RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 TM2D2Q9BX73 214 aa12.57□□□□□ -0.4
LINC01238-205ENST00000567549 PSG8Q9UQ74 426 aa12.57□□□□□ -0.4
LINC01238-205ENST00000567549 IGLV5-52A0A0A0MRZ9 124 aa12.56□□□□□ -0.4
LINC01238-205ENST00000567549 IBA57-AS1B1ANH7 110 aa12.56□□□□□ -0.4
LINC01238-205ENST00000567549 S100A4P26447 101 aaKnown RBP12.56□□□□□ -0.4
LINC01238-205ENST00000567549 SUMO1P63165 101 aaKnown RBP12.56□□□□□ -0.4
LINC01238-205ENST00000567549 PNRC1Q12796 327 aaPredicted RBP12.56□□□□□ -0.4
LINC01238-205ENST00000567549 LAGE3Q14657 143 aa12.56□□□□□ -0.4
LINC01238-205ENST00000567549 CFAP126Q5VTH2 177 aa12.56□□□□□ -0.4
LINC01238-205ENST00000567549 GTSF1LQ9H1H1 148 aa12.56□□□□□ -0.4
LINC01238-205ENST00000567549 EPDR1Q9UM22 224 aa12.56□□□□□ -0.4
LINC01238-205ENST00000567549 A8MWV9 139 aa12.55□□□□□ -0.4
LINC01238-205ENST00000567549 TMEM241Q24JQ0 296 aa12.55□□□□□ -0.4
LINC01238-205ENST00000567549 PRNTQ86SH4 94 aa12.55□□□□□ -0.4
LINC01238-205ENST00000567549 ATP6V0E2Q8NHE4 81 aa12.55□□□□□ -0.4
LINC01238-205ENST00000567549 C11orf52Q96A22 123 aa12.55□□□□□ -0.4
LINC01238-205ENST00000567549 SMIM7Q9BQ49 75 aa12.55□□□□□ -0.4
LINC01238-205ENST00000567549 NAT8Q9UHE5 227 aa12.55□□□□□ -0.4
LINC01238-205ENST00000567549 LOC100131303A0A0U1RQF7 123 aa12.54□□□□□ -0.4
LINC01238-205ENST00000567549 B4DEV8 164 aa12.54□□□□□ -0.4
LINC01238-205ENST00000567549 FAM229AH3BQW9 127 aa12.54□□□□□ -0.4
LINC01238-205ENST00000567549 M0R036 132 aa12.54□□□□□ -0.4
LINC01238-205ENST00000567549 INAFM2P0DMQ5 153 aa12.54□□□□□ -0.4
LINC01238-205ENST00000567549 ZFP2Q6ZN57 461 aa12.54□□□□□ -0.4
LINC01238-205ENST00000567549 SGK494Q96LW2 274 aa12.54□□□□□ -0.4
LINC01238-205ENST00000567549 C9orf85Q96MD7 179 aa12.54□□□□□ -0.4
LINC01238-205ENST00000567549 TMEM70Q9BUB7 260 aa12.54□□□□□ -0.4
LINC01238-205ENST00000567549 PARLQ9H300 379 aa12.54□□□□□ -0.4
LINC01238-205ENST00000567549 RHEBQ15382 184 aa12.53□□□□□ -0.4
LINC01238-205ENST00000567549 DNAH5Q8TE73 4624 aa12.52□□□□□ -0.4
LINC01238-205ENST00000567549 A0A087WWC5 75 aa12.52□□□□□ -0.41
LINC01238-205ENST00000567549 FABP5P3A8MUU1 101 aa12.52□□□□□ -0.41
LINC01238-205ENST00000567549 ASIPP42127 132 aa12.52□□□□□ -0.41
LINC01238-205ENST00000567549 XGP55808 180 aa12.52□□□□□ -0.41
LINC01238-205ENST00000567549 ZNF674Q2M3X9 581 aa12.52□□□□□ -0.41
LINC01238-205ENST00000567549 Q5VSD8 79 aa12.52□□□□□ -0.41
LINC01238-205ENST00000567549 SYT8Q8NBV8 401 aa12.52□□□□□ -0.41
LINC01238-205ENST00000567549 HIST1H2BAQ96A08 127 aa12.52□□□□□ -0.41
LINC01238-205ENST00000567549 APOBP04114 4563 aaKnown RBP12.51□□□□□ -0.41
LINC01238-205ENST00000567549 TRAV8-3A0A0A6YYJ7 113 aa12.51□□□□□ -0.41
LINC01238-205ENST00000567549 SCO2A0A1W2PP80 73 aa12.51□□□□□ -0.41
LINC01238-205ENST00000567549 GGTLC3B5MD39 225 aa12.51□□□□□ -0.41
LINC01238-205ENST00000567549 S100A9P06702 114 aaKnown RBP12.51□□□□□ -0.41
LINC01238-205ENST00000567549 ATRAIDQ6UW56 229 aa12.51□□□□□ -0.41
LINC01238-205ENST00000567549 Q9HAA7 133 aa12.51□□□□□ -0.41
LINC01238-205ENST00000567549 COX11Q9Y6N1 276 aa12.51□□□□□ -0.41
LINC01238-205ENST00000567549 IGHV3-73A0A0B4J1V6 119 aa12.5□□□□□ -0.41
LINC01238-205ENST00000567549 RHODO00212 210 aa12.5□□□□□ -0.41
LINC01238-205ENST00000567549 ZNF80P51504 273 aaPredicted RBP12.5□□□□□ -0.41
LINC01238-205ENST00000567549 KRTAP10-1P60331 282 aa12.5□□□□□ -0.41
LINC01238-205ENST00000567549 C7orf77A4D0Y5 90 aa12.49□□□□□ -0.41
LINC01238-205ENST00000567549 PGPEP1LA6NFU8 196 aa12.49□□□□□ -0.41
LINC01238-205ENST00000567549 IGLV2-11P01706 119 aa12.49□□□□□ -0.41
LINC01238-205ENST00000567549 Q8N814 137 aa12.49□□□□□ -0.41
LINC01238-205ENST00000567549 RMI2Q96E14 147 aa12.49□□□□□ -0.41
LINC01238-205ENST00000567549 RPS10P5Q9NQ39 176 aa12.49□□□□□ -0.41
LINC01238-205ENST00000567549 URGCP-MRPS24S4R325 110 aa12.49□□□□□ -0.41
LINC01238-205ENST00000567549 SCO1O75880 301 aa12.48□□□□□ -0.41
LINC01238-205ENST00000567549 IGHV3-30P01768 117 aa12.48□□□□□ -0.41
LINC01238-205ENST00000567549 IGHV3-33P01772 117 aa12.48□□□□□ -0.41
LINC01238-205ENST00000567549 IGHV3-30-3P0DP02 117 aa12.48□□□□□ -0.41
LINC01238-205ENST00000567549 IGHV3-30-5P0DP03 117 aa12.48□□□□□ -0.41
LINC01238-205ENST00000567549 RNASE3P12724 160 aaKnown RBP12.48□□□□□ -0.41
LINC01238-205ENST00000567549 FUSP35637 526 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC01238-205ENST00000567549 SMCO4Q9NRQ5 59 aa12.48□□□□□ -0.41
LINC01238-205ENST00000567549 IL36BQ9NZH7 164 aa12.48□□□□□ -0.41
LINC01238-205ENST00000567549 C11orf21Q9P2W6 132 aa12.48□□□□□ -0.41
LINC01238-205ENST00000567549 ZFP30Q9Y2G7 519 aa12.48□□□□□ -0.41
LINC01238-205ENST00000567549 LRCOL1A6NCL2 159 aa12.47□□□□□ -0.41
LINC01238-205ENST00000567549 PEX7O00628 323 aa12.47□□□□□ -0.41
LINC01238-205ENST00000567549 AKR1C3P42330 323 aa12.47□□□□□ -0.41
LINC01238-205ENST00000567549 RPL35P42766 123 aaKnown RBP12.47□□□□□ -0.41
LINC01238-205ENST00000567549 MT-ND4LP03901 98 aa12.46□□□□□ -0.41
LINC01238-205ENST00000567549 UBE2G1P62253 170 aa12.46□□□□□ -0.41
LINC01238-205ENST00000567549 RPL23P62829 140 aaKnown RBP12.46□□□□□ -0.41
LINC01238-205ENST00000567549 ADIRFQ15847 76 aa12.46□□□□□ -0.41
LINC01238-205ENST00000567549 KCNIP4Q6PIL6 250 aa12.46□□□□□ -0.41
LINC01238-205ENST00000567549 CTDSP1Q9GZU7 261 aa12.46□□□□□ -0.41
LINC01238-205ENST00000567549 GNG4P50150 75 aa12.45□□□□□ -0.42
LINC01238-205ENST00000567549 Q6ZSN1 163 aa12.45□□□□□ -0.42
LINC01238-205ENST00000567549 FMC1Q96HJ9 113 aa12.45□□□□□ -0.42
LINC01238-205ENST00000567549 DERL1Q9BUN8 251 aa12.45□□□□□ -0.42
LINC01238-205ENST00000567549 KRTAP3-3Q9BYR6 98 aa12.45□□□□□ -0.42
LINC01238-205ENST00000567549 KRTAP3-2Q9BYR7 98 aa12.45□□□□□ -0.42
LINC01238-205ENST00000567549 TMEM242Q9NWH2 141 aa12.45□□□□□ -0.42
LINC01238-205ENST00000567549 GAGE12JA6NER3 117 aa12.44□□□□□ -0.42
LINC01238-205ENST00000567549 GAGE1Q13065 139 aa12.44□□□□□ -0.42
LINC01238-205ENST00000567549 GAGE4Q13068 117 aa12.44□□□□□ -0.42
LINC01238-205ENST00000567549 GAGE5Q13069 117 aa12.44□□□□□ -0.42
LINC01238-205ENST00000567549 GAGE13Q4V321 117 aa12.44□□□□□ -0.42
LINC01238-205ENST00000567549 Q86TA4 180 aa12.44□□□□□ -0.42
LINC01238-205ENST00000567549 ANAPC16Q96DE5 110 aa12.44□□□□□ -0.42
LINC01238-205ENST00000567549 PPP1R2P9O14990 202 aa12.43□□□□□ -0.42
LINC01238-205ENST00000567549 ELOBQ15370 118 aa12.43□□□□□ -0.42
LINC01238-205ENST00000567549 DNLZQ5SXM8 178 aa12.43□□□□□ -0.42
LINC01238-205ENST00000567549 FAM162BQ5T6X4 162 aa12.43□□□□□ -0.42
LINC01238-205ENST00000567549 LINC01551Q86U37 167 aa12.43□□□□□ -0.42
LINC01238-205ENST00000567549 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.43□□□□□ -0.42
LINC01238-205ENST00000567549 OCC1Q8TAD7 63 aa12.43□□□□□ -0.42
LINC01238-205ENST00000567549 SMIM12Q96EX1 92 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms