RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 FAM74A3Q4VXF1 159 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 KHDC3LQ587J8 217 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 TMEM78Q5T7P6 136 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 MIR17HGQ75NE6 70 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 EXOC3-AS1Q8N2X6 119 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 EIF4E3Q8N5X7 224 aaKnown RBP2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 C11orf72Q8NBR9 251 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 ZNF680Q8NEM1 530 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 OR2G3Q8NGZ4 309 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 SUN5Q8TC36 379 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 SCGB1C1Q8TD33 95 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 RXFP4Q8TDU9 374 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 AQP10Q96PS8 301 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 PSMG3Q9BT73 122 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 UPK3BQ9BT76 320 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 PPDPFQ9H3Y8 114 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 NOP10Q9NPE3 64 aaKnown RBP2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 HERC2O95714 4834 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 IGHV1OR15-1A0A075B7D0 117 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 LOC100131303A0A0U1RQF7 123 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 SERTM2A0A1B0GWG4 89 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 F5H768 121 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 OR7C2O60412 319 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 SPINK4O60575 86 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 MBP02144 154 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 GPX1P07203 203 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 GIPP09681 153 aaPredicted RBP2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 OR10J4P0C629 311 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 STAG3L2P0CL84 134 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 STAG3L3P0CL85 134 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 HTN1P15515 57 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 CSN1S1P47710 185 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 CCL18P55774 89 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 UBE2L3P68036 154 aaKnown RBP2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 ERCC8Q13216 396 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 SLAQ13239 276 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 BTN1A1Q13410 526 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 ACOT6Q3I5F7 207 aaPredicted RBP2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 TDRG1Q3Y452 100 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 SOHLH1Q5JUK2 328 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 FAM74A1Q5RGS3 127 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 Q6AWC8 147 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 UBE2DNLQ8IWF7 75 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 IQCF2Q8IXL9 164 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 ZNRF2Q8NHG8 242 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 BLNKQ8WV28 456 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 MED28Q9H204 178 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 WFDC1Q9HC57 220 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 OTORQ9NRC9 128 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 TNFSF18Q9UNG2 199 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 KLF12Q9Y4X4 402 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 ALG5Q9Y673 324 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 DNAH6Q9C0G6 4158 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 DNAH17Q9UFH2 4485 aa2.3□□□□□ -2.04
CKS1BP3-201ENST00000600888 DNAH2Q9P225 4427 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 TRAV26-1A0A087WT03 109 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 IGKV2-40A0A087WW87 121 aaPredicted RBP2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 NBDYA0A0U1RRE5 68 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 A0A1W2PPV4 95 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 PGPA6NDG6 321 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 IGKV2D-40P01614 121 aaPredicted RBP2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 HTN3P15516 51 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 ATP6V0CP27449 155 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 RNASE4P34096 147 aaKnown RBP2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 KRTAP10-8P60410 259 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 RANP62826 216 aaKnown RBP2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 PRR9Q5T870 116 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 Q6ZTI0 123 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 OR10G4Q8NGN3 311 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 OR10G9Q8NGN4 311 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 C7orf33Q8WU49 177 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 GNPNAT1Q96EK6 184 aaPredicted RBP2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 SMIM3Q9BZL3 60 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 PRO0255Q9UI72 69 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 LINC00588Q9Y4M8 146 aa2.29□□□□□ -2.04
CKS1BP3-201ENST00000600888 PKD1P98161 4303 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 KIAA1109Q2LD37 5005 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 IGLV2-18A0A075B6J9 118 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 TRGV2A0A075B6R0 118 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 A0A096LPF7 62 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 TRGV1A0A0A0MS02 117 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 TRAV21A0A0B4J279 112 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 A0A1W2PRE2 83 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 G3V3Q6 166 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 K7EP13 123 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 K7EQM0 130 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 M0R2N4 97 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 TAAR5O14804 337 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 ARL14EPLP0DKL9 152 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 PRB4P10163 310 aaPredicted RBP2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 CDC34P49427 236 aaPredicted RBP2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 CRYBA4P53673 196 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 RAB2AP61019 212 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 OR5I1Q13606 314 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 ESRGQ1W209 222 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 Q5BKY6 102 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 TTC32Q5I0X7 151 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 C1orf134Q5TEV5 83 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 Q6ZQT7 251 aa2.28□□□□□ -2.04
CKS1BP3-201ENST00000600888 SSX7Q7RTT5 188 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms