000636549 F8W1H4 67 aa13.7□□□□□ -0.22
CACNA1A-227ENST00000636549 PIP4P1Q86T03 277 aa13.7□□□□□ -0.22
CACNA1A-227ENST00000636549 FHL1Q13642 323 aa13.7□□□□□ -0.22
CACNA1A-227ENST00000636549 K7EP13 123 aa13.7□□□□□ -0.22
CACNA1A-227ENST00000636549 MYCNOSP40205 109 aa13.7□□□□□ -0.22
CACNA1A-227ENST00000636549 LGALS9BQ3B8N2 356 aa13.7□□□□□ -0.22
CACNA1A-227ENST00000636549 LGALS9CQ6DKI2 356 aa13.7□□□□□ -0.22
CACNA1A-227ENST00000636549 H3BUA1 57 aa13.69□□□□□ -0.22
CACNA1A-227ENST00000636549 TTTY13Q9BZ97 58 aa13.69□□□□□ -0.22
CACNA1A-227ENST00000636549 IL17DQ8TAD2 202 aa13.69□□□□□ -0.22
CACNA1A-227ENST00000636549 SMR3AQ99954 134 aa13.69□□□□□ -0.22
CACNA1A-227ENST00000636549 PLXNA4Q9HCM2 1894 aa13.69□□□□□ -0.22
CACNA1A-227ENST00000636549 TRAV23DV6A0A075B6W5 121 aa13.69□□□□□ -0.22
CACNA1A-227ENST00000636549 C3orf22Q8N5N4 141 aa13.69□□□□□ -0.22
CACNA1A-227ENST00000636549 IGLV2-8P01709 118 aa13.69□□□□□ -0.22
CACNA1A-227ENST00000636549 FOXL2NBQ6ZUU3 175 aa13.69□□□□□ -0.22
CACNA1A-227ENST00000636549 COX7BP24311 80 aa13.68□□□□□ -0.22
CACNA1A-227ENST00000636549 C11orf52Q96A22 123 aa13.68□□□□□ -0.22
CACNA1A-227ENST00000636549 WISP2O76076 250 aa13.67□□□□□ -0.22
CACNA1A-227ENST00000636549 MAP6D1Q9H9H5 199 aa13.67□□□□□ -0.22
CACNA1A-227ENST00000636549 SPANXA1Q9NS26 97 aa13.67□□□□□ -0.22
CACNA1A-227ENST00000636549 C16orf54Q6UWD8 224 aa13.67□□□□□ -0.22
CACNA1A-227ENST00000636549 GVINP1Q7Z2Y8 2422 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 309.8 ms