RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 LINC00467Q9BRT7 94 aa7.39□□□□□ -1.23
APOC1-201ENST00000586638 TMEM208Q9BTX3 173 aa7.39□□□□□ -1.23
APOC1-201ENST00000586638 DPH3P1Q9H4G8 78 aa7.39□□□□□ -1.23
APOC1-201ENST00000586638 ESDP10768 282 aa7.38□□□□□ -1.23
APOC1-201ENST00000586638 CKS2P33552 79 aa7.38□□□□□ -1.23
APOC1-201ENST00000586638 MORN3Q6PF18 240 aaPredicted RBP7.38□□□□□ -1.23
APOC1-201ENST00000586638 C14orf178Q8N769 122 aaPredicted RBP7.38□□□□□ -1.23
APOC1-201ENST00000586638 C11orf72Q8NBR9 251 aa7.38□□□□□ -1.23
APOC1-201ENST00000586638 SYT8Q8NBV8 401 aa7.38□□□□□ -1.23
APOC1-201ENST00000586638 OR10D4PQ8NGN7 298 aa7.38□□□□□ -1.23
APOC1-201ENST00000586638 URB1-AS1Q96HZ7 61 aa7.38□□□□□ -1.23
APOC1-201ENST00000586638 PACRGQ96M98 296 aaPredicted RBP7.38□□□□□ -1.23
APOC1-201ENST00000586638 NOTCH3Q9UM47 2321 aa7.38□□□□□ -1.23
APOC1-201ENST00000586638 NACAE9PAV3 2078 aa7.37□□□□□ -1.23
APOC1-201ENST00000586638 A0A087WWL8 130 aa7.37□□□□□ -1.23
APOC1-201ENST00000586638 AZU1P20160 251 aa7.37□□□□□ -1.23
APOC1-201ENST00000586638 B9D2Q9BPU9 175 aa7.37□□□□□ -1.23
APOC1-201ENST00000586638 GSN-AS1Q9NRJ2 163 aa7.37□□□□□ -1.23
APOC1-201ENST00000586638 MRPL16Q9NX20 251 aaKnown RBP7.37□□□□□ -1.23
APOC1-201ENST00000586638 GOLT1BQ9Y3E0 138 aa7.37□□□□□ -1.23
APOC1-201ENST00000586638 LOC389332A0A1B0GUA5 103 aa7.36□□□□□ -1.23
APOC1-201ENST00000586638 SMIM17P0DL12 118 aa7.36□□□□□ -1.23
APOC1-201ENST00000586638 AMTP48728 403 aa7.36□□□□□ -1.23
APOC1-201ENST00000586638 PMCHL1Q16048 86 aa7.36□□□□□ -1.23
APOC1-201ENST00000586638 FAM74A4Q5TZK3 123 aa7.36□□□□□ -1.23
APOC1-201ENST00000586638 NIT1Q86X76 327 aa7.36□□□□□ -1.23
APOC1-201ENST00000586638 FAM19A2Q8N3H0 131 aa7.36□□□□□ -1.23
APOC1-201ENST00000586638 TMEM18Q96B42 140 aa7.36□□□□□ -1.23
APOC1-201ENST00000586638 SAMD10Q9BYL1 202 aa7.36□□□□□ -1.23
APOC1-201ENST00000586638 KIF25-AS1Q9Y6Z4 181 aa7.36□□□□□ -1.23
APOC1-201ENST00000586638 HSBP1O75506 76 aa7.35□□□□□ -1.23
APOC1-201ENST00000586638 TNFRSF6BO95407 300 aa7.35□□□□□ -1.23
APOC1-201ENST00000586638 PPBPP02775 128 aa7.35□□□□□ -1.23
APOC1-201ENST00000586638 EGFEM1PQ0D2K5 195 aa7.35□□□□□ -1.23
APOC1-201ENST00000586638 ZNF876PQ49A33 203 aa7.35□□□□□ -1.23
APOC1-201ENST00000586638 FA2HQ7L5A8 372 aa7.35□□□□□ -1.23
APOC1-201ENST00000586638 NRACQ8N912 160 aa7.35□□□□□ -1.23
APOC1-201ENST00000586638 CSNK1G2-AS1Q8NCQ2 148 aa7.35□□□□□ -1.23
APOC1-201ENST00000586638 IL17DQ8TAD2 202 aa7.35□□□□□ -1.23
APOC1-201ENST00000586638 MRAP2Q96G30 205 aa7.35□□□□□ -1.23
APOC1-201ENST00000586638 C1QTNF4Q9BXJ3 329 aa7.35□□□□□ -1.23
APOC1-201ENST00000586638 MAP1LC3AQ9H492 121 aa7.35□□□□□ -1.23
APOC1-201ENST00000586638 COL7A1Q02388 2944 aa7.35□□□□□ -1.23
APOC1-201ENST00000586638 M0R2P5 195 aa7.34□□□□□ -1.23
APOC1-201ENST00000586638 NHLRC4P0CG21 123 aaPredicted RBP7.34□□□□□ -1.23
APOC1-201ENST00000586638 IFI27P40305 119 aaPredicted RBP7.34□□□□□ -1.23
APOC1-201ENST00000586638 LINC00315P59091 139 aa7.34□□□□□ -1.23
APOC1-201ENST00000586638 ZNF56Q15929 161 aa7.34□□□□□ -1.23
APOC1-201ENST00000586638 SUMO4Q6EEV6 95 aa7.34□□□□□ -1.23
APOC1-201ENST00000586638 RNASE8Q8TDE3 154 aaKnown RBP7.34□□□□□ -1.23
APOC1-201ENST00000586638 TMEM263Q8WUH6 116 aaKnown RBP7.34□□□□□ -1.23
APOC1-201ENST00000586638 RASL10AQ92737 203 aa7.34□□□□□ -1.23
APOC1-201ENST00000586638 CHCHD1Q96BP2 118 aaKnown RBP7.34□□□□□ -1.23
APOC1-201ENST00000586638 RPL39LQ96EH5 51 aaKnown RBP7.34□□□□□ -1.23
APOC1-201ENST00000586638 CSTL1Q9H114 145 aa7.34□□□□□ -1.23
APOC1-201ENST00000586638 IGHV1-24A0A0C4DH33 117 aa7.33□□□□□ -1.24
APOC1-201ENST00000586638 CRYGDP07320 174 aa7.33□□□□□ -1.24
APOC1-201ENST00000586638 LINC00614P0C842 121 aa7.33□□□□□ -1.24
APOC1-201ENST00000586638 ZNF705AQ6ZN79 300 aaPredicted RBP7.33□□□□□ -1.24
APOC1-201ENST00000586638 Q6ZWC4 215 aa7.33□□□□□ -1.24
APOC1-201ENST00000586638 POM121L12Q8N7R1 296 aa7.33□□□□□ -1.24
APOC1-201ENST00000586638 PRSS3P2Q8NHM4 247 aa7.33□□□□□ -1.24
APOC1-201ENST00000586638 SPXQ9BT56 116 aa7.33□□□□□ -1.24
APOC1-201ENST00000586638 ZMAT5Q9UDW3 170 aaKnown RBP7.33□□□□□ -1.24
APOC1-201ENST00000586638 LAMTOR2Q9Y2Q5 125 aa7.33□□□□□ -1.24
APOC1-201ENST00000586638 IGHV3-73A0A0B4J1V6 119 aa7.32□□□□□ -1.24
APOC1-201ENST00000586638 F5H697 171 aa7.32□□□□□ -1.24
APOC1-201ENST00000586638 SMIM6P0DI80 62 aa7.32□□□□□ -1.24
APOC1-201ENST00000586638 PYY3Q5JQD4 70 aa7.32□□□□□ -1.24
APOC1-201ENST00000586638 CDPF1Q6NVV7 123 aa7.32□□□□□ -1.24
APOC1-201ENST00000586638 C16orf74Q96GX8 76 aa7.32□□□□□ -1.24
APOC1-201ENST00000586638 DNAH9Q9NYC9 4486 aa7.31□□□□□ -1.24
APOC1-201ENST00000586638 TRGV1A0A0A0MS02 117 aa7.31□□□□□ -1.24
APOC1-201ENST00000586638 PLAC8L1A1L4L8 177 aa7.31□□□□□ -1.24
APOC1-201ENST00000586638 C3orf84H3BNL1 204 aa7.31□□□□□ -1.24
APOC1-201ENST00000586638 IGHV4-30-4P0DP06 118 aa7.31□□□□□ -1.24
APOC1-201ENST00000586638 RRN3P1Q2M238 152 aa7.31□□□□□ -1.24
APOC1-201ENST00000586638 LINC00518Q8N0U6 118 aa7.31□□□□□ -1.24
APOC1-201ENST00000586638 PTH2Q96A98 100 aa7.31□□□□□ -1.24
APOC1-201ENST00000586638 SMIM2Q9BVW6 85 aa7.31□□□□□ -1.24
APOC1-201ENST00000586638 AP5S1Q9NUS5 200 aa7.31□□□□□ -1.24
APOC1-201ENST00000586638 IGLV2-18A0A075B6J9 118 aa7.3□□□□□ -1.24
APOC1-201ENST00000586638 A8MWV9 139 aa7.3□□□□□ -1.24
APOC1-201ENST00000586638 RS1O15537 224 aa7.3□□□□□ -1.24
APOC1-201ENST00000586638 APOC4P55056 127 aa7.3□□□□□ -1.24
APOC1-201ENST00000586638 DEFB135Q30KP9 77 aa7.3□□□□□ -1.24
APOC1-201ENST00000586638 CFAP126Q5VTH2 177 aa7.3□□□□□ -1.24
APOC1-201ENST00000586638 UFSP1Q6NVU6 142 aa7.3□□□□□ -1.24
APOC1-201ENST00000586638 Q6ZTI0 123 aa7.3□□□□□ -1.24
APOC1-201ENST00000586638 LINC00173Q6ZV60 143 aa7.3□□□□□ -1.24
APOC1-201ENST00000586638 NEGR1Q7Z3B1 354 aa7.3□□□□□ -1.24
APOC1-201ENST00000586638 Q8N8P6 123 aa7.3□□□□□ -1.24
APOC1-201ENST00000586638 C12orf57Q99622 126 aa7.3□□□□□ -1.24
APOC1-201ENST00000586638 NOP10Q9NPE3 64 aaKnown RBP7.3□□□□□ -1.24
APOC1-201ENST00000586638 NXT2Q9NPJ8 142 aaKnown RBP7.3□□□□□ -1.24
APOC1-201ENST00000586638 X6R8D5 127 aa7.3□□□□□ -1.24
APOC1-201ENST00000586638 A0A096LNJ9 63 aa7.29□□□□□ -1.24
APOC1-201ENST00000586638 KIR2DL5BA0A0G2JN68 375 aa7.29□□□□□ -1.24
APOC1-201ENST00000586638 KIR2DL5BA0A0G2JPC4 375 aa7.29□□□□□ -1.24
APOC1-201ENST00000586638 KRTDAPP60985 99 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms