RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 SPXQ9BT56 116 aa11.21□□□□□ -0.61
SHKBP1-215ENST00000597649 XKRY2A2RUG3 117 aa11.2□□□□□ -0.62
SHKBP1-215ENST00000597649 C19orf71A6NCJ1 209 aa11.2□□□□□ -0.62
SHKBP1-215ENST00000597649 DNAH10OSP0CZ25 163 aa11.2□□□□□ -0.62
SHKBP1-215ENST00000597649 ERVFC1-1P60608 527 aa11.2□□□□□ -0.62
SHKBP1-215ENST00000597649 RPS20P60866 119 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-215ENST00000597649 ADIRFQ15847 76 aa11.2□□□□□ -0.62
SHKBP1-215ENST00000597649 CDPF1Q6NVV7 123 aa11.2□□□□□ -0.62
SHKBP1-215ENST00000597649 NUDT10Q8NFP7 164 aa11.2□□□□□ -0.62
SHKBP1-215ENST00000597649 FRZBQ92765 325 aa11.2□□□□□ -0.62
SHKBP1-215ENST00000597649 NUDT11Q96G61 164 aa11.2□□□□□ -0.62
SHKBP1-215ENST00000597649 TRGV1A0A0A0MS02 117 aa11.19□□□□□ -0.62
SHKBP1-215ENST00000597649 NXPH4O95158 308 aa11.19□□□□□ -0.62
SHKBP1-215ENST00000597649 RPL19P84098 196 aaKnown RBP11.19□□□□□ -0.62
SHKBP1-215ENST00000597649 RNASE7Q9H1E1 156 aaKnown RBP11.19□□□□□ -0.62
SHKBP1-215ENST00000597649 A0A087WTM6 91 aa11.18□□□□□ -0.62
SHKBP1-215ENST00000597649 TMEM218A2RU14 115 aa11.18□□□□□ -0.62
SHKBP1-215ENST00000597649 F8W036 122 aa11.18□□□□□ -0.62
SHKBP1-215ENST00000597649 EREGO14944 169 aa11.18□□□□□ -0.62
SHKBP1-215ENST00000597649 GATCO43716 136 aaKnown RBP11.18□□□□□ -0.62
SHKBP1-215ENST00000597649 RPL23P62829 140 aaKnown RBP11.18□□□□□ -0.62
SHKBP1-215ENST00000597649 C15orf54Q8N8G6 183 aa11.18□□□□□ -0.62
SHKBP1-215ENST00000597649 RPP21Q9H633 154 aaKnown RBP11.18□□□□□ -0.62
SHKBP1-215ENST00000597649 UBR4Q5T4S7 5183 aa11.17□□□□□ -0.62
SHKBP1-215ENST00000597649 H3BVH4 76 aa11.17□□□□□ -0.62
SHKBP1-215ENST00000597649 M0R2P5 195 aa11.17□□□□□ -0.62
SHKBP1-215ENST00000597649 SPINK4O60575 86 aa11.17□□□□□ -0.62
SHKBP1-215ENST00000597649 CXCL1P09341 107 aa11.17□□□□□ -0.62
SHKBP1-215ENST00000597649 ARMS2P0C7Q2 107 aa11.17□□□□□ -0.62
SHKBP1-215ENST00000597649 FAM231DQ6ZW35 169 aa11.17□□□□□ -0.62
SHKBP1-215ENST00000597649 C18orf15Q96N68 181 aa11.17□□□□□ -0.62
SHKBP1-215ENST00000597649 MRPL16Q9NX20 251 aaKnown RBP11.17□□□□□ -0.62
SHKBP1-215ENST00000597649 HMCN2Q8NDA2 5059 aa11.17□□□□□ -0.62
SHKBP1-215ENST00000597649 TRGV2A0A075B6R0 118 aa11.16□□□□□ -0.62
SHKBP1-215ENST00000597649 RNASE3P12724 160 aaKnown RBP11.16□□□□□ -0.62
SHKBP1-215ENST00000597649 HAMPP81172 84 aa11.16□□□□□ -0.62
SHKBP1-215ENST00000597649 DNLZQ5SXM8 178 aa11.16□□□□□ -0.62
SHKBP1-215ENST00000597649 ISOC2Q96AB3 205 aa11.16□□□□□ -0.62
SHKBP1-215ENST00000597649 C9orf85Q96MD7 179 aa11.16□□□□□ -0.62
SHKBP1-215ENST00000597649 IL36BQ9NZH7 164 aa11.16□□□□□ -0.62
SHKBP1-215ENST00000597649 PHLDA3Q9Y5J5 127 aa11.16□□□□□ -0.62
SHKBP1-215ENST00000597649 PNRC1Q12796 327 aaPredicted RBP11.15□□□□□ -0.62
SHKBP1-215ENST00000597649 SYT8Q8NBV8 401 aa11.15□□□□□ -0.62
SHKBP1-215ENST00000597649 OR10G8Q8NGN5 311 aa11.15□□□□□ -0.62
SHKBP1-215ENST00000597649 SFRP2Q96HF1 295 aa11.15□□□□□ -0.62
SHKBP1-215ENST00000597649 TPPP3Q9BW30 176 aa11.15□□□□□ -0.62
SHKBP1-215ENST00000597649 OSTCQ9NRP0 149 aa11.15□□□□□ -0.62
SHKBP1-215ENST00000597649 GZMBP10144 247 aa11.14□□□□□ -0.63
SHKBP1-215ENST00000597649 ZNF876PQ49A33 203 aa11.14□□□□□ -0.63
SHKBP1-215ENST00000597649 LYPD5Q6UWN5 251 aa11.14□□□□□ -0.63
SHKBP1-215ENST00000597649 A8MWL6 223 aa11.13□□□□□ -0.63
SHKBP1-215ENST00000597649 PAX4O43316 350 aa11.13□□□□□ -0.63
SHKBP1-215ENST00000597649 FER1L6-AS1Q8NA97 138 aa11.13□□□□□ -0.63
SHKBP1-215ENST00000597649 RASL10AQ92737 203 aa11.13□□□□□ -0.63
SHKBP1-215ENST00000597649 SEC11CQ9BY50 192 aa11.13□□□□□ -0.63
SHKBP1-215ENST00000597649 ICOSQ9Y6W8 199 aa11.13□□□□□ -0.63
SHKBP1-215ENST00000597649 LRP1Q07954 4544 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-215ENST00000597649 IGHV3-53P01767 116 aa11.12□□□□□ -0.63
SHKBP1-215ENST00000597649 GCSHP23434 173 aa11.12□□□□□ -0.63
SHKBP1-215ENST00000597649 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
SHKBP1-215ENST00000597649 NFE4Q86UQ8 179 aa11.12□□□□□ -0.63
SHKBP1-215ENST00000597649 ZFP82Q8N141 532 aa11.12□□□□□ -0.63
SHKBP1-215ENST00000597649 PTH2Q96A98 100 aa11.12□□□□□ -0.63
SHKBP1-215ENST00000597649 F2Z2F3 143 aa11.11□□□□□ -0.63
SHKBP1-215ENST00000597649 M0R381 172 aa11.11□□□□□ -0.63
SHKBP1-215ENST00000597649 OR5AL1P0C617 328 aa11.11□□□□□ -0.63
SHKBP1-215ENST00000597649 SSTP61278 116 aa11.11□□□□□ -0.63
SHKBP1-215ENST00000597649 NDUFA5Q16718 116 aa11.11□□□□□ -0.63
SHKBP1-215ENST00000597649 CT83Q5H943 113 aa11.11□□□□□ -0.63
SHKBP1-215ENST00000597649 FAM229AH3BQW9 127 aa11.1□□□□□ -0.63
SHKBP1-215ENST00000597649 PPP1R2P9O14990 202 aa11.1□□□□□ -0.63
SHKBP1-215ENST00000597649 SNAI2O43623 268 aa11.1□□□□□ -0.63
SHKBP1-215ENST00000597649 MT-ND4LP03901 98 aa11.1□□□□□ -0.63
SHKBP1-215ENST00000597649 IGLC6P0CF74 106 aa11.1□□□□□ -0.63
SHKBP1-215ENST00000597649 ADCYAP1P18509 176 aa11.1□□□□□ -0.63
SHKBP1-215ENST00000597649 CRYBA4P53673 196 aa11.1□□□□□ -0.63
SHKBP1-215ENST00000597649 FHL2Q14192 279 aa11.1□□□□□ -0.63
SHKBP1-215ENST00000597649 OR4C5Q8NGB2 326 aa11.1□□□□□ -0.63
SHKBP1-215ENST00000597649 SSBP4Q9BWG4 385 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-215ENST00000597649 MUC21A0A0G2JKD1 596 aa11.09□□□□□ -0.63
SHKBP1-215ENST00000597649 MUC21A0A140T8X8 626 aa11.09□□□□□ -0.63
SHKBP1-215ENST00000597649 CACNG7P62955 275 aa11.09□□□□□ -0.63
SHKBP1-215ENST00000597649 PIK3CD-AS1Q5SR53 167 aa11.09□□□□□ -0.63
SHKBP1-215ENST00000597649 DMRTA1Q5VZB9 504 aa11.09□□□□□ -0.63
SHKBP1-215ENST00000597649 LYZL1Q6UWQ5 148 aa11.09□□□□□ -0.63
SHKBP1-215ENST00000597649 OR10AG1Q8NH19 301 aa11.09□□□□□ -0.63
SHKBP1-215ENST00000597649 TSKUQ8WUA8 353 aa11.09□□□□□ -0.63
SHKBP1-215ENST00000597649 BORCS7Q96B45 105 aa11.09□□□□□ -0.63
SHKBP1-215ENST00000597649 MSRB1Q9NZV6 116 aa11.09□□□□□ -0.63
SHKBP1-215ENST00000597649 PRO0255Q9UI72 69 aa11.09□□□□□ -0.63
SHKBP1-215ENST00000597649 HHLA3Q9XRX5 114 aa11.09□□□□□ -0.63
SHKBP1-215ENST00000597649 V9GYV3 84 aa11.09□□□□□ -0.63
SHKBP1-215ENST00000597649 TRAV4A0A0B4J268 109 aa11.08□□□□□ -0.64
SHKBP1-215ENST00000597649 A8MWV9 139 aa11.08□□□□□ -0.64
SHKBP1-215ENST00000597649 WFDC10BQ8IUB3 73 aa11.08□□□□□ -0.64
SHKBP1-215ENST00000597649 SLC7A5P1Q8MH63 180 aa11.08□□□□□ -0.64
SHKBP1-215ENST00000597649 GFRA4Q9GZZ7 299 aa11.08□□□□□ -0.64
SHKBP1-215ENST00000597649 FAT3Q8TDW7 4589 aa11.07□□□□□ -0.64
SHKBP1-215ENST00000597649 TRAV9-2A0A087WT02 112 aa11.07□□□□□ -0.64
SHKBP1-215ENST00000597649 TRGV4A0A0C4DH28 118 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms