RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 SMIM12Q96EX1 92 aa3.72□□□□□ -1.81
HERPUD1-207ENST00000563781 SMIM7Q9BQ49 75 aa3.72□□□□□ -1.81
HERPUD1-207ENST00000563781 PYGO2Q9BRQ0 406 aa3.72□□□□□ -1.81
HERPUD1-207ENST00000563781 LINC00467Q9BRT7 94 aa3.72□□□□□ -1.81
HERPUD1-207ENST00000563781 NIPSNAP3BQ9BS92 247 aa3.72□□□□□ -1.81
HERPUD1-207ENST00000563781 BIRC6Q9NR09 4857 aa3.72□□□□□ -1.81
HERPUD1-207ENST00000563781 IGHV1OR15-1A0A075B7D0 117 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 IGKV3D-20A0A0C4DH25 116 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 TMEM218A2RU14 115 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 FABP5P3A8MUU1 101 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 ZNF727A8MUV8 499 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 SFTA3P0C7M3 94 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 ADCYAP1P18509 176 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 RAB4BP61018 213 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 OR5I1Q13606 314 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 RRN3P1Q2M238 152 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 TDRG1Q3Y452 100 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 FAM74A3Q4VXF1 159 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 SOHLH1Q5JUK2 328 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 MUC21Q5SSG8 566 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 C10orf25Q5T742 122 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 UQCC3Q6UW78 93 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 LINC01551Q86U37 167 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 C11orf72Q8NBR9 251 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 LINC01587Q99440 93 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 TMEM208Q9BTX3 173 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 C11orf68Q9H3H3 251 aaKnown RBP3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 TP53TG3Q9ULZ0 132 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 LY96Q9Y6Y9 160 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 URGCP-MRPS24S4R325 110 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 CSMD3Q7Z407 3707 aa3.71□□□□□ -1.82
HERPUD1-207ENST00000563781 IGHV3-16A0A0C4DH30 117 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 SMIM9A6NGZ8 99 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 KRBOX1C9JBD0 128 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 M0R036 132 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 DEFB4AO15263 64 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 GNRH2O43555 120 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 TYMSP04818 313 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 MGST1P10620 155 aaKnown RBP3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 MIFP14174 115 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 RPL23P62829 140 aaKnown RBP3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 RPL24P83731 157 aaKnown RBP3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 RPL19P84098 196 aaKnown RBP3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 GAGE5Q13069 117 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 GAGE6Q13070 117 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 MRPL23Q16540 153 aaKnown RBP3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 NDUFA5Q16718 116 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 C5orf47Q569G3 176 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 FAM162BQ5T6X4 162 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 TMEM263Q8WUH6 116 aaKnown RBP3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 ISOC2Q96AB3 205 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 EDA2RQ9HAV5 297 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 CELA1Q9UNI1 258 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 CSDC2Q9Y534 153 aaKnown RBP3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 RYR2Q92736 4967 aa3.7□□□□□ -1.82
HERPUD1-207ENST00000563781 TMSB15BA0A087X1C1 80 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 IGLV5-52A0A0A0MRZ9 124 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 A0A0J9YWU9 116 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 GRIFINA4D1Z8 144 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 B4DEV8 164 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 SIVA1O15304 175 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 RS1O15537 224 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 SNAI2O43623 268 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 SNAPINO95295 136 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 ORM1P02763 201 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 CXCL1P09341 107 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 RNASE3P12724 160 aaKnown RBP3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 HTN1P15515 57 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 TCL1AP56279 114 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 ADIRFQ15847 76 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 TMEM241Q24JQ0 296 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 DNLZQ5SXM8 178 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 C10orf91Q5T1B1 145 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 IBA57Q5T440 356 aaKnown RBP3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 ZNF493Q6ZR52 646 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 FAM231DQ6ZW35 169 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 PRSS3P2Q8NHM4 247 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 RPL36ALQ969Q0 106 aaKnown RBP3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 C16orf74Q96GX8 76 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 KCNS1Q96KK3 526 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 PACRGQ96M98 296 aaPredicted RBP3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 C9orf85Q96MD7 179 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 RNASE7Q9H1E1 156 aaKnown RBP3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 SDF2L1Q9HCN8 221 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 MDFICQ9P1T7 246 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 NAT8Q9UHE5 227 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 U3KQK5 164 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 ALMS1Q8TCU4 4167 aa3.69□□□□□ -1.82
HERPUD1-207ENST00000563781 EPPK1P58107 5090 aaKnown RBP3.68□□□□□ -1.82
HERPUD1-207ENST00000563781 TMEM189A5PLL7 270 aa3.68□□□□□ -1.82
HERPUD1-207ENST00000563781 TMEM238C9JI98 176 aa3.68□□□□□ -1.82
HERPUD1-207ENST00000563781 F8W036 122 aa3.68□□□□□ -1.82
HERPUD1-207ENST00000563781 SPINK4O60575 86 aa3.68□□□□□ -1.82
HERPUD1-207ENST00000563781 CDK2AP2O75956 126 aa3.68□□□□□ -1.82
HERPUD1-207ENST00000563781 P01737 135 aa3.68□□□□□ -1.82
HERPUD1-207ENST00000563781 IGLC6P0CF74 106 aa3.68□□□□□ -1.82
HERPUD1-207ENST00000563781 GZMBP10144 247 aa3.68□□□□□ -1.82
HERPUD1-207ENST00000563781 ASIPP42127 132 aa3.68□□□□□ -1.82
HERPUD1-207ENST00000563781 EMP1P54849 157 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms