RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 TOMM6Q96B49 74 aa9.53□□□□□ -0.88
CDH1-212ENST00000611625 LY6LH3BQJ8 138 aa9.53□□□□□ -0.88
CDH1-212ENST00000611625 FSTL3O95633 263 aa9.53□□□□□ -0.88
CDH1-212ENST00000611625 IGLV2-11P01706 119 aa9.53□□□□□ -0.88
CDH1-212ENST00000611625 BAALCQ8WXS3 180 aa9.53□□□□□ -0.88
CDH1-212ENST00000611625 NACAE9PAV3 2078 aa9.53□□□□□ -0.88
CDH1-212ENST00000611625 CFC1BP0CG36 223 aa9.53□□□□□ -0.88
CDH1-212ENST00000611625 CFC1P0CG37 223 aa9.53□□□□□ -0.88
CDH1-212ENST00000611625 MED14OSP0DP75 135 aa9.53□□□□□ -0.88
CDH1-212ENST00000611625 PTPN13Q12923 2485 aa9.53□□□□□ -0.88
CDH1-212ENST00000611625 VPREB3Q9UKI3 123 aa9.53□□□□□ -0.88
CDH1-212ENST00000611625 RPL39P62891 51 aaKnown RBP9.52□□□□□ -0.89
CDH1-212ENST00000611625 E9PLD3 99 aa9.52□□□□□ -0.89
CDH1-212ENST00000611625 DEFB130BP0DP73 79 aa9.52□□□□□ -0.89
CDH1-212ENST00000611625 DEFB130AP0DP74 79 aa9.52□□□□□ -0.89
CDH1-212ENST00000611625 CFHR3Q02985 330 aa9.52□□□□□ -0.89
CDH1-212ENST00000611625 WFDC2Q14508 124 aa9.52□□□□□ -0.89
CDH1-212ENST00000611625 C10orf105Q8TEF2 133 aa9.52□□□□□ -0.89
CDH1-212ENST00000611625 A0A0J9YXV3 536 aa9.51□□□□□ -0.89
CDH1-212ENST00000611625 VWC2LB2RUY7 222 aa9.51□□□□□ -0.89
CDH1-212ENST00000611625 LINC01548A6NM66 108 aa9.51□□□□□ -0.89
CDH1-212ENST00000611625 TRBV12-3P01733 135 aa9.51□□□□□ -0.89
CDH1-212ENST00000611625 IGHG2P01859 326 aa9.51□□□□□ -0.89
CDH1-212ENST00000611625 OVOL2Q9BRP0 275 aa9.51□□□□□ -0.89
CDH1-212ENST00000611625 C2CD3Q4AC94 2353 aa9.51□□□□□ -0.89
CDH1-212ENST00000611625 S100A7L2Q5SY68 101 aa9.51□□□□□ -0.89
CDH1-212ENST00000611625 NOTCH2Q04721 2471 aa9.51□□□□□ -0.89
CDH1-212ENST00000611625 TMEM243Q9BU79 118 aa9.5□□□□□ -0.89
CDH1-212ENST00000611625 K7EMT4 169 aa9.5□□□□□ -0.89
CDH1-212ENST00000611625 C11orf86A6NJI1 115 aa9.5□□□□□ -0.89
CDH1-212ENST00000611625 DEFB136Q30KP8 78 aa9.5□□□□□ -0.89
CDH1-212ENST00000611625 NTN5Q8WTR8 489 aaPredicted RBP9.5□□□□□ -0.89
CDH1-212ENST00000611625 DSCAMO60469 2012 aa9.5□□□□□ -0.89
CDH1-212ENST00000611625 GAGE7O76087 117 aa9.5□□□□□ -0.89
CDH1-212ENST00000611625 GAGE12FP0CL80 117 aa9.5□□□□□ -0.89
CDH1-212ENST00000611625 GAGE12GP0CL81 117 aa9.5□□□□□ -0.89
CDH1-212ENST00000611625 GAGE12IP0CL82 117 aa9.5□□□□□ -0.89
CDH1-212ENST00000611625 Q8N1Y9 231 aa9.5□□□□□ -0.89
CDH1-212ENST00000611625 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.49□□□□□ -0.89
CDH1-212ENST00000611625 IGKV2-29A2NJV5 120 aaPredicted RBP9.49□□□□□ -0.89
CDH1-212ENST00000611625 LMO4P61968 165 aa9.49□□□□□ -0.89
CDH1-212ENST00000611625 HERVK_113P63121 156 aa9.49□□□□□ -0.89
CDH1-212ENST00000611625 Q96MF0 132 aa9.49□□□□□ -0.89
CDH1-212ENST00000611625 TIMM17AQ99595 171 aa9.49□□□□□ -0.89
CDH1-212ENST00000611625 DSCAML1Q8TD84 2053 aa9.49□□□□□ -0.89
CDH1-212ENST00000611625 ARHGAP32A7KAX9 2087 aa9.49□□□□□ -0.89
CDH1-212ENST00000611625 NCOR2Q9Y618 2525 aa9.49□□□□□ -0.89
CDH1-212ENST00000611625 A4D1N5 150 aa9.49□□□□□ -0.89
CDH1-212ENST00000611625 EBI3Q14213 229 aa9.49□□□□□ -0.89
CDH1-212ENST00000611625 JPT2Q9H910 190 aa9.48□□□□□ -0.89
CDH1-212ENST00000611625 SPANXA1Q9NS26 97 aa9.48□□□□□ -0.89
CDH1-212ENST00000611625 GHRHP01286 108 aa9.48□□□□□ -0.89
CDH1-212ENST00000611625 SS18Q15532 418 aa9.48□□□□□ -0.89
CDH1-212ENST00000611625 GAGE2AQ6NT46 116 aa9.48□□□□□ -0.89
CDH1-212ENST00000611625 CARD19Q96LW7 228 aa9.48□□□□□ -0.89
CDH1-212ENST00000611625 U3KQE9 123 aa9.48□□□□□ -0.89
CDH1-212ENST00000611625 ZFAND3Q9H8U3 227 aa9.48□□□□□ -0.89
CDH1-212ENST00000611625 GPHB5Q86YW7 130 aa9.48□□□□□ -0.89
CDH1-212ENST00000611625 Q8N976 141 aa9.48□□□□□ -0.89
CDH1-212ENST00000611625 U3KQK5 164 aa9.48□□□□□ -0.89
CDH1-212ENST00000611625 SMAD5-AS1Q9Y6J3 95 aa9.47□□□□□ -0.89
CDH1-212ENST00000611625 SLURP1P55000 103 aa9.47□□□□□ -0.89
CDH1-212ENST00000611625 GAGE6Q13070 117 aa9.47□□□□□ -0.89
CDH1-212ENST00000611625 INAFM2P0DMQ5 153 aa9.47□□□□□ -0.89
CDH1-212ENST00000611625 PFN2P35080 140 aa9.47□□□□□ -0.89
CDH1-212ENST00000611625 MUSTN1Q8IVN3 82 aa9.46□□□□□ -0.9
CDH1-212ENST00000611625 RNF185Q96GF1 192 aa9.46□□□□□ -0.9
CDH1-212ENST00000611625 SORL1Q92673 2214 aa9.46□□□□□ -0.9
CDH1-212ENST00000611625 MYO9AB2RTY4 2548 aa9.45□□□□□ -0.9
CDH1-212ENST00000611625 IGHV4OR15-8A0A075B7B6 117 aa9.45□□□□□ -0.9
CDH1-212ENST00000611625 A0A087WW49 117 aa9.45□□□□□ -0.9
CDH1-212ENST00000611625 PRSS47A8MTI9 375 aa9.45□□□□□ -0.9
CDH1-212ENST00000611625 G3V4G9 280 aa9.45□□□□□ -0.9
CDH1-212ENST00000611625 Q9H8V8 135 aa9.45□□□□□ -0.9
CDH1-212ENST00000611625 A6NDX4 124 aa9.45□□□□□ -0.9
CDH1-212ENST00000611625 IGKV2D-26A0A0A0MRZ7 120 aa9.45□□□□□ -0.9
CDH1-212ENST00000611625 TEN1Q86WV5 123 aa9.45□□□□□ -0.9
CDH1-212ENST00000611625 APRG1Q8IVJ8 170 aa9.45□□□□□ -0.9
CDH1-212ENST00000611625 MDFICQ9P1T7 246 aa9.44□□□□□ -0.9
CDH1-212ENST00000611625 CEP295Q9C0D2 2601 aa9.44□□□□□ -0.9
CDH1-212ENST00000611625 A0A0J9YX75 114 aa9.44□□□□□ -0.9
CDH1-212ENST00000611625 IGF1P05019 195 aa9.44□□□□□ -0.9
CDH1-212ENST00000611625 TNFRSF13BO14836 293 aaPredicted RBP9.44□□□□□ -0.9
CDH1-212ENST00000611625 URB1-AS1Q96HZ7 61 aa9.44□□□□□ -0.9
CDH1-212ENST00000611625 SPAG8Q99932 426 aaPredicted RBP9.43□□□□□ -0.9
CDH1-212ENST00000611625 HIST1H4AP62805 103 aaKnown RBP9.43□□□□□ -0.9
CDH1-212ENST00000611625 C2orf91Q6ZV80 131 aa9.43□□□□□ -0.9
CDH1-212ENST00000611625 ANKRD29Q8N6D5 301 aa9.43□□□□□ -0.9
CDH1-212ENST00000611625 PIEZO1Q92508 2521 aa9.43□□□□□ -0.9
CDH1-212ENST00000611625 RNF152Q8N8N0 203 aa9.43□□□□□ -0.9
CDH1-212ENST00000611625 DNAJC30Q96LL9 226 aa9.43□□□□□ -0.9
CDH1-212ENST00000611625 IFITM1P13164 125 aa9.43□□□□□ -0.9
CDH1-212ENST00000611625 C20orf203Q8NBC4 194 aa9.43□□□□□ -0.9
CDH1-212ENST00000611625 TM2D2Q9BX73 214 aa9.43□□□□□ -0.9
CDH1-212ENST00000611625 NAV2Q8IVL1 2488 aa9.42□□□□□ -0.9
CDH1-212ENST00000611625 C20orf173Q96LM9 149 aa9.42□□□□□ -0.9
CDH1-212ENST00000611625 Q8N6K4 173 aa9.42□□□□□ -0.9
CDH1-212ENST00000611625 NRGNQ92686 78 aa9.42□□□□□ -0.9
CDH1-212ENST00000611625 NOP10Q9NPE3 64 aaKnown RBP9.42□□□□□ -0.9
CDH1-212ENST00000611625 LAMTOR3Q9UHA4 124 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms