RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 CALML5Q9NZT1 146 aa1.63□□□□□ -2.15
TPM4-214ENST00000591645 RPL26L1Q9UNX3 145 aaKnown RBP1.63□□□□□ -2.15
TPM4-214ENST00000591645 HIGD1AQ9Y241 93 aa1.63□□□□□ -2.15
TPM4-214ENST00000591645 RNF11Q9Y3C5 154 aa1.63□□□□□ -2.15
TPM4-214ENST00000591645 NEBP20929 6669 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 TRAV13-1A0A0B4J241 112 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 LOC107984640A0A0U1RRK4 108 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 J3QR89 54 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 K7ERJ3 54 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 RER1O15258 196 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 SULT1C4O75897 302 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 PAEPP09466 180 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 PEBP1P30086 187 aaKnown RBP1.62□□□□□ -2.15
TPM4-214ENST00000591645 LSM3P62310 102 aaKnown RBP1.62□□□□□ -2.15
TPM4-214ENST00000591645 SLC38A11Q08AI6 406 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 KLRD1Q13241 179 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 NNATQ16517 81 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 ESRGQ1W209 222 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 Q6ZTI0 123 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 PHF5AQ7RTV0 110 aaKnown RBP1.62□□□□□ -2.15
TPM4-214ENST00000591645 LRRC28Q86X40 367 aaPredicted RBP1.62□□□□□ -2.15
TPM4-214ENST00000591645 OR8B3Q8NGG8 313 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 OR5H6Q8NGV6 325 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 PRELID3AQ96N28 172 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 C20orf166-AS1Q96NR2 134 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 C14orf132Q9NPU4 83 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 CCL26Q9Y258 94 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 LY96Q9Y6Y9 160 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 TANC1Q9C0D5 1861 aa1.62□□□□□ -2.15
TPM4-214ENST00000591645 MEIKINA0A087WXM9 373 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 A0A1W2PNN7 141 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 C5orf58C9J3I9 102 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 C17orf112F2Z3M2 114 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 H3BMG7 143 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 M0R2Z0 102 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 LYRM1O43325 122 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 TPST1O60507 370 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 CLPSP04118 112 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 BAALC-AS2P0C853 105 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 MPC1LP0DKB6 136 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 MGST1P10620 155 aaKnown RBP1.61□□□□□ -2.15
TPM4-214ENST00000591645 EVI2AP22794 236 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 KRTAP12-3P60328 96 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 ZNF345Q14585 488 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 ZNF791Q3KP31 576 aaPredicted RBP1.61□□□□□ -2.15
TPM4-214ENST00000591645 Q6ZQT0 140 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 ZNF826PQ6ZT77 177 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 TEX29Q8N6K0 151 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 LINC00301Q8NCQ3 95 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 TSTD1Q8NFU3 115 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 BRK1Q8WUW1 75 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 SMIM3Q9BZL3 60 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 CST9LQ9H4G1 147 aa1.61□□□□□ -2.15
TPM4-214ENST00000591645 MYO5AQ9Y4I1 1855 aaKnown RBP1.6□□□□□ -2.15
TPM4-214ENST00000591645 CACNA1CQ13936 2221 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 PI4KAP42356 2102 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 PCDH15Q96QU1 1955 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 IGKV1D-42A0A075B6H8 117 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 TRBV27A0A0K0K1C4 114 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 NDUFA2O43678 99 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 SHBGP04278 402 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 CTSDP07339 412 aaPredicted RBP1.6□□□□□ -2.15
TPM4-214ENST00000591645 RPL22P35268 128 aaKnown RBP1.6□□□□□ -2.15
TPM4-214ENST00000591645 RPL13AP3Q6NVV1 102 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 C7orf65Q6ZTY9 151 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 MMGT1Q8N4V1 131 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 OR5A2Q8NGI9 324 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 C1orf54Q8WWF1 131 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 CHCHD1Q96BP2 118 aaKnown RBP1.6□□□□□ -2.15
TPM4-214ENST00000591645 RETNLBQ9BQ08 111 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 SLC50A1Q9BRV3 221 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 CBLN4Q9NTU7 201 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 CCDC88CQ9P219 2028 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 CCDC171Q6TFL3 1326 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 DSPPQ9NZW4 1301 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 ROS1P08922 2347 aa1.6□□□□□ -2.15
TPM4-214ENST00000591645 CHD3Q12873 2000 aaKnown RBP1.59□□□□□ -2.15
TPM4-214ENST00000591645 TRAV3A0A0B4J244 114 aa1.59□□□□□ -2.15
TPM4-214ENST00000591645 SMIM24O75264 130 aa1.59□□□□□ -2.15
TPM4-214ENST00000591645 PGLYRP1O75594 196 aaPredicted RBP1.59□□□□□ -2.15
TPM4-214ENST00000591645 TPT1P13693 172 aaKnown RBP1.59□□□□□ -2.15
TPM4-214ENST00000591645 CRYGSP22914 178 aa1.59□□□□□ -2.15
TPM4-214ENST00000591645 RAB5CP51148 216 aa1.59□□□□□ -2.15
TPM4-214ENST00000591645 MRPS36P82909 103 aaKnown RBP1.59□□□□□ -2.15
TPM4-214ENST00000591645 HIST1H1AQ02539 215 aaPredicted RBP1.59□□□□□ -2.15
TPM4-214ENST00000591645 FAM216BQ8N7L0 139 aa1.59□□□□□ -2.15
TPM4-214ENST00000591645 C3orf56Q8N813 242 aa1.59□□□□□ -2.15
TPM4-214ENST00000591645 OR4S1Q8NGB4 309 aa1.59□□□□□ -2.15
TPM4-214ENST00000591645 OR5AC2Q9NZP5 309 aa1.59□□□□□ -2.15
TPM4-214ENST00000591645 PRO2289Q9P1D8 64 aa1.59□□□□□ -2.15
TPM4-214ENST00000591645 U3KQ87 197 aa1.59□□□□□ -2.15
TPM4-214ENST00000591645 MYLKQ15746 1914 aa1.59□□□□□ -2.15
TPM4-214ENST00000591645 MPDZO75970 2070 aa1.59□□□□□ -2.16
TPM4-214ENST00000591645 IGLV3-9A0A075B6K5 115 aa1.58□□□□□ -2.16
TPM4-214ENST00000591645 A0A096LPI6 279 aa1.58□□□□□ -2.16
TPM4-214ENST00000591645 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.58□□□□□ -2.16
TPM4-214ENST00000591645 TRAV1-1A0A0B4J248 108 aa1.58□□□□□ -2.16
TPM4-214ENST00000591645 A0A1B0GW64 132 aa1.58□□□□□ -2.16
TPM4-214ENST00000591645 OR2T8A6NH00 312 aa1.58□□□□□ -2.16
TPM4-214ENST00000591645 LY6LH3BQJ8 138 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms