RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 TMEM258P61165 79 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 LOXL1Q08397 574 aaPredicted RBP3.93□□□□□ -1.78
SSX9-202ENST00000608568 MRPL51Q4U2R6 128 aaKnown RBP3.93□□□□□ -1.78
SSX9-202ENST00000608568 C9orf153Q5TBE3 101 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 PVRIGQ6DKI7 326 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 LINC00322Q6ZN03 302 aaPredicted RBP3.93□□□□□ -1.78
SSX9-202ENST00000608568 LINC00305Q7Z4B0 112 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 FAM19A5Q7Z5A7 132 aaPredicted RBP3.93□□□□□ -1.78
SSX9-202ENST00000608568 MDP1Q86V88 176 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 NDUFA11Q86Y39 141 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 ARL17AQ8IVW1 177 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 C11orf53Q8IXP5 236 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 SPATA3Q8NHX4 192 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 RFESDQ8TAC1 157 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 DUX5Q96PT3 197 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 KIR2DL4Q99706 377 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 KRTAP4-7Q9BYR0 210 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 Q9H3A6 140 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 AAMDCQ9H7C9 122 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 C21orf62Q9NYP8 219 aa3.93□□□□□ -1.78
SSX9-202ENST00000608568 TIMM8BQ9Y5J9 83 aaPredicted RBP3.93□□□□□ -1.78
SSX9-202ENST00000608568 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.92□□□□□ -1.78
SSX9-202ENST00000608568 A0A0B4J2C4 111 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 TRBV10-2A0A0K0K1G8 114 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 TEX22C9J3V5 150 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 H3BMM0 161 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 TIMM23O14925 209 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 TCL1BO95988 128 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 IGKV3-15P01624 115 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 PATE4P0C8F1 98 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 LINC00694P0DN24 101 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 GP9P14770 177 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 LEPP41159 167 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 ZNF134P52741 427 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 EFNA4P52798 201 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 HERVK_113P61574 105 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 PDE6HQ13956 83 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 EBI3Q14213 229 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 GTSCR1Q86UQ5 136 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 UBE2WQ96B02 151 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 ODF3Q96PU9 254 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 PRO1854Q9UHT4 67 aa3.92□□□□□ -1.78
SSX9-202ENST00000608568 TRAV40A0A0B4J280 105 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 LOC389332A0A1B0GUA5 103 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 IQCF6A8MYZ5 107 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 F5H768 121 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 PROP1O75360 226 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 IGLV2-11P01706 119 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 PYYP10082 97 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 COX7CP15954 63 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 CD24P25063 80 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 GLRXP35754 106 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 HERVK_113P63121 156 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 SRSF9Q13242 221 aaKnown RBP eCLIP3.91□□□□□ -1.78
SSX9-202ENST00000608568 LAGE3Q14657 143 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 ALKBH6Q3KRA9 238 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 ORMDL2Q53FV1 153 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 PATE2Q6UY27 113 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 MAPKAPK5-AS1Q8N8E1 139 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 KIR2DL5BQ8NHK3 375 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 DUX3Q96PT4 197 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 PIMREGQ9BSJ6 248 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 NDUFA4L2Q9NRX3 87 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 GNG12Q9UBI6 72 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 COL7A1Q02388 2944 aa3.91□□□□□ -1.78
SSX9-202ENST00000608568 TRAV8-1A0A0A6YYK1 113 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 TRAV3A0A0B4J244 114 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 TRBV30A0A0K0K1B3 111 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 NDUFC2-KCTD14E9PQ53 114 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 H3BVH4 76 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 ATOX1O00244 68 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 PPP1R17O96001 155 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 IGLC6P0CF74 106 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 RPL7P18124 248 aaKnown RBP3.9□□□□□ -1.79
SSX9-202ENST00000608568 TIRAPP58753 221 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 GNG5P63218 68 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 LINC01620Q4KN68 170 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 GAGE2AQ6NT46 116 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 LYZL1Q6UWQ5 148 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 SCGB1D4Q6XE38 83 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 LINC00643Q86TS7 51 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.9□□□□□ -1.79
SSX9-202ENST00000608568 NUP37Q8NFH4 326 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 LINC00574Q9H8X3 128 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 CALYQ9NYX4 217 aa3.9□□□□□ -1.79
SSX9-202ENST00000608568 MRPL35Q9NZE8 188 aaKnown RBP3.9□□□□□ -1.79
SSX9-202ENST00000608568 TET2Q6N021 2002 aaPredicted RBP3.9□□□□□ -1.79
SSX9-202ENST00000608568 IGLV2-18A0A075B6J9 118 aa3.89□□□□□ -1.79
SSX9-202ENST00000608568 IGKV1D-37A0A075B6S9 117 aa3.89□□□□□ -1.79
SSX9-202ENST00000608568 IGHV1-69DA0A0B4J2H0 117 aa3.89□□□□□ -1.79
SSX9-202ENST00000608568 ZNF815PA8K554 130 aa3.89□□□□□ -1.79
SSX9-202ENST00000608568 OVOL1O14753 267 aa3.89□□□□□ -1.79
SSX9-202ENST00000608568 TRACP01848 142 aa3.89□□□□□ -1.79
SSX9-202ENST00000608568 COX6CP09669 75 aa3.89□□□□□ -1.79
SSX9-202ENST00000608568 CFC1BP0CG36 223 aa3.89□□□□□ -1.79
SSX9-202ENST00000608568 CFC1P0CG37 223 aa3.89□□□□□ -1.79
SSX9-202ENST00000608568 CNTFRP26992 372 aa3.89□□□□□ -1.79
SSX9-202ENST00000608568 DSCR9P59020 149 aa3.89□□□□□ -1.79
SSX9-202ENST00000608568 MORN5Q5VZ52 161 aa3.89□□□□□ -1.79
SSX9-202ENST00000608568 ZFP2Q6ZN57 461 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms