RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 INSP01308 110 aa11.22□□□□□ -0.61
VPS36-207ENST00000611132 IGHV3-53P01767 116 aa11.22□□□□□ -0.61
VPS36-207ENST00000611132 ICOSQ9Y6W8 199 aa11.21□□□□□ -0.61
VPS36-207ENST00000611132 IGHV3-38A0A0C4DH36 116 aa11.21□□□□□ -0.61
VPS36-207ENST00000611132 S100A7L2Q5SY68 101 aa11.21□□□□□ -0.61
VPS36-207ENST00000611132 TRBV10-2A0A0K0K1G8 114 aa11.21□□□□□ -0.62
VPS36-207ENST00000611132 IGHV3-16A0A0C4DH30 117 aa11.21□□□□□ -0.62
VPS36-207ENST00000611132 DSCAMO60469 2012 aa11.2□□□□□ -0.62
VPS36-207ENST00000611132 ACYP1P07311 99 aa11.2□□□□□ -0.62
VPS36-207ENST00000611132 H3BUA1 57 aa11.2□□□□□ -0.62
VPS36-207ENST00000611132 GRNP28799 593 aaKnown RBP11.2□□□□□ -0.62
VPS36-207ENST00000611132 NACAE9PAV3 2078 aa11.2□□□□□ -0.62
VPS36-207ENST00000611132 B4DSR2 109 aa11.2□□□□□ -0.62
VPS36-207ENST00000611132 DEFB1P60022 68 aa11.2□□□□□ -0.62
VPS36-207ENST00000611132 HHLA3Q9XRX5 114 aa11.19□□□□□ -0.62
VPS36-207ENST00000611132 BDP1A6H8Y1 2624 aa11.19□□□□□ -0.62
VPS36-207ENST00000611132 H3BT86 120 aa11.18□□□□□ -0.62
VPS36-207ENST00000611132 GAS8-AS1O95177 125 aa11.18□□□□□ -0.62
VPS36-207ENST00000611132 COX6B1P14854 86 aa11.18□□□□□ -0.62
VPS36-207ENST00000611132 HERVK_113P63121 156 aa11.18□□□□□ -0.62
VPS36-207ENST00000611132 A0A096LNJ9 63 aa11.18□□□□□ -0.62
VPS36-207ENST00000611132 A0A0J9YY99 117 aa11.18□□□□□ -0.62
VPS36-207ENST00000611132 C6orf226Q5I0X4 101 aa11.18□□□□□ -0.62
VPS36-207ENST00000611132 SLC25A29Q8N8R3 303 aa11.18□□□□□ -0.62
VPS36-207ENST00000611132 UBE2E2Q96LR5 201 aa11.18□□□□□ -0.62
VPS36-207ENST00000611132 TET2Q6N021 2002 aaPredicted RBP11.17□□□□□ -0.62
VPS36-207ENST00000611132 INSL3P51460 131 aa11.17□□□□□ -0.62
VPS36-207ENST00000611132 DNAJC30Q96LL9 226 aa11.17□□□□□ -0.62
VPS36-207ENST00000611132 SMAD5-AS1Q9Y6J3 95 aa11.17□□□□□ -0.62
VPS36-207ENST00000611132 SOCS3O14543 225 aa11.17□□□□□ -0.62
VPS36-207ENST00000611132 ZNRF2Q8NHG8 242 aa11.17□□□□□ -0.62
VPS36-207ENST00000611132 CFAP126Q5VTH2 177 aa11.17□□□□□ -0.62
VPS36-207ENST00000611132 Q8N1Y9 231 aa11.17□□□□□ -0.62
VPS36-207ENST00000611132 C11orf68Q9H3H3 251 aaKnown RBP11.16□□□□□ -0.62
VPS36-207ENST00000611132 Q9H8V8 135 aa11.16□□□□□ -0.62
VPS36-207ENST00000611132 A0A1W2PRX2 142 aa11.16□□□□□ -0.62
VPS36-207ENST00000611132 K7ENP7 123 aa11.16□□□□□ -0.62
VPS36-207ENST00000611132 BAALC-AS2P0C853 105 aa11.16□□□□□ -0.62
VPS36-207ENST00000611132 NRACQ8N912 160 aa11.16□□□□□ -0.62
VPS36-207ENST00000611132 FSTL3O95633 263 aa11.16□□□□□ -0.62
VPS36-207ENST00000611132 JPT2Q9H910 190 aa11.16□□□□□ -0.62
VPS36-207ENST00000611132 TRBV7-3A0A075B6L6 115 aa11.16□□□□□ -0.62
VPS36-207ENST00000611132 C2CD3Q4AC94 2353 aa11.15□□□□□ -0.62
VPS36-207ENST00000611132 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.15□□□□□ -0.62
VPS36-207ENST00000611132 IGKV2-29A2NJV5 120 aaPredicted RBP11.15□□□□□ -0.62
VPS36-207ENST00000611132 NDUFV3P56181 108 aaKnown RBP11.15□□□□□ -0.62
VPS36-207ENST00000611132 CCDC140Q96MF4 163 aa11.15□□□□□ -0.62
VPS36-207ENST00000611132 CNFNQ9BYD5 112 aa11.15□□□□□ -0.62
VPS36-207ENST00000611132 TRAV13-2A0A0B4J235 113 aa11.15□□□□□ -0.62
VPS36-207ENST00000611132 LINC01619G3V211 115 aa11.15□□□□□ -0.62
VPS36-207ENST00000611132 MALP21145 153 aa11.15□□□□□ -0.62
VPS36-207ENST00000611132 C5orf56Q8N8D9 126 aa11.15□□□□□ -0.63
VPS36-207ENST00000611132 C20orf203Q8NBC4 194 aa11.15□□□□□ -0.63
VPS36-207ENST00000611132 OPRPNQ99935 248 aaPredicted RBP11.15□□□□□ -0.63
VPS36-207ENST00000611132 A0A0B4J2C4 111 aa11.14□□□□□ -0.63
VPS36-207ENST00000611132 FAM236AA0A1B0GUQ0 79 aa11.14□□□□□ -0.63
VPS36-207ENST00000611132 FAM236BA0A1B0GV22 79 aa11.14□□□□□ -0.63
VPS36-207ENST00000611132 LY6LH3BQJ8 138 aa11.14□□□□□ -0.63
VPS36-207ENST00000611132 Q71RC1 249 aaPredicted RBP11.14□□□□□ -0.63
VPS36-207ENST00000611132 CSPG4Q6UVK1 2322 aa11.14□□□□□ -0.63
VPS36-207ENST00000611132 GHRHP01286 108 aa11.14□□□□□ -0.63
VPS36-207ENST00000611132 MSMBP08118 114 aa11.14□□□□□ -0.63
VPS36-207ENST00000611132 IGF2-ASQ6U949 168 aa11.14□□□□□ -0.63
VPS36-207ENST00000611132 AJUBAQ96IF1 538 aa11.14□□□□□ -0.63
VPS36-207ENST00000611132 XCL2Q9UBD3 114 aa11.14□□□□□ -0.63
VPS36-207ENST00000611132 ODF3BA8MYP8 253 aa11.13□□□□□ -0.63
VPS36-207ENST00000611132 LY6DQ14210 128 aa11.13□□□□□ -0.63
VPS36-207ENST00000611132 UNQ9165/PRO28630Q6UXU0 137 aa11.13□□□□□ -0.63
VPS36-207ENST00000611132 CLEC2BQ92478 149 aa11.13□□□□□ -0.63
VPS36-207ENST00000611132 WNK1Q9H4A3 2382 aa11.13□□□□□ -0.63
VPS36-207ENST00000611132 IGHV3-30-3P0DP02 117 aa11.13□□□□□ -0.63
VPS36-207ENST00000611132 ZFAND3Q9H8U3 227 aa11.12□□□□□ -0.63
VPS36-207ENST00000611132 TNRC6BQ9UPQ9 1833 aaKnown RBP11.12□□□□□ -0.63
VPS36-207ENST00000611132 TRACP01848 142 aa11.12□□□□□ -0.63
VPS36-207ENST00000611132 CLUHP3Q96NS8 147 aa11.12□□□□□ -0.63
VPS36-207ENST00000611132 C11orf21Q9P2W6 132 aa11.12□□□□□ -0.63
VPS36-207ENST00000611132 ZFP36P26651 326 aaKnown RBP11.12□□□□□ -0.63
VPS36-207ENST00000611132 IGF1P05019 195 aa11.12□□□□□ -0.63
VPS36-207ENST00000611132 PFN2P35080 140 aa11.12□□□□□ -0.63
VPS36-207ENST00000611132 XGP55808 180 aa11.12□□□□□ -0.63
VPS36-207ENST00000611132 MRPS12O15235 138 aaKnown RBP11.11□□□□□ -0.63
VPS36-207ENST00000611132 TMEM126AQ9H061 195 aa11.11□□□□□ -0.63
VPS36-207ENST00000611132 ZMAT4Q9H898 229 aa11.11□□□□□ -0.63
VPS36-207ENST00000611132 LGALS9O00182 355 aa11.11□□□□□ -0.63
VPS36-207ENST00000611132 C11orf44Q8N8P7 122 aa11.11□□□□□ -0.63
VPS36-207ENST00000611132 LAMTOR3Q9UHA4 124 aa11.11□□□□□ -0.63
VPS36-207ENST00000611132 PTPRQQ9UMZ3 2332 aa11.11□□□□□ -0.63
VPS36-207ENST00000611132 TEX49A0A1B0GTD5 131 aa11.11□□□□□ -0.63
VPS36-207ENST00000611132 ARHGAP32A7KAX9 2087 aa11.11□□□□□ -0.63
VPS36-207ENST00000611132 DSCR9P59020 149 aa11.11□□□□□ -0.63
VPS36-207ENST00000611132 DAND5Q8N907 189 aa11.11□□□□□ -0.63
VPS36-207ENST00000611132 IGHV1-58A0A0C4DH39 117 aa11.1□□□□□ -0.63
VPS36-207ENST00000611132 CITED1Q99966 193 aa11.1□□□□□ -0.63
VPS36-207ENST00000611132 OTOGLQ3ZCN5 2332 aa11.1□□□□□ -0.63
VPS36-207ENST00000611132 A0A0J9YXY3 114 aa11.1□□□□□ -0.63
VPS36-207ENST00000611132 TMEM243Q9BU79 118 aa11.1□□□□□ -0.63
VPS36-207ENST00000611132 SORL1Q92673 2214 aa11.1□□□□□ -0.63
VPS36-207ENST00000611132 IGHV3-33P01772 117 aa11.1□□□□□ -0.63
VPS36-207ENST00000611132 SIRPDQ9H106 197 aa11.09□□□□□ -0.63
VPS36-207ENST00000611132 SPANXCQ9NY87 97 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms