RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 SAPCD1Q5SSQ6 148 aa8.85□□□□□ -0.99
CLPTM1-208ENST00000588274 KRTAP26-1Q6PEX3 210 aa8.85□□□□□ -0.99
CLPTM1-208ENST00000588274 LINC00299Q6ZSB3 139 aa8.85□□□□□ -0.99
CLPTM1-208ENST00000588274 COX8CQ7Z4L0 72 aa8.85□□□□□ -0.99
CLPTM1-208ENST00000588274 SFRP2Q96HF1 295 aa8.85□□□□□ -0.99
CLPTM1-208ENST00000588274 FAM210AQ96ND0 272 aa8.85□□□□□ -0.99
CLPTM1-208ENST00000588274 BATF3Q9NR55 127 aa8.85□□□□□ -0.99
CLPTM1-208ENST00000588274 URGCP-MRPS24S4R325 110 aa8.85□□□□□ -0.99
CLPTM1-208ENST00000588274 USP17L23D6RBM5 183 aa8.84□□□□□ -0.99
CLPTM1-208ENST00000588274 ARMS2P0C7Q2 107 aa8.84□□□□□ -0.99
CLPTM1-208ENST00000588274 SEC11BP0C7V7 166 aa8.84□□□□□ -0.99
CLPTM1-208ENST00000588274 S100A4P26447 101 aaKnown RBP8.84□□□□□ -0.99
CLPTM1-208ENST00000588274 MPV17L2Q567V2 206 aa8.84□□□□□ -0.99
CLPTM1-208ENST00000588274 FAM74A4Q5TZK3 123 aa8.84□□□□□ -0.99
CLPTM1-208ENST00000588274 ZC2HC1AQ96GY0 325 aa8.84□□□□□ -0.99
CLPTM1-208ENST00000588274 PSMG3Q9BT73 122 aaPredicted RBP8.84□□□□□ -0.99
CLPTM1-208ENST00000588274 A0A087WX48 190 aa8.83□□□□□ -1
CLPTM1-208ENST00000588274 TRBV10-1A0A0K0K1A3 114 aa8.83□□□□□ -1
CLPTM1-208ENST00000588274 A6NHS1 94 aa8.83□□□□□ -1
CLPTM1-208ENST00000588274 FABP5P3A8MUU1 101 aa8.83□□□□□ -1
CLPTM1-208ENST00000588274 B4DEV8 164 aa8.83□□□□□ -1
CLPTM1-208ENST00000588274 CIRBPQ14011 172 aaKnown RBP8.83□□□□□ -1
CLPTM1-208ENST00000588274 ZNF726P1Q15940 193 aa8.83□□□□□ -1
CLPTM1-208ENST00000588274 C14orf177Q52M58 125 aa8.83□□□□□ -1
CLPTM1-208ENST00000588274 C9orf163Q8N9P6 203 aa8.83□□□□□ -1
CLPTM1-208ENST00000588274 HSD17B11Q8NBQ5 300 aa8.83□□□□□ -1
CLPTM1-208ENST00000588274 OR10G8Q8NGN5 311 aa8.83□□□□□ -1
CLPTM1-208ENST00000588274 C1orf43Q9BWL3 253 aa8.83□□□□□ -1
CLPTM1-208ENST00000588274 TRBV6-8A0A0A6YYG3 113 aa8.82□□□□□ -1
CLPTM1-208ENST00000588274 A0A1W2PRE2 83 aa8.82□□□□□ -1
CLPTM1-208ENST00000588274 ATP6V0CP27449 155 aa8.82□□□□□ -1
CLPTM1-208ENST00000588274 Q0VG73 95 aa8.82□□□□□ -1
CLPTM1-208ENST00000588274 ELOBQ15370 118 aa8.82□□□□□ -1
CLPTM1-208ENST00000588274 SDIM1Q6ZPB5 146 aa8.82□□□□□ -1
CLPTM1-208ENST00000588274 TMEM167BQ9NRX6 74 aa8.82□□□□□ -1
CLPTM1-208ENST00000588274 TRBV7-3A0A075B6L6 115 aa8.81□□□□□ -1
CLPTM1-208ENST00000588274 GRIFINA4D1Z8 144 aa8.81□□□□□ -1
CLPTM1-208ENST00000588274 M0R036 132 aa8.81□□□□□ -1
CLPTM1-208ENST00000588274 SH2D1AO60880 128 aa8.81□□□□□ -1
CLPTM1-208ENST00000588274 CXorf1O96002 111 aa8.81□□□□□ -1
CLPTM1-208ENST00000588274 PRR27Q6MZM9 219 aa8.81□□□□□ -1
CLPTM1-208ENST00000588274 OR11H4Q8NGC9 324 aa8.81□□□□□ -1
CLPTM1-208ENST00000588274 PRR34Q9NV39 138 aa8.81□□□□□ -1
CLPTM1-208ENST00000588274 PEX7O00628 323 aa8.8□□□□□ -1
CLPTM1-208ENST00000588274 SSNA1O43805 119 aa8.8□□□□□ -1
CLPTM1-208ENST00000588274 LINC01559Q495D7 138 aa8.8□□□□□ -1
CLPTM1-208ENST00000588274 C15orf54Q8N8G6 183 aa8.8□□□□□ -1
CLPTM1-208ENST00000588274 S100ZQ8WXG8 99 aa8.8□□□□□ -1
CLPTM1-208ENST00000588274 NDUFA13Q9P0J0 144 aa8.8□□□□□ -1
CLPTM1-208ENST00000588274 M0R381 172 aa8.79□□□□□ -1
CLPTM1-208ENST00000588274 HLA-DQA1P01909 254 aa8.79□□□□□ -1
CLPTM1-208ENST00000588274 RPL36AP83881 106 aaKnown RBP8.79□□□□□ -1
CLPTM1-208ENST00000588274 SERF2P84101 59 aa8.79□□□□□ -1
CLPTM1-208ENST00000588274 ZNF674Q2M3X9 581 aa8.79□□□□□ -1
CLPTM1-208ENST00000588274 DGAT2L7PQ6IED9 249 aa8.79□□□□□ -1
CLPTM1-208ENST00000588274 Q6ZRU5 148 aa8.79□□□□□ -1
CLPTM1-208ENST00000588274 NTM-AS1Q6ZSK4 140 aa8.79□□□□□ -1
CLPTM1-208ENST00000588274 NEXN-AS1Q8NBZ9 246 aa8.79□□□□□ -1
CLPTM1-208ENST00000588274 RPL36ALQ969Q0 106 aaKnown RBP8.79□□□□□ -1
CLPTM1-208ENST00000588274 AQP10Q96PS8 301 aa8.79□□□□□ -1
CLPTM1-208ENST00000588274 FAM74A7A6NL05 159 aa8.78□□□□□ -1
CLPTM1-208ENST00000588274 TNFSF18Q9UNG2 199 aa8.78□□□□□ -1
CLPTM1-208ENST00000588274 PTTG1O95997 202 aa8.77□□□□□ -1.01
CLPTM1-208ENST00000588274 CRPP02741 224 aa8.77□□□□□ -1.01
CLPTM1-208ENST00000588274 ANGP03950 147 aaKnown RBP8.77□□□□□ -1.01
CLPTM1-208ENST00000588274 UBE2G2P60604 165 aa8.77□□□□□ -1.01
CLPTM1-208ENST00000588274 MIAQ16674 131 aa8.77□□□□□ -1.01
CLPTM1-208ENST00000588274 ZFP82Q8N141 532 aa8.77□□□□□ -1.01
CLPTM1-208ENST00000588274 ACTR3CQ9C0K3 210 aaPredicted RBP8.77□□□□□ -1.01
CLPTM1-208ENST00000588274 PHLDA3Q9Y5J5 127 aa8.77□□□□□ -1.01
CLPTM1-208ENST00000588274 TMSB15BA0A087X1C1 80 aa8.76□□□□□ -1.01
CLPTM1-208ENST00000588274 LTAP01374 205 aa8.76□□□□□ -1.01
CLPTM1-208ENST00000588274 MBP02144 154 aa8.76□□□□□ -1.01
CLPTM1-208ENST00000588274 CNBPP62633 177 aaKnown RBP8.76□□□□□ -1.01
CLPTM1-208ENST00000588274 RPL19P84098 196 aaKnown RBP8.76□□□□□ -1.01
CLPTM1-208ENST00000588274 FAM162BQ5T6X4 162 aa8.76□□□□□ -1.01
CLPTM1-208ENST00000588274 HIST1H2BAQ96A08 127 aa8.76□□□□□ -1.01
CLPTM1-208ENST00000588274 VAX2Q9UIW0 290 aa8.76□□□□□ -1.01
CLPTM1-208ENST00000588274 TRBV6-1A0A0K0K1D8 114 aa8.75□□□□□ -1.01
CLPTM1-208ENST00000588274 TMEM262E9PQX1 116 aa8.75□□□□□ -1.01
CLPTM1-208ENST00000588274 SLPIP03973 132 aa8.75□□□□□ -1.01
CLPTM1-208ENST00000588274 TPT1P13693 172 aaKnown RBP8.75□□□□□ -1.01
CLPTM1-208ENST00000588274 RAB4BP61018 213 aa8.75□□□□□ -1.01
CLPTM1-208ENST00000588274 RBX1P62877 108 aa8.75□□□□□ -1.01
CLPTM1-208ENST00000588274 ODF1Q14990 250 aa8.75□□□□□ -1.01
CLPTM1-208ENST00000588274 Q5BKY6 102 aa8.75□□□□□ -1.01
CLPTM1-208ENST00000588274 KCNIP4Q6PIL6 250 aa8.75□□□□□ -1.01
CLPTM1-208ENST00000588274 CLPSL2Q6UWE3 100 aa8.75□□□□□ -1.01
CLPTM1-208ENST00000588274 OR10AG1Q8NH19 301 aa8.75□□□□□ -1.01
CLPTM1-208ENST00000588274 ZFP30Q9Y2G7 519 aa8.75□□□□□ -1.01
CLPTM1-208ENST00000588274 CTXND1A0A1B0GTU2 59 aa8.74□□□□□ -1.01
CLPTM1-208ENST00000588274 IFNA7P01567 189 aa8.74□□□□□ -1.01
CLPTM1-208ENST00000588274 KIF25-AS1Q9Y6Z4 181 aa8.74□□□□□ -1.01
CLPTM1-208ENST00000588274 CHTF8P0CG12 524 aa8.73□□□□□ -1.01
CLPTM1-208ENST00000588274 RPL7L1Q6DKI1 246 aaKnown RBP8.73□□□□□ -1.01
CLPTM1-208ENST00000588274 LINC00269Q8N2A0 174 aa8.73□□□□□ -1.01
CLPTM1-208ENST00000588274 SPACA4Q8TDM5 124 aa8.73□□□□□ -1.01
CLPTM1-208ENST00000588274 FMC1Q96HJ9 113 aa8.73□□□□□ -1.01
CLPTM1-208ENST00000588274 CHCHD5Q9BSY4 110 aa8.73□□□□□ -1.01
CLPTM1-208ENST00000588274 A0A0D9SG52 128 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms