RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 NDUFB1O75438 58 aa9.13□□□□□ -0.95
SHPRH-211ENST00000629427 PRB2P02812 416 aaPredicted RBP9.13□□□□□ -0.95
SHPRH-211ENST00000629427 C5orf47Q569G3 176 aa9.13□□□□□ -0.95
SHPRH-211ENST00000629427 C16orf54Q6UWD8 224 aa9.13□□□□□ -0.95
SHPRH-211ENST00000629427 RBM3P98179 157 aaKnown RBP9.13□□□□□ -0.95
SHPRH-211ENST00000629427 TRBV7-3A0A075B6L6 115 aa9.13□□□□□ -0.95
SHPRH-211ENST00000629427 NCR3O14931 201 aa9.13□□□□□ -0.95
SHPRH-211ENST00000629427 C11orf52Q96A22 123 aa9.13□□□□□ -0.95
SHPRH-211ENST00000629427 SMAD5-AS1Q9Y6J3 95 aa9.13□□□□□ -0.95
SHPRH-211ENST00000629427 SND1-IT1Q9HBX3 110 aa9.12□□□□□ -0.95
SHPRH-211ENST00000629427 K7EP13 123 aa9.12□□□□□ -0.95
SHPRH-211ENST00000629427 IGLV3-1P01715 115 aa9.12□□□□□ -0.95
SHPRH-211ENST00000629427 PRR20EP86478 221 aa9.12□□□□□ -0.95
SHPRH-211ENST00000629427 PRR20CP86479 221 aa9.12□□□□□ -0.95
SHPRH-211ENST00000629427 PRR20DP86480 221 aa9.12□□□□□ -0.95
SHPRH-211ENST00000629427 PRR20BP86481 221 aa9.12□□□□□ -0.95
SHPRH-211ENST00000629427 PRR20AP86496 221 aa9.12□□□□□ -0.95
SHPRH-211ENST00000629427 Q8N9W7 124 aa9.12□□□□□ -0.95
SHPRH-211ENST00000629427 K7EP34 96 aa9.12□□□□□ -0.95
SHPRH-211ENST00000629427 ZFP36P26651 326 aaKnown RBP9.12□□□□□ -0.95
SHPRH-211ENST00000629427 C4orf3Q8WVX3 66 aa9.12□□□□□ -0.95
SHPRH-211ENST00000629427 IGHG2P01859 326 aa9.11□□□□□ -0.95
SHPRH-211ENST00000629427 PRSS47A8MTI9 375 aa9.11□□□□□ -0.95
SHPRH-211ENST00000629427 I3L2K1 104 aa9.11□□□□□ -0.95
SHPRH-211ENST00000629427 NDUFS6O75380 124 aaKnown RBP9.11□□□□□ -0.95
SHPRH-211ENST00000629427 Q8N1Y9 231 aa9.11□□□□□ -0.95
SHPRH-211ENST00000629427 IGLV11-55A0A075B6I3 123 aa9.11□□□□□ -0.95
SHPRH-211ENST00000629427 IGFL2Q6UWQ7 119 aa9.11□□□□□ -0.95
SHPRH-211ENST00000629427 ZFP2Q6ZN57 461 aa9.11□□□□□ -0.95
SHPRH-211ENST00000629427 K7EIM0 57 aa9.11□□□□□ -0.95
SHPRH-211ENST00000629427 CFC1BP0CG36 223 aa9.11□□□□□ -0.95
SHPRH-211ENST00000629427 CFC1P0CG37 223 aa9.11□□□□□ -0.95
SHPRH-211ENST00000629427 MAJINQ3KP22 176 aa9.11□□□□□ -0.95
SHPRH-211ENST00000629427 NDUFA1O15239 70 aa9.1□□□□□ -0.95
SHPRH-211ENST00000629427 SIVA1O15304 175 aa9.1□□□□□ -0.95
SHPRH-211ENST00000629427 RNF138Q8WVD3 245 aa9.1□□□□□ -0.95
SHPRH-211ENST00000629427 VSIG2Q96IQ7 327 aa9.1□□□□□ -0.95
SHPRH-211ENST00000629427 KLK12Q9UKR0 248 aa9.1□□□□□ -0.95
SHPRH-211ENST00000629427 NTN5Q8WTR8 489 aaPredicted RBP9.09□□□□□ -0.95
SHPRH-211ENST00000629427 SPANXDQ9BXN6 97 aa9.09□□□□□ -0.95
SHPRH-211ENST00000629427 PCP2Q8IVA1 136 aa9.09□□□□□ -0.95
SHPRH-211ENST00000629427 C14orf132Q9NPU4 83 aa9.09□□□□□ -0.95
SHPRH-211ENST00000629427 OPRPNQ99935 248 aaPredicted RBP9.08□□□□□ -0.96
SHPRH-211ENST00000629427 CTSGP08311 255 aa9.08□□□□□ -0.96
SHPRH-211ENST00000629427 MYCNOSP40205 109 aa9.08□□□□□ -0.96
SHPRH-211ENST00000629427 DAND5Q8N907 189 aa9.08□□□□□ -0.96
SHPRH-211ENST00000629427 TMEM258P61165 79 aa9.08□□□□□ -0.96
SHPRH-211ENST00000629427 ZNF747Q9BV97 191 aa9.08□□□□□ -0.96
SHPRH-211ENST00000629427 IGF2-ASQ6U949 168 aa9.08□□□□□ -0.96
SHPRH-211ENST00000629427 TECTAO75443 2155 aa9.07□□□□□ -0.96
SHPRH-211ENST00000629427 SPG11Q96JI7 2443 aa9.07□□□□□ -0.96
SHPRH-211ENST00000629427 ALPK3Q96L96 1907 aa9.07□□□□□ -0.96
SHPRH-211ENST00000629427 NREPQ16612 68 aa9.07□□□□□ -0.96
SHPRH-211ENST00000629427 EXPH5Q8NEV8 1989 aa9.07□□□□□ -0.96
SHPRH-211ENST00000629427 GAGE12HA6NDE8 117 aa9.07□□□□□ -0.96
SHPRH-211ENST00000629427 WFDC9Q8NEX5 89 aa9.07□□□□□ -0.96
SHPRH-211ENST00000629427 RPL39P62891 51 aaKnown RBP9.07□□□□□ -0.96
SHPRH-211ENST00000629427 PROP1O75360 226 aa9.07□□□□□ -0.96
SHPRH-211ENST00000629427 MUSTN1Q8IVN3 82 aa9.07□□□□□ -0.96
SHPRH-211ENST00000629427 BAALCQ8WXS3 180 aa9.06□□□□□ -0.96
SHPRH-211ENST00000629427 HIGD2BQ4VC39 106 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 FGF23Q9GZV9 251 aaPredicted RBP9.05□□□□□ -0.96
SHPRH-211ENST00000629427 MSRB1Q9NZV6 116 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 RAI1Q7Z5J4 1906 aaPredicted RBP9.05□□□□□ -0.96
SHPRH-211ENST00000629427 DNAJC9-AS1A6NH13 148 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 SPAG11BQ08648 103 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 WFDC11Q8NEX6 87 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 H3BQ85 93 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 DAZAP2Q15038 168 aaPredicted RBP9.05□□□□□ -0.96
SHPRH-211ENST00000629427 GPHB5Q86YW7 130 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 NPSP0C0P6 89 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 DEFB125Q8N687 156 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 PTPN13Q12923 2485 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 ATG2AQ2TAZ0 1938 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 C11orf45Q8TAV5 145 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 A0A0J9YXV3 536 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 H0YGX0 51 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 IL17DQ8TAD2 202 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 CITED1Q99966 193 aa9.05□□□□□ -0.96
SHPRH-211ENST00000629427 H0Y9J4 135 aa9.04□□□□□ -0.96
SHPRH-211ENST00000629427 A0A1B0GX51 115 aa9.04□□□□□ -0.96
SHPRH-211ENST00000629427 IGKV1-17P01599 117 aa9.04□□□□□ -0.96
SHPRH-211ENST00000629427 DEFB1P60022 68 aa9.04□□□□□ -0.96
SHPRH-211ENST00000629427 MP68P56378 58 aa9.04□□□□□ -0.96
SHPRH-211ENST00000629427 LINC01545Q5VT33 79 aa9.04□□□□□ -0.96
SHPRH-211ENST00000629427 TMEM263Q8WUH6 116 aaKnown RBP9.04□□□□□ -0.96
SHPRH-211ENST00000629427 IGKV3D-7A0A0C4DH55 119 aa9.04□□□□□ -0.96
SHPRH-211ENST00000629427 PRAC2D3DTV9 90 aa9.04□□□□□ -0.96
SHPRH-211ENST00000629427 C10orf91Q5T1B1 145 aa9.04□□□□□ -0.96
SHPRH-211ENST00000629427 HIVEP2P31629 2446 aa9.04□□□□□ -0.96
SHPRH-211ENST00000629427 K7EMT4 169 aa9.04□□□□□ -0.96
SHPRH-211ENST00000629427 GTSF1Q8WW33 167 aa9.04□□□□□ -0.96
SHPRH-211ENST00000629427 WI2-2373I1.2A0A1W2PRP0 233 aa9.03□□□□□ -0.96
SHPRH-211ENST00000629427 TRBV12-3P01733 135 aa9.03□□□□□ -0.96
SHPRH-211ENST00000629427 DIRC1Q969H9 104 aa9.03□□□□□ -0.96
SHPRH-211ENST00000629427 RNF183Q96D59 192 aa9.03□□□□□ -0.96
SHPRH-211ENST00000629427 ZFHX2Q9C0A1 2572 aaPredicted RBP9.03□□□□□ -0.96
SHPRH-211ENST00000629427 LRCOL1A6NCL2 159 aa9.03□□□□□ -0.96
SHPRH-211ENST00000629427 TMEM61Q8N0U2 210 aa9.03□□□□□ -0.96
SHPRH-211ENST00000629427 Q8NFD4 153 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 203.4 ms