RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 TRAV12-3A0A0B4J271 114 aa11.53□□□□□ -0.56
PMS1-221ENST00000624204 G3V318 75 aa11.53□□□□□ -0.56
PMS1-221ENST00000624204 PMVKQ15126 192 aa11.53□□□□□ -0.56
PMS1-221ENST00000624204 LINC01620Q4KN68 170 aa11.53□□□□□ -0.56
PMS1-221ENST00000624204 RNASE13Q5GAN3 156 aaKnown RBP11.52□□□□□ -0.57
PMS1-221ENST00000624204 IGFL2Q6UWQ7 119 aa11.52□□□□□ -0.57
PMS1-221ENST00000624204 DEFB124Q8NES8 71 aa11.52□□□□□ -0.57
PMS1-221ENST00000624204 IGHV4-4A0A075B6R2 117 aa11.51□□□□□ -0.57
PMS1-221ENST00000624204 IGHV3OR16-10A0A075B7F0 116 aa11.51□□□□□ -0.57
PMS1-221ENST00000624204 CDX4O14627 284 aaPredicted RBP11.51□□□□□ -0.57
PMS1-221ENST00000624204 TSHBP01222 138 aa11.51□□□□□ -0.57
PMS1-221ENST00000624204 PAPPA-AS1Q5QFB9 102 aa11.51□□□□□ -0.57
PMS1-221ENST00000624204 Q6ZSV7 163 aa11.51□□□□□ -0.57
PMS1-221ENST00000624204 FAM57AQ8TBR7 257 aa11.51□□□□□ -0.57
PMS1-221ENST00000624204 ODF3Q96PU9 254 aa11.51□□□□□ -0.57
PMS1-221ENST00000624204 ATXN8Q156A1 80 aa11.51□□□□□ -0.57
PMS1-221ENST00000624204 ZNF56Q15929 161 aa11.51□□□□□ -0.57
PMS1-221ENST00000624204 MUSTN1Q8IVN3 82 aa11.51□□□□□ -0.57
PMS1-221ENST00000624204 LINC01560Q8TB33 94 aa11.51□□□□□ -0.57
PMS1-221ENST00000624204 DUX3Q96PT4 197 aa11.51□□□□□ -0.57
PMS1-221ENST00000624204 ZNF580Q9UK33 172 aa11.51□□□□□ -0.57
PMS1-221ENST00000624204 RS1O15537 224 aa11.5□□□□□ -0.57
PMS1-221ENST00000624204 CHCHD5Q9BSY4 110 aa11.5□□□□□ -0.57
PMS1-221ENST00000624204 E7EQL1 145 aa11.5□□□□□ -0.57
PMS1-221ENST00000624204 H3BMM0 161 aa11.5□□□□□ -0.57
PMS1-221ENST00000624204 NPBQ8NG41 125 aa11.5□□□□□ -0.57
PMS1-221ENST00000624204 ZNRF2Q8NHG8 242 aa11.5□□□□□ -0.57
PMS1-221ENST00000624204 UBE2WQ96B02 151 aa11.5□□□□□ -0.57
PMS1-221ENST00000624204 OR10J6PQ8NGY7 276 aa11.5□□□□□ -0.57
PMS1-221ENST00000624204 FOXC1Q12948 553 aa11.49□□□□□ -0.57
PMS1-221ENST00000624204 C2orf82Q6UX34 121 aa11.49□□□□□ -0.57
PMS1-221ENST00000624204 CENPVL3A0A0U1RRI6 287 aa11.49□□□□□ -0.57
PMS1-221ENST00000624204 EIF4EBP3O60516 100 aaPredicted RBP11.49□□□□□ -0.57
PMS1-221ENST00000624204 IGF2RP11717 2491 aa11.49□□□□□ -0.57
PMS1-221ENST00000624204 RNF223E7ERA6 249 aa11.48□□□□□ -0.57
PMS1-221ENST00000624204 METTL26Q96S19 204 aa11.48□□□□□ -0.57
PMS1-221ENST00000624204 ZFAND3Q9H8U3 227 aa11.48□□□□□ -0.57
PMS1-221ENST00000624204 MRPL23Q16540 153 aaKnown RBP11.48□□□□□ -0.57
PMS1-221ENST00000624204 OTOGLQ3ZCN5 2332 aa11.48□□□□□ -0.57
PMS1-221ENST00000624204 A0A0G2JNJ9 132 aa11.48□□□□□ -0.57
PMS1-221ENST00000624204 TMEM95Q3KNT9 176 aa11.48□□□□□ -0.57
PMS1-221ENST00000624204 TMEM263Q8WUH6 116 aaKnown RBP11.48□□□□□ -0.57
PMS1-221ENST00000624204 Q9UFV3 132 aa11.48□□□□□ -0.57
PMS1-221ENST00000624204 CUL9Q8IWT3 2517 aa11.47□□□□□ -0.57
PMS1-221ENST00000624204 C9orf47Q6ZRZ4 202 aa11.47□□□□□ -0.57
PMS1-221ENST00000624204 IGHV3-11P01762 117 aa11.47□□□□□ -0.57
PMS1-221ENST00000624204 ZFHX3Q15911 3703 aa11.47□□□□□ -0.57
PMS1-221ENST00000624204 WNK1Q9H4A3 2382 aa11.46□□□□□ -0.57
PMS1-221ENST00000624204 TRAV21A0A0B4J279 112 aa11.46□□□□□ -0.57
PMS1-221ENST00000624204 IGIPA6NJ69 53 aa11.46□□□□□ -0.57
PMS1-221ENST00000624204 BRI3O95415 125 aa11.46□□□□□ -0.57
PMS1-221ENST00000624204 PTPRQQ9UMZ3 2332 aa11.46□□□□□ -0.58
PMS1-221ENST00000624204 CLPSL1A2RUU4 121 aa11.46□□□□□ -0.58
PMS1-221ENST00000624204 DAND5Q8N907 189 aa11.46□□□□□ -0.58
PMS1-221ENST00000624204 SPXQ9BT56 116 aa11.46□□□□□ -0.58
PMS1-221ENST00000624204 SONP18583 2426 aaKnown RBP11.46□□□□□ -0.58
PMS1-221ENST00000624204 IGHV3-73A0A0B4J1V6 119 aa11.45□□□□□ -0.58
PMS1-221ENST00000624204 Q6Q795 121 aa11.45□□□□□ -0.58
PMS1-221ENST00000624204 TMEM219Q86XT9 240 aa11.45□□□□□ -0.58
PMS1-221ENST00000624204 GPHB5Q86YW7 130 aa11.45□□□□□ -0.58
PMS1-221ENST00000624204 IGHV7-81A0A0B4J1V7 117 aa11.45□□□□□ -0.58
PMS1-221ENST00000624204 TRBV10-2A0A0K0K1G8 114 aa11.45□□□□□ -0.58
PMS1-221ENST00000624204 TRIAP1O43715 76 aa11.45□□□□□ -0.58
PMS1-221ENST00000624204 PIP4P1Q86T03 277 aa11.45□□□□□ -0.58
PMS1-221ENST00000624204 CLEC2BQ92478 149 aa11.45□□□□□ -0.58
PMS1-221ENST00000624204 AMELXQ99217 191 aa11.45□□□□□ -0.58
PMS1-221ENST00000624204 LGALS9O00182 355 aa11.44□□□□□ -0.58
PMS1-221ENST00000624204 A8MZ25 164 aa11.44□□□□□ -0.58
PMS1-221ENST00000624204 PPP1R17O96001 155 aa11.44□□□□□ -0.58
PMS1-221ENST00000624204 C20orf173Q96LM9 149 aa11.44□□□□□ -0.58
PMS1-221ENST00000624204 TRAV8-3A0A0A6YYJ7 113 aa11.44□□□□□ -0.58
PMS1-221ENST00000624204 IGHV1-69DA0A0B4J2H0 117 aa11.44□□□□□ -0.58
PMS1-221ENST00000624204 P0DMU3 169 aa11.44□□□□□ -0.58
PMS1-221ENST00000624204 FAM231AP0DMU4 169 aa11.44□□□□□ -0.58
PMS1-221ENST00000624204 FAM231CP0DMU5 169 aa11.44□□□□□ -0.58
PMS1-221ENST00000624204 SDHAF1A6NFY7 115 aa11.43□□□□□ -0.58
PMS1-221ENST00000624204 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.43□□□□□ -0.58
PMS1-221ENST00000624204 A0A0B4J2C4 111 aa11.43□□□□□ -0.58
PMS1-221ENST00000624204 ZFAND2AQ8N6M9 145 aa11.42□□□□□ -0.58
PMS1-221ENST00000624204 PPDPFQ9H3Y8 114 aa11.42□□□□□ -0.58
PMS1-221ENST00000624204 ZNF876PQ49A33 203 aa11.42□□□□□ -0.58
PMS1-221ENST00000624204 ZNF625Q96I27 306 aaPredicted RBP11.42□□□□□ -0.58
PMS1-221ENST00000624204 CCDC140Q96MF4 163 aa11.42□□□□□ -0.58
PMS1-221ENST00000624204 ID1P41134 155 aa11.42□□□□□ -0.58
PMS1-221ENST00000624204 TMEM141Q96I45 108 aa11.42□□□□□ -0.58
PMS1-221ENST00000624204 UBTD1Q9HAC8 227 aa11.42□□□□□ -0.58
PMS1-221ENST00000624204 VCYO14598 125 aa11.41□□□□□ -0.58
PMS1-221ENST00000624204 ATP6V0E1O15342 81 aa11.41□□□□□ -0.58
PMS1-221ENST00000624204 RPL13AP40429 203 aaKnown RBP11.41□□□□□ -0.58
PMS1-221ENST00000624204 TNFRSF18Q9Y5U5 241 aa11.41□□□□□ -0.58
PMS1-221ENST00000624204 M0QXV9 152 aa11.41□□□□□ -0.58
PMS1-221ENST00000624204 PRR30Q53SZ7 412 aaPredicted RBP11.41□□□□□ -0.58
PMS1-221ENST00000624204 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.41□□□□□ -0.58
PMS1-221ENST00000624204 SUMO4Q6EEV6 95 aa11.41□□□□□ -0.58
PMS1-221ENST00000624204 CEMP1Q6PRD7 247 aaPredicted RBP11.41□□□□□ -0.58
PMS1-221ENST00000624204 VMO1Q7Z5L0 202 aa11.41□□□□□ -0.58
PMS1-221ENST00000624204 M0R2P5 195 aa11.4□□□□□ -0.58
PMS1-221ENST00000624204 RNASE3P12724 160 aaKnown RBP11.4□□□□□ -0.58
PMS1-221ENST00000624204 GRNP28799 593 aaKnown RBP11.4□□□□□ -0.58
PMS1-221ENST00000624204 EEF1AKMT3Q96AZ1 226 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms