RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SCGB2B2Q4G0G5 96 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 TEX261Q6UWH6 196 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 ZNF818PQ6ZRF7 136 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 PDZD9Q8IXQ8 264 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 OR4B1Q8NGF8 309 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 RMI2Q96E14 147 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 MIXL1Q9H2W2 232 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 OTORQ9NRC9 128 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 ARFGEF3Q5TH69 2177 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 DNAH17Q9UFH2 4485 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 DNAH2Q9P225 4427 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 DNAJC13O75165 2243 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 ZNF407Q9C0G0 2248 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 HEATR1Q9H583 2144 aaKnown RBP1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 ACANP16112 2415 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 IGKV1-6A0A0C4DH72 117 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 LYNX1G3V0Z9 82 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 K7EMI3 77 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 DNASE2O00115 360 aaPredicted RBP1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 LYNX1P0DP58 116 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 GZMBP10144 247 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 DHRS2Q13268 280 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 OR5H6Q8NGV6 325 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 RNF185Q96GF1 192 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 RTBDNQ9BSG5 229 aaPredicted RBP1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 SHANK2-AS3Q9BTD1 123 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 MS4A6AQ9H2W1 248 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 ZNF355PQ9NSJ1 428 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 UBR4Q5T4S7 5183 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 IGLV4-69A0A075B6H9 119 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 C2orf70A6NJV1 201 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 ZNF98A6NK75 572 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 H3BRN7 92 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 K7EIM0 57 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 PDE6DO43924 150 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 OR5G3P0C626 314 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 HIST1H1AQ02539 215 aaPredicted RBP1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 AKR1C1Q04828 323 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 SPCS2Q15005 226 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 DEFB116Q30KQ4 102 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 C9orf129Q5T035 196 aaKnown RBP1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 BAP18Q8IXM2 172 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 C11orf72Q8NBR9 251 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 FAM104AQ969W3 186 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 GPR146Q96CH1 333 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 TUBA4BQ9H853 241 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 MED9Q9NWA0 146 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 DSCAML1Q8TD84 2053 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 VPS13BQ7Z7G8 4022 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 TRAV5A0A0B4J249 113 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 CTXND1A0A1B0GTU2 59 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 H7BYZ3 331 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 REG1AP05451 166 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 M6PRP20645 277 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 H2BFSP57053 126 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 FXYD4P59646 89 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 CTAG1AP78358 180 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 SLC38A11Q08AI6 406 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 DEFB114Q30KQ6 69 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 FAM78BQ5VT40 261 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 C10orf113Q5VZT2 155 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 C10orf126Q8N4M7 172 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 SLC25A29Q8N8R3 303 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 OR11H1Q8NG94 326 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 ACY3Q96HD9 319 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 DNAJC30Q96LL9 226 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 MYO7BQ6PIF6 2116 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 A0A087WWC5 75 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 IGHV6-1A0A0B4J1U7 121 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 TRAV10A0A0B4J240 114 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 A0A1B0GVY2 172 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 PLAC8L1A1L4L8 177 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 A6NED7 52 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 KRTAP16-1A8MUX0 517 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 IGLC1P0CG04 106 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 HLA-DRB4P13762 266 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 MDKP21741 143 aaPredicted RBP1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 CBLN1P23435 193 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 PRR3P79522 188 aaKnown RBP1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 KLRD1Q13241 179 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 IL15RAQ13261 267 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 LDLRAD2Q5SZI1 272 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 AKR1C8PQ5T2L2 129 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 LCE1FQ5T754 118 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 OR10K2Q6IF99 312 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 BRD3OSQ6XYD6 125 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 SMIM15Q7Z3B0 74 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 TMEM75Q8N9X5 138 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 C5orf17Q8NAS9 161 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 MUC7Q8TAX7 377 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 CMTM2Q8TAZ6 248 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 BORCS7Q96B45 105 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 IGF2BP2-AS1Q96M15 143 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 TM2D3Q9BRN9 247 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 TTTY10Q9BZA0 68 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 PRR34Q9NV39 138 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 FUT9Q9Y231 359 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 HLA-DRB4X5D2U9 266 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 NBEAL2Q6ZNJ1 2754 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 SVEP1Q4LDE5 3571 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms