RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CACNA1HO95180 2353 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 NPYP01303 97 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 NPSP0C0P6 89 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 NFE4Q86UQ8 179 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 C17orf82Q86X59 251 aaPredicted RBP4.35□□□□□ -1.71
SCN1A-209ENST00000635750 IGKV2-24A0A0C4DH68 120 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 ETDBQ3ZM63 59 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 COX7BP24311 80 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 ZNF664Q8N3J9 261 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 KAAG1Q9UBP8 84 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 TANC1Q9C0D5 1861 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 BTCP35070 178 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 ARHGAP32A7KAX9 2087 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 H3BMG7 143 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 K7EP34 96 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 CRYGDP07320 174 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 LYL1P12980 280 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 FAM231DQ6ZW35 169 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 C3orf22Q8N5N4 141 aa4.35□□□□□ -1.71
SCN1A-209ENST00000635750 NDUFS7O75251 213 aa4.34□□□□□ -1.71
SCN1A-209ENST00000635750 SPTSSBQ8NFR3 76 aa4.34□□□□□ -1.71
SCN1A-209ENST00000635750 ATG2AQ2TAZ0 1938 aa4.34□□□□□ -1.71
SCN1A-209ENST00000635750 MAJINQ3KP22 176 aa4.34□□□□□ -1.71
SCN1A-209ENST00000635750 ZNF706Q9Y5V0 76 aaPredicted RBP4.34□□□□□ -1.71
SCN1A-209ENST00000635750 IGHV4-30-2A0A087WSY4 118 aa4.34□□□□□ -1.71
SCN1A-209ENST00000635750 C12orf74Q32Q52 190 aa4.34□□□□□ -1.71
SCN1A-209ENST00000635750 DUX4L9Q6RFH8 374 aaPredicted RBP4.34□□□□□ -1.71
SCN1A-209ENST00000635750 NDUFA11Q86Y39 141 aa4.34□□□□□ -1.71
SCN1A-209ENST00000635750 CTSGP08311 255 aa4.34□□□□□ -1.71
SCN1A-209ENST00000635750 TMEM263Q8WUH6 116 aaKnown RBP4.34□□□□□ -1.71
SCN1A-209ENST00000635750 CENPVL3A0A0U1RRI6 287 aa4.34□□□□□ -1.72
SCN1A-209ENST00000635750 ZFP36P26651 326 aaKnown RBP4.34□□□□□ -1.72
SCN1A-209ENST00000635750 PYY3Q5JQD4 70 aa4.34□□□□□ -1.72
SCN1A-209ENST00000635750 KLHDC3Q9BQ90 382 aa4.34□□□□□ -1.72
SCN1A-209ENST00000635750 IGKV3D-7A0A0C4DH55 119 aa4.34□□□□□ -1.72
SCN1A-209ENST00000635750 K7EP13 123 aa4.34□□□□□ -1.72
SCN1A-209ENST00000635750 NTN5Q8WTR8 489 aaPredicted RBP4.34□□□□□ -1.72
SCN1A-209ENST00000635750 C2orf70A6NJV1 201 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 COLCA2A8K830 154 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 IGLC1P0CG04 106 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 IGHV4-38-2P0DP08 117 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 FAM110AQ9BQ89 295 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 C20orf144Q9BQM9 153 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 HIGD2AQ9BW72 106 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 PRR14LQ5THK1 2151 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 FXYD5Q96DB9 178 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 IGHV2-70P01814 119 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 PRO0255Q9UI72 69 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 DEFB4AO15263 64 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 ODF1Q14990 250 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 FOXL2NBQ6ZUU3 175 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 CYTL1Q9NRR1 136 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 TPSG1Q9NRR2 321 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 A0A087WV48 116 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 K7ERJ3 54 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 BPY2O14599 106 aa4.33□□□□□ -1.72
SCN1A-209ENST00000635750 IGHV1-58A0A0C4DH39 117 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 IGLV1-44P01699 117 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 ZNF491Q8N8L2 437 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 CYYR1Q96J86 154 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 IGKV1-17P01599 117 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 WT1-ASQ06250 92 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 NUP210LQ5VU65 1888 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 FAM19A1Q7Z5A9 133 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 AJUBAQ96IF1 538 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 IGHV4-61A0A0C4DH41 118 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 A0A0G2JRQ6 117 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 TMEM89A2RUT3 159 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 LY6G6EA0A0G2JKS1 128 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 LOC105371267A0A1B0GV96 52 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 QRFPP83859 136 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 ARTNQ5T4W7 220 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 UFSP1Q6NVU6 142 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 DKK2Q9UBU2 259 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 Q6ZRM9 215 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 PCP2Q8IVA1 136 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 V9GYV3 84 aa4.32□□□□□ -1.72
SCN1A-209ENST00000635750 IGKV1D-37A0A075B6S9 117 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 DEFB131BA0A096LNP1 70 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 A4D1N5 150 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 C16orf54Q6UWD8 224 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 LINC01548A6NM66 108 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 Q8N9W7 124 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 RPL39LQ96EH5 51 aaKnown RBP4.31□□□□□ -1.72
SCN1A-209ENST00000635750 PRYO14603 147 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 CCL25O15444 150 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 C5orf56Q8N8D9 126 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 SS18L2Q9UHA2 77 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 EXPH5Q8NEV8 1989 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 IGLC7A0M8Q6 106 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 IGKV2D-26A0A0A0MRZ7 120 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 SMIM9A6NGZ8 99 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 LGALS9O00182 355 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 PLA2G2CQ5R387 149 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 SHISA2Q6UWI4 295 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 AGPAT4-IT1Q9H0P7 198 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 K7EMT4 169 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 SIPA1L1O43166 1804 aa4.31□□□□□ -1.72
SCN1A-209ENST00000635750 OXLD1Q5BKU9 147 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms