RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 ZFP30Q9Y2G7 519 aa10.39□□□□□ -0.75
CLK3-211ENST00000563297 RHODO00212 210 aa10.38□□□□□ -0.75
CLK3-211ENST00000563297 SH2D1AO60880 128 aa10.38□□□□□ -0.75
CLK3-211ENST00000563297 BAALCQ8WXS3 180 aa10.38□□□□□ -0.75
CLK3-211ENST00000563297 SFRP2Q96HF1 295 aa10.38□□□□□ -0.75
CLK3-211ENST00000563297 hCG_2014768A0A024R1R8 64 aa10.37□□□□□ -0.75
CLK3-211ENST00000563297 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.37□□□□□ -0.75
CLK3-211ENST00000563297 AKR1C8PQ5T2L2 129 aa10.37□□□□□ -0.75
CLK3-211ENST00000563297 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
CLK3-211ENST00000563297 NIT1Q86X76 327 aa10.37□□□□□ -0.75
CLK3-211ENST00000563297 OR11H4Q8NGC9 324 aa10.37□□□□□ -0.75
CLK3-211ENST00000563297 DNAJC30Q96LL9 226 aa10.37□□□□□ -0.75
CLK3-211ENST00000563297 COX11Q9Y6N1 276 aa10.37□□□□□ -0.75
CLK3-211ENST00000563297 A0A087WWL8 130 aa10.36□□□□□ -0.75
CLK3-211ENST00000563297 ZNF674Q2M3X9 581 aa10.36□□□□□ -0.75
CLK3-211ENST00000563297 FAM162BQ5T6X4 162 aa10.36□□□□□ -0.75
CLK3-211ENST00000563297 FMC1Q96HJ9 113 aa10.36□□□□□ -0.75
CLK3-211ENST00000563297 PHLDA3Q9Y5J5 127 aa10.36□□□□□ -0.75
CLK3-211ENST00000563297 MAP1LC3B2A6NCE7 125 aa10.35□□□□□ -0.75
CLK3-211ENST00000563297 G3V3Q6 166 aa10.35□□□□□ -0.75
CLK3-211ENST00000563297 TPT1P13693 172 aaKnown RBP10.35□□□□□ -0.75
CLK3-211ENST00000563297 LINC01620Q4KN68 170 aa10.35□□□□□ -0.75
CLK3-211ENST00000563297 MAP1LC3BQ9GZQ8 125 aa10.35□□□□□ -0.75
CLK3-211ENST00000563297 CYTL1Q9NRR1 136 aa10.35□□□□□ -0.75
CLK3-211ENST00000563297 KLK12Q9UKR0 248 aa10.35□□□□□ -0.75
CLK3-211ENST00000563297 URGCP-MRPS24S4R325 110 aa10.35□□□□□ -0.75
CLK3-211ENST00000563297 TMSB15BA0A087X1C1 80 aa10.34□□□□□ -0.75
CLK3-211ENST00000563297 TRBV6-1A0A0K0K1D8 114 aa10.34□□□□□ -0.75
CLK3-211ENST00000563297 A0A1B0GVG6 124 aa10.34□□□□□ -0.75
CLK3-211ENST00000563297 M0R381 172 aa10.34□□□□□ -0.75
CLK3-211ENST00000563297 FHITP49789 147 aa10.34□□□□□ -0.75
CLK3-211ENST00000563297 UBE2G1P62253 170 aa10.34□□□□□ -0.75
CLK3-211ENST00000563297 LINC01559Q495D7 138 aa10.34□□□□□ -0.75
CLK3-211ENST00000563297 RMI2Q96E14 147 aa10.34□□□□□ -0.75
CLK3-211ENST00000563297 IGKV2D-24A0A075B6R9 120 aa10.33□□□□□ -0.76
CLK3-211ENST00000563297 LTAP01374 205 aa10.33□□□□□ -0.76
CLK3-211ENST00000563297 PLA2G1BP04054 148 aaKnown RBP10.33□□□□□ -0.76
CLK3-211ENST00000563297 SEC11BP0C7V7 166 aa10.33□□□□□ -0.76
CLK3-211ENST00000563297 CST9LP1Q5W188 147 aa10.33□□□□□ -0.76
CLK3-211ENST00000563297 Q8N976 141 aa10.33□□□□□ -0.76
CLK3-211ENST00000563297 TRBV10-1A0A0K0K1A3 114 aa10.32□□□□□ -0.76
CLK3-211ENST00000563297 RBFOX3A6NFN3 312 aa10.32□□□□□ -0.76
CLK3-211ENST00000563297 UBE2D3P61077 147 aa10.32□□□□□ -0.76
CLK3-211ENST00000563297 UBE2D2P62837 147 aa10.32□□□□□ -0.76
CLK3-211ENST00000563297 RPL36AP83881 106 aaKnown RBP10.32□□□□□ -0.76
CLK3-211ENST00000563297 ZFP82Q8N141 532 aa10.32□□□□□ -0.76
CLK3-211ENST00000563297 LINC00528Q8N1L1 170 aa10.32□□□□□ -0.76
CLK3-211ENST00000563297 RPL36ALQ969Q0 106 aaKnown RBP10.32□□□□□ -0.76
CLK3-211ENST00000563297 UBE2WQ96B02 151 aa10.32□□□□□ -0.76
CLK3-211ENST00000563297 TRBV7-3A0A075B6L6 115 aa10.31□□□□□ -0.76
CLK3-211ENST00000563297 A0A087WX48 190 aa10.31□□□□□ -0.76
CLK3-211ENST00000563297 J3QL48 77 aa10.31□□□□□ -0.76
CLK3-211ENST00000563297 ELOBQ15370 118 aa10.31□□□□□ -0.76
CLK3-211ENST00000563297 ATRAIDQ6UW56 229 aa10.31□□□□□ -0.76
CLK3-211ENST00000563297 STOML3Q8TAV4 291 aa10.31□□□□□ -0.76
CLK3-211ENST00000563297 TCEAL7Q9BRU2 100 aa10.31□□□□□ -0.76
CLK3-211ENST00000563297 CHCHD7Q9BUK0 85 aa10.31□□□□□ -0.76
CLK3-211ENST00000563297 ARPC5O15511 151 aa10.3□□□□□ -0.76
CLK3-211ENST00000563297 PAGE4O60829 102 aa10.3□□□□□ -0.76
CLK3-211ENST00000563297 SCXQ7RTU7 201 aa10.3□□□□□ -0.76
CLK3-211ENST00000563297 AKR1C3P42330 323 aa10.29□□□□□ -0.76
CLK3-211ENST00000563297 RAB4BP61018 213 aa10.29□□□□□ -0.76
CLK3-211ENST00000563297 OR10G8Q8NGN5 311 aa10.29□□□□□ -0.76
CLK3-211ENST00000563297 KRTAP29-1A8MX34 341 aaPredicted RBP10.28□□□□□ -0.76
CLK3-211ENST00000563297 TMEM262E9PQX1 116 aa10.28□□□□□ -0.76
CLK3-211ENST00000563297 PFDN1O60925 122 aa10.28□□□□□ -0.76
CLK3-211ENST00000563297 RPL19P84098 196 aaKnown RBP10.28□□□□□ -0.76
CLK3-211ENST00000563297 Q0VG73 95 aa10.28□□□□□ -0.76
CLK3-211ENST00000563297 DEFB104AQ8WTQ1 72 aa10.28□□□□□ -0.76
CLK3-211ENST00000563297 CHAC1Q9BUX1 264 aa10.28□□□□□ -0.76
CLK3-211ENST00000563297 MLST8Q9BVC4 326 aa10.28□□□□□ -0.76
CLK3-211ENST00000563297 TRBV6-8A0A0A6YYG3 113 aa10.27□□□□□ -0.77
CLK3-211ENST00000563297 S100A9P06702 114 aaKnown RBP10.27□□□□□ -0.77
CLK3-211ENST00000563297 PRR27Q6MZM9 219 aa10.27□□□□□ -0.77
CLK3-211ENST00000563297 KCNIP4Q6PIL6 250 aa10.27□□□□□ -0.77
CLK3-211ENST00000563297 ENHOQ6UWT2 76 aa10.27□□□□□ -0.77
CLK3-211ENST00000563297 NEXN-AS1Q8NBZ9 246 aa10.27□□□□□ -0.77
CLK3-211ENST00000563297 OR10AG1Q8NH19 301 aa10.27□□□□□ -0.77
CLK3-211ENST00000563297 MBD3L1Q8WWY6 194 aa10.27□□□□□ -0.77
CLK3-211ENST00000563297 SSBP4Q9BWG4 385 aaPredicted RBP10.27□□□□□ -0.77
CLK3-211ENST00000563297 SMLR1H3BR10 107 aa10.26□□□□□ -0.77
CLK3-211ENST00000563297 CXCL1P09341 107 aa10.26□□□□□ -0.77
CLK3-211ENST00000563297 SFT2D1Q8WV19 159 aa10.26□□□□□ -0.77
CLK3-211ENST00000563297 ZNF471Q9BX82 626 aaPredicted RBP10.26□□□□□ -0.77
CLK3-211ENST00000563297 SCO2A0A1W2PP80 73 aa10.25□□□□□ -0.77
CLK3-211ENST00000563297 SNAI2O43623 268 aa10.25□□□□□ -0.77
CLK3-211ENST00000563297 KRTAP10-4P60372 401 aaPredicted RBP10.25□□□□□ -0.77
CLK3-211ENST00000563297 ZNF56Q15929 161 aa10.25□□□□□ -0.77
CLK3-211ENST00000563297 BAGE2Q86Y30 109 aa10.25□□□□□ -0.77
CLK3-211ENST00000563297 KCNRGQ8N5I3 272 aa10.25□□□□□ -0.77
CLK3-211ENST00000563297 CIRBP-AS1Q8TBR5 109 aa10.25□□□□□ -0.77
CLK3-211ENST00000563297 MUC21A0A0G2JKD1 596 aa10.24□□□□□ -0.77
CLK3-211ENST00000563297 MUC21A0A140T8X8 626 aa10.24□□□□□ -0.77
CLK3-211ENST00000563297 A0A1B0GV50 99 aa10.24□□□□□ -0.77
CLK3-211ENST00000563297 MPV17L2Q567V2 206 aa10.24□□□□□ -0.77
CLK3-211ENST00000563297 C15orf54Q8N8G6 183 aa10.24□□□□□ -0.77
CLK3-211ENST00000563297 FAM213BQ8TBF2 198 aa10.24□□□□□ -0.77
CLK3-211ENST00000563297 C1orf43Q9BWL3 253 aa10.24□□□□□ -0.77
CLK3-211ENST00000563297 UMAD1C9J7I0 102 aa10.23□□□□□ -0.77
CLK3-211ENST00000563297 OR5AL1P0C617 328 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms