RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 Q0VG73 95 aa11.74□□□□□ -0.53
SHKBP1-227ENST00000602011 WFDC2Q14508 124 aa11.74□□□□□ -0.53
SHKBP1-227ENST00000602011 DMRTA1Q5VZB9 504 aa11.74□□□□□ -0.53
SHKBP1-227ENST00000602011 NIT1Q86X76 327 aa11.74□□□□□ -0.53
SHKBP1-227ENST00000602011 TCEAL7Q9BRU2 100 aa11.74□□□□□ -0.53
SHKBP1-227ENST00000602011 A0A087WX48 190 aa11.73□□□□□ -0.53
SHKBP1-227ENST00000602011 A0A0D9SG52 128 aa11.73□□□□□ -0.53
SHKBP1-227ENST00000602011 CTXND1A0A1B0GTU2 59 aa11.73□□□□□ -0.53
SHKBP1-227ENST00000602011 PEX7O00628 323 aa11.73□□□□□ -0.53
SHKBP1-227ENST00000602011 ARMS2P0C7Q2 107 aa11.73□□□□□ -0.53
SHKBP1-227ENST00000602011 C14orf177Q52M58 125 aa11.73□□□□□ -0.53
SHKBP1-227ENST00000602011 BAALCQ8WXS3 180 aa11.73□□□□□ -0.53
SHKBP1-227ENST00000602011 SFRP2Q96HF1 295 aa11.73□□□□□ -0.53
SHKBP1-227ENST00000602011 PHLDA3Q9Y5J5 127 aa11.73□□□□□ -0.53
SHKBP1-227ENST00000602011 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-227ENST00000602011 KRBOX1C9JBD0 128 aa11.72□□□□□ -0.53
SHKBP1-227ENST00000602011 SMLR1H3BR10 107 aa11.72□□□□□ -0.53
SHKBP1-227ENST00000602011 ARPC5O15511 151 aa11.72□□□□□ -0.53
SHKBP1-227ENST00000602011 ZNF345Q14585 488 aa11.72□□□□□ -0.53
SHKBP1-227ENST00000602011 C14orf178Q8N769 122 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-227ENST00000602011 SAMD10Q9BYL1 202 aa11.72□□□□□ -0.53
SHKBP1-227ENST00000602011 HMCN2Q8NDA2 5059 aa11.72□□□□□ -0.53
SHKBP1-227ENST00000602011 UBR4Q5T4S7 5183 aa11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 LRP1Q07954 4544 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 IGKV2D-24A0A075B6R9 120 aa11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 TRAV34A0A0B4J273 112 aa11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 A0A1B0GVG6 124 aa11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 LECT2O14960 151 aa11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 TPT1P13693 172 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 RPL36AP83881 106 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 FAM162BQ5T6X4 162 aa11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 SERTAD4-AS1Q5TG53 156 aa11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 ATRAIDQ6UW56 229 aa11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 RPL36ALQ969Q0 106 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 FMC1Q96HJ9 113 aa11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.53
SHKBP1-227ENST00000602011 TRBV6-1A0A0K0K1D8 114 aa11.7□□□□□ -0.54
SHKBP1-227ENST00000602011 H3BVH4 76 aa11.7□□□□□ -0.54
SHKBP1-227ENST00000602011 PKIAP61925 76 aa11.7□□□□□ -0.54
SHKBP1-227ENST00000602011 Q86TA4 180 aa11.7□□□□□ -0.54
SHKBP1-227ENST00000602011 ZFP82Q8N141 532 aa11.7□□□□□ -0.54
SHKBP1-227ENST00000602011 Q8N3U1 123 aa11.7□□□□□ -0.54
SHKBP1-227ENST00000602011 KCNRGQ8N5I3 272 aa11.7□□□□□ -0.54
SHKBP1-227ENST00000602011 JPT2Q9H910 190 aa11.7□□□□□ -0.54
SHKBP1-227ENST00000602011 KLK12Q9UKR0 248 aa11.7□□□□□ -0.54
SHKBP1-227ENST00000602011 TRBV7-3A0A075B6L6 115 aa11.69□□□□□ -0.54
SHKBP1-227ENST00000602011 FAM74A7A6NL05 159 aa11.69□□□□□ -0.54
SHKBP1-227ENST00000602011 FHITP49789 147 aa11.69□□□□□ -0.54
SHKBP1-227ENST00000602011 CRIP1P50238 77 aa11.69□□□□□ -0.54
SHKBP1-227ENST00000602011 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-227ENST00000602011 OXTP01178 125 aa11.68□□□□□ -0.54
SHKBP1-227ENST00000602011 UBE2G1P62253 170 aa11.68□□□□□ -0.54
SHKBP1-227ENST00000602011 ZNF674Q2M3X9 581 aa11.68□□□□□ -0.54
SHKBP1-227ENST00000602011 LINC01559Q495D7 138 aa11.68□□□□□ -0.54
SHKBP1-227ENST00000602011 AKR1C8PQ5T2L2 129 aa11.68□□□□□ -0.54
SHKBP1-227ENST00000602011 FAM74A4Q5TZK3 123 aa11.68□□□□□ -0.54
SHKBP1-227ENST00000602011 SCXQ7RTU7 201 aa11.68□□□□□ -0.54
SHKBP1-227ENST00000602011 OR10G8Q8NGN5 311 aa11.68□□□□□ -0.54
SHKBP1-227ENST00000602011 UBE2WQ96B02 151 aa11.68□□□□□ -0.54
SHKBP1-227ENST00000602011 Q9UF83 564 aa11.68□□□□□ -0.54
SHKBP1-227ENST00000602011 SH2D1AO60880 128 aa11.67□□□□□ -0.54
SHKBP1-227ENST00000602011 UBE2G2P60604 165 aa11.67□□□□□ -0.54
SHKBP1-227ENST00000602011 RPL7L1Q6DKI1 246 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-227ENST00000602011 STOML3Q8TAV4 291 aa11.67□□□□□ -0.54
SHKBP1-227ENST00000602011 ZC2HC1AQ96GY0 325 aa11.67□□□□□ -0.54
SHKBP1-227ENST00000602011 KANTRA0A1W2PQU2 76 aa11.66□□□□□ -0.54
SHKBP1-227ENST00000602011 M0R036 132 aa11.66□□□□□ -0.54
SHKBP1-227ENST00000602011 IGLV2-8P01709 118 aa11.66□□□□□ -0.54
SHKBP1-227ENST00000602011 S100A9P06702 114 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-227ENST00000602011 UBE2D3P61077 147 aa11.66□□□□□ -0.54
SHKBP1-227ENST00000602011 UBE2D2P62837 147 aa11.66□□□□□ -0.54
SHKBP1-227ENST00000602011 EIF5AP63241 154 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-227ENST00000602011 ZNF726P1Q15940 193 aa11.66□□□□□ -0.54
SHKBP1-227ENST00000602011 C1orf43Q9BWL3 253 aa11.66□□□□□ -0.54
SHKBP1-227ENST00000602011 A0A087WWL8 130 aa11.65□□□□□ -0.54
SHKBP1-227ENST00000602011 GRIFINA4D1Z8 144 aa11.65□□□□□ -0.54
SHKBP1-227ENST00000602011 TMEM262E9PQX1 116 aa11.65□□□□□ -0.54
SHKBP1-227ENST00000602011 M0R381 172 aa11.65□□□□□ -0.54
SHKBP1-227ENST00000602011 RAB4BP61018 213 aa11.65□□□□□ -0.54
SHKBP1-227ENST00000602011 LINC01620Q4KN68 170 aa11.65□□□□□ -0.54
SHKBP1-227ENST00000602011 TMEM97Q5BJF2 176 aa11.65□□□□□ -0.54
SHKBP1-227ENST00000602011 TMUB2Q71RG4 321 aa11.65□□□□□ -0.54
SHKBP1-227ENST00000602011 FAT3Q8TDW7 4589 aa11.65□□□□□ -0.55
SHKBP1-227ENST00000602011 TRBV6-8A0A0A6YYG3 113 aa11.64□□□□□ -0.55
SHKBP1-227ENST00000602011 PFDN1O60925 122 aa11.64□□□□□ -0.55
SHKBP1-227ENST00000602011 LTAP01374 205 aa11.64□□□□□ -0.55
SHKBP1-227ENST00000602011 CXCL1P09341 107 aa11.64□□□□□ -0.55
SHKBP1-227ENST00000602011 CYTL1Q9NRR1 136 aa11.64□□□□□ -0.55
SHKBP1-227ENST00000602011 BCL2L11O43521 198 aa11.63□□□□□ -0.55
SHKBP1-227ENST00000602011 CRPP02741 224 aa11.63□□□□□ -0.55
SHKBP1-227ENST00000602011 DGAT2L7PQ6IED9 249 aa11.63□□□□□ -0.55
SHKBP1-227ENST00000602011 CIRBP-AS1Q8TBR5 109 aa11.63□□□□□ -0.55
SHKBP1-227ENST00000602011 MAP1LC3B2A6NCE7 125 aa11.62□□□□□ -0.55
SHKBP1-227ENST00000602011 MAP1LC3BQ9GZQ8 125 aa11.62□□□□□ -0.55
SHKBP1-227ENST00000602011 MIAQ16674 131 aa11.61□□□□□ -0.55
SHKBP1-227ENST00000602011 ZNF471Q9BX82 626 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-227ENST00000602011 CST9LP1Q5W188 147 aa11.6□□□□□ -0.55
SHKBP1-227ENST00000602011 PRR27Q6MZM9 219 aa11.6□□□□□ -0.55
SHKBP1-227ENST00000602011 TMSB15BA0A087X1C1 80 aa11.59□□□□□ -0.55
SHKBP1-227ENST00000602011 AKR1C3P42330 323 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms