RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 OR1S2Q8NGQ3 325 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 OR5C1Q8NGR4 320 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 OR2K2Q8NGT1 345 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 OR2T35Q8NGX2 323 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 OR52E5Q8NH55 327 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 COQ8AQ8NI60 647 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 Q8TAT8 98 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 LRRC20Q8TCA0 184 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 RNASEH2CQ8TDP1 164 aaKnown RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 AP3S1Q92572 193 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 FXYD5Q96DB9 178 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 GNPNAT1Q96EK6 184 aaPredicted RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 TVP23CQ96ET8 276 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 SMIM8Q96KF7 97 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 FAM167A-AS1Q96KT0 104 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 HIST1H4GQ99525 98 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 TSC22D3Q99576 134 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 TRGV9Q99603 122 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 GINS3Q9BRX5 216 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 NIPSNAP3BQ9BS92 247 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 SHANK2-AS3Q9BTD1 123 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 SLC25A2Q9BXI2 301 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 SAMD10Q9BYL1 202 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 C20orf85Q9H1P6 137 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 ARV1Q9H2C2 271 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 SAV1Q9H4B6 383 aaPredicted RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 C11orf1Q9H5F2 150 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 NPVFQ9HCQ7 196 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 RPRMQ9NS64 109 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 NUDT15Q9NV35 164 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 MRPL16Q9NX20 251 aaKnown RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 RSL24D1Q9UHA3 163 aaKnown RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 NAGKQ9UJ70 344 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 RPH3ALQ9UNE2 315 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 HIGD1AQ9Y241 93 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 STRAPQ9Y3F4 350 aaKnown RBP0.68□□□□□ -2.3
SMG1-212ENST00000566328 HLA-DRB4X5D2U9 266 aa0.68□□□□□ -2.3
SMG1-212ENST00000566328 FAT4Q6V0I7 4981 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 TRBV19A0A075B6N1 114 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 TRGV2A0A075B6R0 118 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 TMSB15BA0A087X1C1 80 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 TRGV1A0A0A0MS02 117 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 TRAV10A0A0B4J240 114 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 NBDYA0A0U1RRE5 68 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 UBE2L5PA0A1B0GUS4 154 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 GRIFINA4D1Z8 144 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 PGPA6NDG6 321 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 NUPR2A6NF83 97 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 F6UZH7 168 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 INMT-MINDY4F8WBC2 141 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 H3BRN7 92 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 L7N2F9 121 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 CORTO00230 105 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 ISLRO14498 428 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 COX7A2P2O60397 106 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 ATG12O94817 140 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 IGHV3-30P01768 117 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 IGHV3-33P01772 117 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 GPX1P07203 203 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 NBEAP1P0C6P0 100 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 IGLC2P0DOY2 106 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 IGHV3-30-3P0DP02 117 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 IGHV3-30-5P0DP03 117 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 GZMBP10144 247 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 SLC25A6P12236 298 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 ANXA3P12429 323 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 MIFP14174 115 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 RPL12P30050 165 aaKnown RBP0.67□□□□□ -2.3
SMG1-212ENST00000566328 S100A5P33763 92 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 GALR1P47211 349 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 CAMLGP49069 296 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 PSMB3P49720 205 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 CRIP1P50238 77 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 FGF8P55075 233 aaPredicted RBP0.67□□□□□ -2.3
SMG1-212ENST00000566328 FOXA3P55318 350 aaPredicted RBP0.67□□□□□ -2.3
SMG1-212ENST00000566328 CMC4P56277 68 aaPredicted RBP0.67□□□□□ -2.3
SMG1-212ENST00000566328 UBE2G2P60604 165 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 RAB2AP61019 212 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 B2MP61769 119 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 NUTF2P61970 127 aaKnown RBP0.67□□□□□ -2.3
SMG1-212ENST00000566328 SNRPD3P62318 126 aaKnown RBP0.67□□□□□ -2.3
SMG1-212ENST00000566328 CCL20P78556 96 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 SSBP1Q04837 148 aaKnown RBP0.67□□□□□ -2.3
SMG1-212ENST00000566328 BAXQ07812 192 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 WFDC2Q14508 124 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 ZNF266Q14584 549 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 ZNF846Q147U1 533 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 SURF2Q15527 256 aaPredicted RBP0.67□□□□□ -2.3
SMG1-212ENST00000566328 RRN3P1Q2M238 152 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 SPANXN2Q5MJ10 180 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 C1orf194Q5T5A4 169 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 TRIQKQ629K1 86 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 ETFRF1Q6IPR1 90 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 MORN3Q6PF18 240 aaPredicted RBP0.67□□□□□ -2.3
SMG1-212ENST00000566328 LCN15Q6UWW0 184 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 PRNTQ86SH4 94 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 WFDC10BQ8IUB3 73 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 UBE2DNLQ8IWF7 75 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 ZFAND2AQ8N6M9 145 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 C11orf72Q8NBR9 251 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms