RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 RRN3P1Q2M238 152 aa8.54□□□□□ -1.04
DDX39A-219ENST00000592927 SYT8Q8NBV8 401 aa8.54□□□□□ -1.04
DDX39A-219ENST00000592927 PTH2Q96A98 100 aa8.54□□□□□ -1.04
DDX39A-219ENST00000592927 SPXQ9BT56 116 aa8.54□□□□□ -1.04
DDX39A-219ENST00000592927 IGHV4-28A0A0C4DH34 117 aa8.53□□□□□ -1.04
DDX39A-219ENST00000592927 A0A0J9YWU9 116 aa8.53□□□□□ -1.04
DDX39A-219ENST00000592927 PIK3CD-AS1Q5SR53 167 aa8.53□□□□□ -1.04
DDX39A-219ENST00000592927 DMRTA1Q5VZB9 504 aa8.53□□□□□ -1.04
DDX39A-219ENST00000592927 FAM104BQ5XKR9 115 aa8.53□□□□□ -1.04
DDX39A-219ENST00000592927 Q8NAQ8 132 aa8.53□□□□□ -1.04
DDX39A-219ENST00000592927 MDFICQ9P1T7 246 aa8.53□□□□□ -1.04
DDX39A-219ENST00000592927 TIMM8BQ9Y5J9 83 aaPredicted RBP8.53□□□□□ -1.04
DDX39A-219ENST00000592927 MUC4Q99102 2169 aa8.53□□□□□ -1.04
DDX39A-219ENST00000592927 MUC21A0A0G2JKD1 596 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 MUC21A0A140T8X8 626 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 M0R381 172 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 DEFB4AO15263 64 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 HIST1H2BKO60814 126 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 PRM2P04554 102 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 HIST1H2BJP06899 126 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 HIST1H2BOP23527 126 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 HIST1H2BBP33778 126 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 HIST1H2BDP58876 126 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 HIST1H2BCP62807 126 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 SLAQ13239 276 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 HIST2H2BEQ16778 126 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.52□□□□□ -1.05
DDX39A-219ENST00000592927 TMEM263Q8WUH6 116 aaKnown RBP8.52□□□□□ -1.05
DDX39A-219ENST00000592927 HIST1H2BHQ93079 126 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 AP1S3Q96PC3 154 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 HIST1H2BNQ99877 126 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 HIST1H2BMQ99879 126 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 NDUFAF3Q9BU61 184 aa8.52□□□□□ -1.05
DDX39A-219ENST00000592927 C11orf68Q9H3H3 251 aaKnown RBP8.52□□□□□ -1.05
DDX39A-219ENST00000592927 S100A6P06703 90 aa8.51□□□□□ -1.05
DDX39A-219ENST00000592927 EMP1P54849 157 aa8.51□□□□□ -1.05
DDX39A-219ENST00000592927 SSTP61278 116 aa8.51□□□□□ -1.05
DDX39A-219ENST00000592927 IL17DQ8TAD2 202 aa8.51□□□□□ -1.05
DDX39A-219ENST00000592927 C16orf74Q96GX8 76 aa8.51□□□□□ -1.05
DDX39A-219ENST00000592927 MSRB1Q9NZV6 116 aa8.51□□□□□ -1.05
DDX39A-219ENST00000592927 M0R2P5 195 aa8.5□□□□□ -1.05
DDX39A-219ENST00000592927 PPBPP02775 128 aa8.5□□□□□ -1.05
DDX39A-219ENST00000592927 AZU1P20160 251 aa8.5□□□□□ -1.05
DDX39A-219ENST00000592927 C11orf72Q8NBR9 251 aa8.5□□□□□ -1.05
DDX39A-219ENST00000592927 RNASE8Q8TDE3 154 aaKnown RBP8.5□□□□□ -1.05
DDX39A-219ENST00000592927 DPH3P1Q9H4G8 78 aa8.5□□□□□ -1.05
DDX39A-219ENST00000592927 SMIM17P0DL12 118 aa8.49□□□□□ -1.05
DDX39A-219ENST00000592927 RAB4AP20338 218 aa8.49□□□□□ -1.05
DDX39A-219ENST00000592927 SRIP30626 198 aa8.49□□□□□ -1.05
DDX39A-219ENST00000592927 KIAA1644Q3SXP7 199 aa8.49□□□□□ -1.05
DDX39A-219ENST00000592927 ZNF876PQ49A33 203 aa8.49□□□□□ -1.05
DDX39A-219ENST00000592927 OR10J3Q5JRS4 329 aa8.49□□□□□ -1.05
DDX39A-219ENST00000592927 AMN1Q8IY45 258 aa8.49□□□□□ -1.05
DDX39A-219ENST00000592927 ALKBH7Q9BT30 221 aaPredicted RBP8.49□□□□□ -1.05
DDX39A-219ENST00000592927 GSN-AS1Q9NRJ2 163 aa8.49□□□□□ -1.05
DDX39A-219ENST00000592927 KMT2AQ03164 3969 aa8.49□□□□□ -1.05
DDX39A-219ENST00000592927 EVI2AP22794 236 aa8.48□□□□□ -1.05
DDX39A-219ENST00000592927 Q0VG73 95 aa8.48□□□□□ -1.05
DDX39A-219ENST00000592927 DAZ2Q13117 558 aaKnown RBP8.48□□□□□ -1.05
DDX39A-219ENST00000592927 MRPL51Q4U2R6 128 aaKnown RBP8.48□□□□□ -1.05
DDX39A-219ENST00000592927 COA6Q5JTJ3 125 aaKnown RBP8.48□□□□□ -1.05
DDX39A-219ENST00000592927 ORMDL3Q8N138 153 aa8.48□□□□□ -1.05
DDX39A-219ENST00000592927 RNF185Q96GF1 192 aa8.48□□□□□ -1.05
DDX39A-219ENST00000592927 KRTAP4-5Q9BYR2 181 aa8.48□□□□□ -1.05
DDX39A-219ENST00000592927 LAMTOR2Q9Y2Q5 125 aa8.48□□□□□ -1.05
DDX39A-219ENST00000592927 A8MWV9 139 aa8.47□□□□□ -1.05
DDX39A-219ENST00000592927 SPART-AS1P0CW21 52 aa8.47□□□□□ -1.05
DDX39A-219ENST00000592927 CKS2P33552 79 aa8.47□□□□□ -1.05
DDX39A-219ENST00000592927 NDUFA6P56556 154 aa8.47□□□□□ -1.05
DDX39A-219ENST00000592927 LGALS9BQ3B8N2 356 aa8.47□□□□□ -1.05
DDX39A-219ENST00000592927 POM121L12Q8N7R1 296 aa8.47□□□□□ -1.05
DDX39A-219ENST00000592927 C11orf45Q8TAV5 145 aa8.47□□□□□ -1.05
DDX39A-219ENST00000592927 RASL10AQ92737 203 aa8.47□□□□□ -1.05
DDX39A-219ENST00000592927 MRAP2Q96G30 205 aa8.47□□□□□ -1.05
DDX39A-219ENST00000592927 TEX48A0A1B0GUV7 120 aa8.46□□□□□ -1.06
DDX39A-219ENST00000592927 PLAC8L1A1L4L8 177 aa8.46□□□□□ -1.06
DDX39A-219ENST00000592927 C5orf52A6NGY3 159 aa8.46□□□□□ -1.06
DDX39A-219ENST00000592927 FAM222AQ5U5X8 452 aa8.46□□□□□ -1.06
DDX39A-219ENST00000592927 C14orf178Q8N769 122 aaPredicted RBP8.46□□□□□ -1.06
DDX39A-219ENST00000592927 PRELID3AQ96N28 172 aa8.46□□□□□ -1.06
DDX39A-219ENST00000592927 DKK2Q9UBU2 259 aa8.46□□□□□ -1.06
DDX39A-219ENST00000592927 KIF25-AS1Q9Y6Z4 181 aa8.46□□□□□ -1.06
DDX39A-219ENST00000592927 LYRM9A8MSI8 78 aa8.45□□□□□ -1.06
DDX39A-219ENST00000592927 D6R8Y8 96 aa8.45□□□□□ -1.06
DDX39A-219ENST00000592927 PPP1R17O96001 155 aa8.45□□□□□ -1.06
DDX39A-219ENST00000592927 NANOS2P60321 138 aaKnown RBP8.45□□□□□ -1.06
DDX39A-219ENST00000592927 C18orf32Q8TCD1 76 aa8.45□□□□□ -1.06
DDX39A-219ENST00000592927 NOP10Q9NPE3 64 aaKnown RBP8.45□□□□□ -1.06
DDX39A-219ENST00000592927 CELA1Q9UNI1 258 aa8.45□□□□□ -1.06
DDX39A-219ENST00000592927 RHODO00212 210 aa8.44□□□□□ -1.06
DDX39A-219ENST00000592927 CIDEAO60543 219 aa8.44□□□□□ -1.06
DDX39A-219ENST00000592927 CRYGDP07320 174 aa8.44□□□□□ -1.06
DDX39A-219ENST00000592927 HOXA5P20719 270 aa8.44□□□□□ -1.06
DDX39A-219ENST00000592927 LINC00315P59091 139 aa8.44□□□□□ -1.06
DDX39A-219ENST00000592927 SNRPEP62304 92 aaKnown RBP8.44□□□□□ -1.06
DDX39A-219ENST00000592927 BAGE3Q86Y29 109 aa8.44□□□□□ -1.06
DDX39A-219ENST00000592927 NACAE9PAV3 2078 aa8.43□□□□□ -1.06
DDX39A-219ENST00000592927 RS1O15537 224 aa8.43□□□□□ -1.06
DDX39A-219ENST00000592927 MGPP08493 103 aa8.43□□□□□ -1.06
DDX39A-219ENST00000592927 DAD1P61803 113 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms