RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 TDRG1Q3Y452 100 aa9.45□□□□□ -0.9
SPG7-207ENST00000563218 GNB1LQ9BYB4 327 aa9.45□□□□□ -0.9
SPG7-207ENST00000563218 A0A1B0GXF2 115 aa9.44□□□□□ -0.9
SPG7-207ENST00000563218 SNURFLB1AK76 121 aa9.44□□□□□ -0.9
SPG7-207ENST00000563218 H3BVH4 76 aa9.44□□□□□ -0.9
SPG7-207ENST00000563218 GNRH2O43555 120 aa9.44□□□□□ -0.9
SPG7-207ENST00000563218 MT-ND6P03923 174 aa9.44□□□□□ -0.9
SPG7-207ENST00000563218 CAMPP49913 170 aa9.44□□□□□ -0.9
SPG7-207ENST00000563218 DNLZQ5SXM8 178 aa9.44□□□□□ -0.9
SPG7-207ENST00000563218 UBE2DNLQ8IWF7 75 aa9.44□□□□□ -0.9
SPG7-207ENST00000563218 FRZBQ92765 325 aa9.44□□□□□ -0.9
SPG7-207ENST00000563218 C1QTNF4Q9BXJ3 329 aa9.44□□□□□ -0.9
SPG7-207ENST00000563218 TIMM8BQ9Y5J9 83 aaPredicted RBP9.44□□□□□ -0.9
SPG7-207ENST00000563218 TRAPPC1Q9Y5R8 145 aa9.44□□□□□ -0.9
SPG7-207ENST00000563218 TRGV11A0A075B6L2 103 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 SNAI2O43623 268 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 HLA-DQA1P01909 254 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 TRGC2P03986 189 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 OR5AL1P0C617 328 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 HTN3P15516 51 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 RAB5BP61020 215 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 CACNG7P62955 275 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 FAM222AQ5U5X8 452 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 TMEM136Q6ZRR5 245 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 TMEM256Q8N2U0 113 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 LINC01587Q99440 93 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 TMEM208Q9BTX3 173 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 SSBP4Q9BWG4 385 aaPredicted RBP9.43□□□□□ -0.9
SPG7-207ENST00000563218 DKK2Q9UBU2 259 aa9.43□□□□□ -0.9
SPG7-207ENST00000563218 MUC21A0A0G2JKD1 596 aa9.42□□□□□ -0.9
SPG7-207ENST00000563218 MUC21A0A140T8X8 626 aa9.42□□□□□ -0.9
SPG7-207ENST00000563218 CBY3A6NI87 242 aa9.42□□□□□ -0.9
SPG7-207ENST00000563218 SPART-AS1P0CW21 52 aa9.42□□□□□ -0.9
SPG7-207ENST00000563218 SSTP61278 116 aa9.42□□□□□ -0.9
SPG7-207ENST00000563218 FABP9Q0Z7S8 132 aa9.42□□□□□ -0.9
SPG7-207ENST00000563218 TWIST1Q15672 202 aa9.42□□□□□ -0.9
SPG7-207ENST00000563218 LINC00467Q9BRT7 94 aa9.42□□□□□ -0.9
SPG7-207ENST00000563218 MRPL18Q9H0U6 180 aaKnown RBP9.42□□□□□ -0.9
SPG7-207ENST00000563218 GOLT1BQ9Y3E0 138 aa9.42□□□□□ -0.9
SPG7-207ENST00000563218 IGHV3-16A0A0C4DH30 117 aa9.41□□□□□ -0.9
SPG7-207ENST00000563218 HTN1P15515 57 aa9.41□□□□□ -0.9
SPG7-207ENST00000563218 NTF3P20783 257 aa9.41□□□□□ -0.9
SPG7-207ENST00000563218 SPANXN1Q5VSR9 72 aa9.41□□□□□ -0.9
SPG7-207ENST00000563218 C1orf158Q8N1D5 194 aa9.41□□□□□ -0.9
SPG7-207ENST00000563218 CNFNQ9BYD5 112 aa9.41□□□□□ -0.9
SPG7-207ENST00000563218 TP53TG3Q9ULZ0 132 aa9.41□□□□□ -0.9
SPG7-207ENST00000563218 PHLDA3Q9Y5J5 127 aa9.41□□□□□ -0.9
SPG7-207ENST00000563218 APCSP02743 223 aa9.4□□□□□ -0.9
SPG7-207ENST00000563218 PRM2P04554 102 aa9.4□□□□□ -0.9
SPG7-207ENST00000563218 RNASE3P12724 160 aaKnown RBP9.4□□□□□ -0.9
SPG7-207ENST00000563218 GATD1Q8NB37 220 aa9.4□□□□□ -0.9
SPG7-207ENST00000563218 OR10AG1Q8NH19 301 aa9.4□□□□□ -0.9
SPG7-207ENST00000563218 SCRT2Q9NQ03 307 aa9.4□□□□□ -0.9
SPG7-207ENST00000563218 ZNF415Q09FC8 603 aa9.39□□□□□ -0.91
SPG7-207ENST00000563218 SMIM15Q7Z3B0 74 aa9.39□□□□□ -0.91
SPG7-207ENST00000563218 ZFP82Q8N141 532 aa9.39□□□□□ -0.91
SPG7-207ENST00000563218 MDFICQ9P1T7 246 aa9.39□□□□□ -0.91
SPG7-207ENST00000563218 SMIM9A6NGZ8 99 aa9.38□□□□□ -0.91
SPG7-207ENST00000563218 M0R381 172 aa9.38□□□□□ -0.91
SPG7-207ENST00000563218 TNP2Q05952 138 aa9.38□□□□□ -0.91
SPG7-207ENST00000563218 ZNF493Q6ZR52 646 aa9.38□□□□□ -0.91
SPG7-207ENST00000563218 SYT8Q8NBV8 401 aa9.38□□□□□ -0.91
SPG7-207ENST00000563218 C9orf85Q96MD7 179 aa9.38□□□□□ -0.91
SPG7-207ENST00000563218 MSRB1Q9NZV6 116 aa9.38□□□□□ -0.91
SPG7-207ENST00000563218 PHOX2AO14813 284 aa9.37□□□□□ -0.91
SPG7-207ENST00000563218 TRGC1P0CF51 173 aa9.37□□□□□ -0.91
SPG7-207ENST00000563218 SLAQ13239 276 aa9.37□□□□□ -0.91
SPG7-207ENST00000563218 C1orf134Q5TEV5 83 aa9.37□□□□□ -0.91
SPG7-207ENST00000563218 TMEM191AQ9H0A3 160 aa9.37□□□□□ -0.91
SPG7-207ENST00000563218 NXPH4O95158 308 aa9.36□□□□□ -0.91
SPG7-207ENST00000563218 HIST1H2BKO60814 126 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 HIST1H2BJP06899 126 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 HIST1H2BOP23527 126 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 HIST1H2BBP33778 126 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 HIST1H2BDP58876 126 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 DAD1P61803 113 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 HIST1H2BCP62807 126 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 HIST2H2BEQ16778 126 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 KIAA1644Q3SXP7 199 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.35□□□□□ -0.91
SPG7-207ENST00000563218 DMRTA1Q5VZB9 504 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 FAM104BQ5XKR9 115 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 HIST1H2BHQ93079 126 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 AP1S3Q96PC3 154 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 HIST1H2BNQ99877 126 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 HIST1H2BMQ99879 126 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 SPXQ9BT56 116 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 GSN-AS1Q9NRJ2 163 aa9.35□□□□□ -0.91
SPG7-207ENST00000563218 TEX48A0A1B0GUV7 120 aa9.34□□□□□ -0.91
SPG7-207ENST00000563218 S100A6P06703 90 aa9.34□□□□□ -0.91
SPG7-207ENST00000563218 AZU1P20160 251 aa9.34□□□□□ -0.91
SPG7-207ENST00000563218 RRN3P1Q2M238 152 aa9.34□□□□□ -0.91
SPG7-207ENST00000563218 AMN1Q8IY45 258 aa9.34□□□□□ -0.91
SPG7-207ENST00000563218 C11orf72Q8NBR9 251 aa9.34□□□□□ -0.91
SPG7-207ENST00000563218 TMEM263Q8WUH6 116 aaKnown RBP9.34□□□□□ -0.91
SPG7-207ENST00000563218 C16orf90A8MZG2 172 aa9.33□□□□□ -0.92
SPG7-207ENST00000563218 M0R2P5 195 aa9.33□□□□□ -0.92
SPG7-207ENST00000563218 SMIM17P0DL12 118 aa9.33□□□□□ -0.92
SPG7-207ENST00000563218 EVI2AP22794 236 aa9.33□□□□□ -0.92
SPG7-207ENST00000563218 ZNF876PQ49A33 203 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms