RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 KLK9Q9UKQ9 250 aa9.06□□□□□ -0.96
ATRX-214ENST00000624166 RPL39P62891 51 aaKnown RBP9.06□□□□□ -0.96
ATRX-214ENST00000624166 SLC25A29Q8N8R3 303 aa9.06□□□□□ -0.96
ATRX-214ENST00000624166 A0A096LNJ9 63 aa9.06□□□□□ -0.96
ATRX-214ENST00000624166 IGHV1-69P01742 117 aa9.06□□□□□ -0.96
ATRX-214ENST00000624166 TRBV7-3A0A075B6L6 115 aa9.05□□□□□ -0.96
ATRX-214ENST00000624166 TRGV2A0A075B6R0 118 aa9.05□□□□□ -0.96
ATRX-214ENST00000624166 A0A0B4J2C4 111 aa9.05□□□□□ -0.96
ATRX-214ENST00000624166 PHLDA1Q8WV24 401 aaPredicted RBP9.05□□□□□ -0.96
ATRX-214ENST00000624166 TMEM126AQ9H061 195 aa9.05□□□□□ -0.96
ATRX-214ENST00000624166 TRAV13-1A0A0B4J241 112 aa9.05□□□□□ -0.96
ATRX-214ENST00000624166 IGF2-ASQ6U949 168 aa9.05□□□□□ -0.96
ATRX-214ENST00000624166 STHQ8IWL8 128 aa9.05□□□□□ -0.96
ATRX-214ENST00000624166 ZNF625Q96I27 306 aaPredicted RBP9.05□□□□□ -0.96
ATRX-214ENST00000624166 A0A0J9YY99 117 aa9.05□□□□□ -0.96
ATRX-214ENST00000624166 ZMAT4Q9H898 229 aa9.05□□□□□ -0.96
ATRX-214ENST00000624166 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.04□□□□□ -0.964e-6■□□□□ 10.6
ATRX-214ENST00000624166 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
ATRX-214ENST00000624166 PAX4O43316 350 aa9.04□□□□□ -0.96
ATRX-214ENST00000624166 GHRHP01286 108 aa9.04□□□□□ -0.96
ATRX-214ENST00000624166 DNAJC30Q96LL9 226 aa9.04□□□□□ -0.96
ATRX-214ENST00000624166 HERVK_113P63121 156 aa9.04□□□□□ -0.96
ATRX-214ENST00000624166 PRR30Q53SZ7 412 aaPredicted RBP9.04□□□□□ -0.96
ATRX-214ENST00000624166 NDUFV3P56181 108 aaKnown RBP9.04□□□□□ -0.96
ATRX-214ENST00000624166 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
ATRX-214ENST00000624166 NRACQ8N912 160 aa9.04□□□□□ -0.96
ATRX-214ENST00000624166 KNCNA6PVL3 124 aa9.03□□□□□ -0.96
ATRX-214ENST00000624166 INSP01308 110 aa9.03□□□□□ -0.96
ATRX-214ENST00000624166 RUSC1-AS1Q66K80 236 aa9.03□□□□□ -0.96
ATRX-214ENST00000624166 Q8N1Y9 231 aa9.03□□□□□ -0.96
ATRX-214ENST00000624166 OTOGLQ3ZCN5 2332 aa9.03□□□□□ -0.96
ATRX-214ENST00000624166 HIST1H4AP62805 103 aaKnown RBP9.03□□□□□ -0.96
ATRX-214ENST00000624166 MRPL23Q16540 153 aaKnown RBP9.03□□□□□ -0.96
ATRX-214ENST00000624166 Q71RC1 249 aaPredicted RBP9.03□□□□□ -0.96
ATRX-214ENST00000624166 TRAV13-2A0A0B4J235 113 aa9.02□□□□□ -0.96
ATRX-214ENST00000624166 LY6LH3BQJ8 138 aa9.02□□□□□ -0.96
ATRX-214ENST00000624166 MSRB2Q9Y3D2 182 aa9.02□□□□□ -0.96
ATRX-214ENST00000624166 SMAD5-AS1Q9Y6J3 95 aa9.02□□□□□ -0.96
ATRX-214ENST00000624166 SOCS3O14543 225 aa9.02□□□□□ -0.97
ATRX-214ENST00000624166 COX8CQ7Z4L0 72 aa9.02□□□□□ -0.97
ATRX-214ENST00000624166 SYNJ2BPP57105 145 aa9.02□□□□□ -0.97
ATRX-214ENST00000624166 DEFB131AP59861 70 aa9.02□□□□□ -0.97
ATRX-214ENST00000624166 CFAP161Q6P656 301 aa9.02□□□□□ -0.97
ATRX-214ENST00000624166 TRGV1A0A0A0MS02 117 aa9.02□□□□□ -0.97
ATRX-214ENST00000624166 MRPS12O15235 138 aaKnown RBP9.02□□□□□ -0.97
ATRX-214ENST00000624166 ANKHD1Q8IWZ3 2542 aaKnown RBP9.01□□□□□ -0.97
ATRX-214ENST00000624166 IGHV4-4A0A075B6R2 117 aa9.01□□□□□ -0.97
ATRX-214ENST00000624166 ODF3BA8MYP8 253 aa9.01□□□□□ -0.97
ATRX-214ENST00000624166 TNRC6BQ9UPQ9 1833 aaKnown RBP9.01□□□□□ -0.97
ATRX-214ENST00000624166 P0DMU3 169 aa9.01□□□□□ -0.97
ATRX-214ENST00000624166 FAM231AP0DMU4 169 aa9.01□□□□□ -0.97
ATRX-214ENST00000624166 FAM231CP0DMU5 169 aa9.01□□□□□ -0.97
ATRX-214ENST00000624166 INSL3P51460 131 aa9.01□□□□□ -0.97
ATRX-214ENST00000624166 C22orf34Q6ZV56 151 aa9.01□□□□□ -0.97
ATRX-214ENST00000624166 C20orf203Q8NBC4 194 aa9.01□□□□□ -0.97
ATRX-214ENST00000624166 CHCHD5Q9BSY4 110 aa9.01□□□□□ -0.97
ATRX-214ENST00000624166 DOPEY2Q9Y3R5 2298 aa9.01□□□□□ -0.97
ATRX-214ENST00000624166 TRGV4A0A0C4DH28 118 aa9□□□□□ -0.97
ATRX-214ENST00000624166 B4DSR2 109 aa9□□□□□ -0.97
ATRX-214ENST00000624166 BAALC-AS2P0C853 105 aa9□□□□□ -0.97
ATRX-214ENST00000624166 TANC2Q9HCD6 1990 aa9□□□□□ -0.97
ATRX-214ENST00000624166 TRACP01848 142 aa9□□□□□ -0.97
ATRX-214ENST00000624166 DSCAML1Q8TD84 2053 aa9□□□□□ -0.97
ATRX-214ENST00000624166 XGP55808 180 aa9□□□□□ -0.97
ATRX-214ENST00000624166 ZFAND3Q9H8U3 227 aa9□□□□□ -0.97
ATRX-214ENST00000624166 NOTCH3Q9UM47 2321 aa8.99□□□□□ -0.97
ATRX-214ENST00000624166 GAS8-AS1O95177 125 aa8.99□□□□□ -0.97
ATRX-214ENST00000624166 C5orf56Q8N8D9 126 aa8.99□□□□□ -0.97
ATRX-214ENST00000624166 FAM236AA0A1B0GUQ0 79 aa8.99□□□□□ -0.97
ATRX-214ENST00000624166 FAM236BA0A1B0GV22 79 aa8.99□□□□□ -0.97
ATRX-214ENST00000624166 RPL32P62910 135 aaKnown RBP8.99□□□□□ -0.97
ATRX-214ENST00000624166 RNASE13Q5GAN3 156 aaKnown RBP8.99□□□□□ -0.97
ATRX-214ENST00000624166 CCDC140Q96MF4 163 aa8.99□□□□□ -0.97
ATRX-214ENST00000624166 CLUHP3Q96NS8 147 aa8.99□□□□□ -0.97
ATRX-214ENST00000624166 MDFICQ9P1T7 246 aa8.99□□□□□ -0.97
ATRX-214ENST00000624166 IGHV3-33P01772 117 aa8.99□□□□□ -0.97
ATRX-214ENST00000624166 Q9H8V8 135 aa8.99□□□□□ -0.97
ATRX-214ENST00000624166 IGHV1-58A0A0C4DH39 117 aa8.98□□□□□ -0.97
ATRX-214ENST00000624166 IGHV3-30-3P0DP02 117 aa8.98□□□□□ -0.97
ATRX-214ENST00000624166 EBI3Q14213 229 aa8.98□□□□□ -0.97
ATRX-214ENST00000624166 HERV-K104P63124 156 aa8.98□□□□□ -0.97
ATRX-214ENST00000624166 C6orf226Q5I0X4 101 aa8.98□□□□□ -0.97
ATRX-214ENST00000624166 TRIOO75962 3097 aa8.98□□□□□ -0.97
ATRX-214ENST00000624166 K7ENP7 123 aa8.98□□□□□ -0.97
ATRX-214ENST00000624166 LGALS9O00182 355 aa8.98□□□□□ -0.97
ATRX-214ENST00000624166 CMC4P56277 68 aaPredicted RBP8.98□□□□□ -0.97
ATRX-214ENST00000624166 TRANK1O15050 2925 aa8.98□□□□□ -0.97
ATRX-214ENST00000624166 K7EMT4 169 aa8.97□□□□□ -0.97
ATRX-214ENST00000624166 IGHV3-30P01768 117 aa8.97□□□□□ -0.97
ATRX-214ENST00000624166 IGHV3-30-5P0DP03 117 aa8.97□□□□□ -0.97
ATRX-214ENST00000624166 DSCR9P59020 149 aa8.97□□□□□ -0.97
ATRX-214ENST00000624166 A0A0J9YXY3 114 aa8.97□□□□□ -0.97
ATRX-214ENST00000624166 ATP5G1P05496 136 aa8.97□□□□□ -0.97
ATRX-214ENST00000624166 TET2Q6N021 2002 aaPredicted RBP8.97□□□□□ -0.97
ATRX-214ENST00000624166 IGHV3-38A0A0C4DH36 116 aa8.97□□□□□ -0.97
ATRX-214ENST00000624166 ZNRF2Q8NHG8 242 aa8.97□□□□□ -0.97
ATRX-214ENST00000624166 TRBV30A0A0K0K1B3 111 aa8.97□□□□□ -0.97
ATRX-214ENST00000624166 ATOX1O00244 68 aa8.97□□□□□ -0.97
ATRX-214ENST00000624166 UBE2D1P51668 147 aa8.97□□□□□ -0.97
ATRX-214ENST00000624166 C11orf21Q9P2W6 132 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms