RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 HIGD1AQ9Y241 93 aa3.07□□□□□ -1.92
LINC00254-201ENST00000563416 TRAV8-2A0A0B4J237 113 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 A8MTW9 85 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 H3BMM0 161 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 C3orf84H3BNL1 204 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 OR5G3P0C626 314 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 HLA-DRB4P13762 266 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 RPL7P18124 248 aaKnown RBP3.06□□□□□ -1.92
LINC00254-201ENST00000563416 CXCL2P19875 107 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 FGF7P21781 194 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 SNRPD3P62318 126 aaKnown RBP3.06□□□□□ -1.92
LINC00254-201ENST00000563416 CTAG1AP78358 180 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 RBMY1FQ15415 496 aaKnown RBP3.06□□□□□ -1.92
LINC00254-201ENST00000563416 DEFB135Q30KP9 77 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 PSMG4Q5JS54 123 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 MIC13Q5XKP0 118 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 MORN3Q6PF18 240 aaPredicted RBP3.06□□□□□ -1.92
LINC00254-201ENST00000563416 LINC00305Q7Z4B0 112 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 S100A7AQ86SG5 101 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 DNAH10Q8IVF4 4471 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 MUC7Q8TAX7 377 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 ASB13Q8WXK3 278 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 PPP1R14BQ96C90 147 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 KCNS1Q96KK3 526 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 PFDN5Q99471 154 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 TMEM243Q9BU79 118 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 NPCDR1Q9BY65 106 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 PARD6GQ9BYG4 376 aaPredicted RBP3.06□□□□□ -1.92
LINC00254-201ENST00000563416 SAMD10Q9BYL1 202 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 WDR61Q9GZS3 305 aaKnown RBP3.06□□□□□ -1.92
LINC00254-201ENST00000563416 ARL6Q9H0F7 186 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 SPANXB1Q9NS25 103 aaPredicted RBP3.06□□□□□ -1.92
LINC00254-201ENST00000563416 SLC39A9Q9NUM3 307 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 DOK5Q9P104 306 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 HSPB11Q9Y547 144 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 PXMP4Q9Y6I8 212 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 HLA-DRB4X5D2U9 266 aa3.06□□□□□ -1.92
LINC00254-201ENST00000563416 NACAE9PAV3 2078 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 DNAH2Q9P225 4427 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 IGLV1-50A0A075B6I6 118 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 KNCNA6PVL3 124 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 G3V3Q6 166 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 COX7A2P2O60397 106 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 IGLC2P0DOY2 106 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 RPL12P30050 165 aaKnown RBP3.05□□□□□ -1.92
LINC00254-201ENST00000563416 B2MP61769 119 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 C6orf99Q4VX62 202 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 GDF5OSQ5U4N7 250 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 C10orf113Q5VZT2 155 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 SPATA31B1PQ5VZV4 182 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 CEMP1Q6PRD7 247 aaPredicted RBP3.05□□□□□ -1.92
LINC00254-201ENST00000563416 LCN15Q6UWW0 184 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 FOXI2Q6ZQN5 318 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 BPIFA4PQ86YQ2 179 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 MRAP2Q96G30 205 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 AQP10Q96PS8 301 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 SLC50A1Q9BRV3 221 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 MED28Q9H204 178 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 C11orf68Q9H3H3 251 aaKnown RBP3.05□□□□□ -1.92
LINC00254-201ENST00000563416 RPP21Q9H633 154 aaKnown RBP3.05□□□□□ -1.92
LINC00254-201ENST00000563416 KCNIP2Q9NS61 270 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 RPRMQ9NS64 109 aa3.05□□□□□ -1.92
LINC00254-201ENST00000563416 A0A0J9YX75 114 aa3.04□□□□□ -1.92
LINC00254-201ENST00000563416 ZNF705GA8MUZ8 300 aaPredicted RBP3.04□□□□□ -1.92
LINC00254-201ENST00000563416 SLC17A3O00476 420 aa3.04□□□□□ -1.92
LINC00254-201ENST00000563416 NDUFS5O43920 106 aa3.04□□□□□ -1.92
LINC00254-201ENST00000563416 DEFB1P60022 68 aa3.04□□□□□ -1.92
LINC00254-201ENST00000563416 GUK1Q16774 197 aa3.04□□□□□ -1.92
LINC00254-201ENST00000563416 AMTNQ6UX39 209 aa3.04□□□□□ -1.92
LINC00254-201ENST00000563416 ZNF709Q8N972 641 aa3.04□□□□□ -1.92
LINC00254-201ENST00000563416 Q8NAQ8 132 aa3.04□□□□□ -1.92
LINC00254-201ENST00000563416 OR11H2Q8NH07 326 aa3.04□□□□□ -1.92
LINC00254-201ENST00000563416 FAM167A-AS1Q96KT0 104 aa3.04□□□□□ -1.92
LINC00254-201ENST00000563416 MRPL32Q9BYC8 188 aaKnown RBP3.04□□□□□ -1.92
LINC00254-201ENST00000563416 WFDC1Q9HC57 220 aa3.04□□□□□ -1.92
LINC00254-201ENST00000563416 ZNF331Q9NQX6 463 aaPredicted RBP3.04□□□□□ -1.92
LINC00254-201ENST00000563416 TMEM14CQ9P0S9 112 aa3.04□□□□□ -1.92
LINC00254-201ENST00000563416 KLK12Q9UKR0 248 aa3.04□□□□□ -1.92
LINC00254-201ENST00000563416 MUC4Q99102 2169 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 IGHV6-1A0A0B4J1U7 121 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 TRAV5A0A0B4J249 113 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 ZNF705FA8MVS1 300 aaPredicted RBP3.03□□□□□ -1.92
LINC00254-201ENST00000563416 KRBOX1C9JBD0 128 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 C17orf112F2Z3M2 114 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 H3BQ15 152 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 ZNF705DP0CH99 300 aaPredicted RBP3.03□□□□□ -1.92
LINC00254-201ENST00000563416 ZNF705BP0CI00 300 aaPredicted RBP3.03□□□□□ -1.92
LINC00254-201ENST00000563416 HIST1H1EP10412 219 aaKnown RBP3.03□□□□□ -1.92
LINC00254-201ENST00000563416 MIFP14174 115 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 HLA-DMBP28068 263 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 PDE6HQ13956 83 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 PMVKQ15126 192 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 Q5BKY6 102 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 FAM78BQ5VT40 261 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 EBLN2Q6P2I7 272 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 ZNF705AQ6ZN79 300 aaPredicted RBP3.03□□□□□ -1.92
LINC00254-201ENST00000563416 MIR17HGQ75NE6 70 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 PCP2Q8IVA1 136 aa3.03□□□□□ -1.92
LINC00254-201ENST00000563416 RNF182Q8N6D2 247 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms