RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 IGHV3-64DA0A0J9YX35 117 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 TCRBV4S1A1TA0A5B7 111 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 FAM168BA1KXE4 195 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 B4DSR2 109 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 UMAD1C9J7I0 102 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 IGHV4-34P06331 123 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 ASAH2BP0C7U1 165 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 CXCL8P10145 99 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 RNASE2P10153 161 aaKnown RBP1.91□□□□□ -2.1
PSPC1-208ENST00000635562 ROMO1P60602 79 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 SNRPFP62306 86 aaKnown RBP1.91□□□□□ -2.1
PSPC1-208ENST00000635562 XAF1Q6GPH4 301 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 LINC00269Q8N2A0 174 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 C14orf178Q8N769 122 aaPredicted RBP1.91□□□□□ -2.1
PSPC1-208ENST00000635562 C1orf64Q8NEQ6 169 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 DEFB126Q9BYW3 111 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 LINC00574Q9H8X3 128 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 NXT2Q9NPJ8 142 aaKnown RBP1.91□□□□□ -2.1
PSPC1-208ENST00000635562 ZNRD1Q9P1U0 126 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 NDUFA12Q9UI09 145 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 DLG5Q8TDM6 1919 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 TUBGCP6Q96RT7 1819 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 LRP5O75197 1615 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 ZNF318Q5VUA4 2279 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 MALRD1Q5VYJ5 2156 aa1.91□□□□□ -2.1
PSPC1-208ENST00000635562 CPAMD8Q8IZJ3 1885 aa1.9□□□□□ -2.1
PSPC1-208ENST00000635562 ANKRD36CQ5JPF3 1778 aa1.9□□□□□ -2.1
PSPC1-208ENST00000635562 CDC42BPGQ6DT37 1551 aa1.9□□□□□ -2.1
PSPC1-208ENST00000635562 GTF3C1Q12789 2109 aa1.9□□□□□ -2.1
PSPC1-208ENST00000635562 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.9□□□□□ -2.11
PSPC1-208ENST00000635562 IGKV1D-37A0A075B6S9 117 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 IGKV1OR2-108A0A075B7D4 117 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 A8MUU9 505 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 C17orf98A8MV24 154 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 F2Z2F3 143 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 EFNA4P52798 201 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 FXYD2P54710 66 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 GNG11P61952 73 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 ZNF117Q03924 483 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 ZNF816Q0VGE8 651 aaPredicted RBP1.9□□□□□ -2.11
PSPC1-208ENST00000635562 ESRGQ1W209 222 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 FAM229BQ4G0N7 80 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 LYPD5Q6UWN5 251 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 TMEM136Q6ZRR5 245 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 RPRMLQ8N4K4 120 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 MIR7-3HGQ8N6C7 128 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 LINC01560Q8TB33 94 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 DYNLRB2Q8TF09 96 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 C16orf74Q96GX8 76 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 TMEM141Q96I45 108 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 SCRT1Q9BWW7 348 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 PRR34Q9NV39 138 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 HIGD1BQ9P298 99 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 TRAPPC1Q9Y5R8 145 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 ICOSQ9Y6W8 199 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 U3KQK5 164 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 TOP2BQ02880 1626 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 WIZO95785 1651 aa1.9□□□□□ -2.11
PSPC1-208ENST00000635562 IQGAP2Q13576 1575 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 POLR1AO95602 1720 aaPredicted RBP1.89□□□□□ -2.11
PSPC1-208ENST00000635562 KDM6BO15054 1643 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 ABCA5Q8WWZ7 1642 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 BIVM-ERCC5R4GMW8 1640 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 TRAV7A0A075B6U4 112 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 TRAV13-2A0A0B4J235 113 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 TRBV10-2A0A0K0K1G8 114 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 CRYM-AS1A6NIL9 109 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 C16orf90A8MZG2 172 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 C11orf94C9JXX5 98 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 H7BZZ5 65 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 BCE1O60756 84 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 LHBP01229 141 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 ACYP1P07311 99 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 DNAH10OSP0CZ25 163 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 SMIM13P0DJ93 91 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 ZNF22P17026 224 aaPredicted RBP1.89□□□□□ -2.11
PSPC1-208ENST00000635562 ZNF79Q15937 498 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 S100A7L2Q5SY68 101 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 C1orf134Q5TEV5 83 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 FAM27BQ5VT28 67 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 SLC48A1Q6P1K1 146 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 Q6ZQT0 140 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 LYZL2Q7Z4W2 148 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 TMEM105Q8N8V8 129 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 CMTM2Q8TAZ6 248 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 SMIM7Q9BQ49 75 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 TMEM14AQ9Y6G1 99 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 V9GYH0 126 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 KIAA0586Q9BVV6 1533 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 LOC285556D6RIA3 1793 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 ANKRD50Q9ULJ7 1429 aa1.89□□□□□ -2.11
PSPC1-208ENST00000635562 A0A087WSZ3 146 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 TRAV3A0A0B4J244 114 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 A0A0B4J2C4 111 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 LOC107984156A0A0G2JMH3 177 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 PANO1I0J062 215 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 KRTAP1-4P0C5Y4 121 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 KRTAP12-2P59991 146 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 KLKP1Q107X0 134 aa1.88□□□□□ -2.11
PSPC1-208ENST00000635562 TMEM170BQ5T4T1 132 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms