RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 G3V318 75 aa3.33□□□□□ -1.88
CDH8-205ENST00000577730 CRYGDP07320 174 aa3.33□□□□□ -1.88
CDH8-205ENST00000577730 PATE3B3GLJ2 98 aa3.33□□□□□ -1.88
CDH8-205ENST00000577730 LINC01561Q8N1V8 128 aa3.33□□□□□ -1.88
CDH8-205ENST00000577730 LINC01560Q8TB33 94 aa3.33□□□□□ -1.88
CDH8-205ENST00000577730 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.33□□□□□ -1.88
CDH8-205ENST00000577730 PDCD11Q14690 1871 aaKnown RBP3.33□□□□□ -1.88
CDH8-205ENST00000577730 K7EQD1 137 aa3.33□□□□□ -1.88
CDH8-205ENST00000577730 ZNF672Q499Z4 452 aaPredicted RBP3.33□□□□□ -1.88
CDH8-205ENST00000577730 BRI3O95415 125 aa3.33□□□□□ -1.88
CDH8-205ENST00000577730 TSPEAR-AS2P59090 65 aa3.33□□□□□ -1.88
CDH8-205ENST00000577730 LINC00846Q9NV44 126 aa3.33□□□□□ -1.88
CDH8-205ENST00000577730 IGLV4-69A0A075B6H9 119 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 IBA57-AS1B1ANH7 110 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 GAS8-AS1O95177 125 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 ITGB4P16144 1822 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 COL8A2P25067 703 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 Q0VFX4 171 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 OXLD1Q5BKU9 147 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 Q8N3U1 123 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 PIP4P2Q8N4L2 257 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 E7EUB6 86 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 TRBV6-5A0A0K0K1A5 114 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 CNFNQ9BYD5 112 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 FHL3Q13643 280 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 FAM19A1Q7Z5A9 133 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 PIP4P1Q86T03 277 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 WFDC10AQ9H1F0 79 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 ZFAND3Q9H8U3 227 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 TTC3P53804 2025 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 ZNF883P0CG24 379 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 HILS1P60008 231 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 SPAG11BQ08648 103 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 NPBQ8NG41 125 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 SHANK3Q9BYB0 1731 aa3.32□□□□□ -1.88
CDH8-205ENST00000577730 IGLV3-9A0A075B6K5 115 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 DEFB130BP0DP73 79 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 DEFB130AP0DP74 79 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 RPL28P46779 137 aaKnown RBP3.31□□□□□ -1.88
CDH8-205ENST00000577730 SPAG17Q6Q759 2223 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 ETDCA0A1B0GVM5 59 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 H3BUA1 57 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 DEFB112Q30KQ8 113 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 IL17DQ8TAD2 202 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 SMIM11BQ8TCY0 68 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 CKAP5Q14008 2032 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 IGHV4OR15-8A0A075B7B6 117 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 A0A087WW49 117 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 IGIPA6NJ69 53 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 NTM-AS1Q6ZSK4 140 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 POM121L12Q8N7R1 296 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 RITA1Q96K30 269 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 MIA3Q5JRA6 1907 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 DCANP1Q8TF63 244 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 KAAG1Q9UBP8 84 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 RALGAPA2Q2PPJ7 1873 aa3.31□□□□□ -1.88
CDH8-205ENST00000577730 POLR2KP53803 58 aaKnown RBP3.3□□□□□ -1.88
CDH8-205ENST00000577730 C22orf34Q6ZV56 151 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 LIMD2Q9BT23 127 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 NRXN2Q9P2S2 1712 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 IGLV1-44P01699 117 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 DEFB124Q8NES8 71 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 FAM30AQ9NZY2 134 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 LINC01548A6NM66 108 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 NANOS2P60321 138 aaKnown RBP3.3□□□□□ -1.88
CDH8-205ENST00000577730 DEFB121Q5J5C9 76 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 Q6ZSV7 163 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 FHL2Q14192 279 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 C6orf99Q4VX62 202 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 MDS2Q8NDY4 140 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 COL18A1P39060 1754 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 PRRC2BQ5JSZ5 2229 aaKnown RBP3.3□□□□□ -1.88
CDH8-205ENST00000577730 BEAN1Q3B7T3 259 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 ESM1Q9NQ30 184 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 GREB1LQ9C091 1923 aaPredicted RBP3.3□□□□□ -1.88
CDH8-205ENST00000577730 H3BUX3 64 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 K7ENP7 123 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 ANGP03950 147 aaKnown RBP3.3□□□□□ -1.88
CDH8-205ENST00000577730 ADAMTSL1Q8N6G6 1762 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 MTCL1Q9Y4B5 1905 aaKnown RBP3.3□□□□□ -1.88
CDH8-205ENST00000577730 M0QY20 66 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 CLPSL2Q6UWE3 100 aa3.3□□□□□ -1.88
CDH8-205ENST00000577730 RBBP6Q7Z6E9 1792 aaKnown RBP3.29□□□□□ -1.88
CDH8-205ENST00000577730 TSHBP01222 138 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 Q6ZQY7 126 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 LINC00269Q8N2A0 174 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 A0A087WYN8 130 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 LHBP01229 141 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 COX6B1P14854 86 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 CELA1Q9UNI1 258 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 A0A087WZ39 114 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 LINC01546A6NGU7 62 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 LINC00467Q9BRT7 94 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 C11orf21Q9P2W6 132 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 IGLV2-18A0A075B6J9 118 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 ADAMTSL4-AS1Q5T5F5 129 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 UBE2D4Q9Y2X8 147 aa3.29□□□□□ -1.88
CDH8-205ENST00000577730 THSD7AQ9UPZ6 1657 aa3.28□□□□□ -1.88
CDH8-205ENST00000577730 SBF2Q86WG5 1849 aa3.28□□□□□ -1.88
CDH8-205ENST00000577730 LINC01547P58512 204 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms