RNA–Protein interactions for RNA: ENST00000563053.1

HIRIP3-202, Transcript of HIRA interacting protein 3, humanhuman

TSL 2

Gene HIRIP3, Length 1,686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIRIP3-202ENST00000563053 RNASE8Q8TDE3 154 aaKnown RBP11.46□□□□□ -0.58
HIRIP3-202ENST00000563053 IGHV4-28A0A0C4DH34 117 aa11.45□□□□□ -0.58
HIRIP3-202ENST00000563053 IGLC6P0CF74 106 aa11.45□□□□□ -0.58
HIRIP3-202ENST00000563053 KIAA1644Q3SXP7 199 aa11.45□□□□□ -0.58
HIRIP3-202ENST00000563053 C11orf72Q8NBR9 251 aa11.45□□□□□ -0.58
HIRIP3-202ENST00000563053 OR10AG1Q8NH19 301 aa11.45□□□□□ -0.58
HIRIP3-202ENST00000563053 LINC00467Q9BRT7 94 aa11.45□□□□□ -0.58
HIRIP3-202ENST00000563053 ALKBH7Q9BT30 221 aaPredicted RBP11.45□□□□□ -0.58
HIRIP3-202ENST00000563053 MEGF8Q7Z7M0 2845 aa11.45□□□□□ -0.58
HIRIP3-202ENST00000563053 A0A1B0GW15 77 aa11.44□□□□□ -0.58
HIRIP3-202ENST00000563053 M0R381 172 aa11.44□□□□□ -0.58
HIRIP3-202ENST00000563053 FOXA3P55318 350 aaPredicted RBP11.44□□□□□ -0.58
HIRIP3-202ENST00000563053 ZNF415Q09FC8 603 aa11.44□□□□□ -0.58
HIRIP3-202ENST00000563053 TMEM263Q8WUH6 116 aaKnown RBP11.44□□□□□ -0.58
HIRIP3-202ENST00000563053 NOP10Q9NPE3 64 aaKnown RBP11.44□□□□□ -0.58
HIRIP3-202ENST00000563053 A0A1B0GV90 55 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 C20orf202A1L168 122 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 PLAC8L1A1L4L8 177 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 PMCHL1Q16048 86 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 NIT1Q86X76 327 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 Q8N976 141 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 BORCS7Q96B45 105 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 C16orf74Q96GX8 76 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 MRPL16Q9NX20 251 aaKnown RBP11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 PHLDA3Q9Y5J5 127 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 HSBP1O75506 76 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 PMCHP20382 165 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 KRTDAPP60985 99 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 GATD1Q8NB37 220 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 CHCHD1Q96BP2 118 aaKnown RBP11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 C9orf85Q96MD7 179 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 SNHG12Q9BXW3 62 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 MSRB1Q9NZV6 116 aa11.43□□□□□ -0.58
HIRIP3-202ENST00000563053 EREGO14944 169 aa11.42□□□□□ -0.58
HIRIP3-202ENST00000563053 SPANXN1Q5VSR9 72 aa11.42□□□□□ -0.58
HIRIP3-202ENST00000563053 Q8NAQ8 132 aa11.42□□□□□ -0.58
HIRIP3-202ENST00000563053 SPATA25Q9BR10 227 aa11.42□□□□□ -0.58
HIRIP3-202ENST00000563053 TM2D3Q9BRN9 247 aa11.42□□□□□ -0.58
HIRIP3-202ENST00000563053 SNAI2O43623 268 aa11.41□□□□□ -0.58
HIRIP3-202ENST00000563053 CTRLP40313 264 aa11.41□□□□□ -0.58
HIRIP3-202ENST00000563053 TP53TG1Q9Y2A0 90 aa11.41□□□□□ -0.58
HIRIP3-202ENST00000563053 HUWE1Q7Z6Z7 4374 aaKnown RBP11.41□□□□□ -0.58
HIRIP3-202ENST00000563053 SMIM9A6NGZ8 99 aa11.4□□□□□ -0.58
HIRIP3-202ENST00000563053 OR5AL1P0C617 328 aa11.4□□□□□ -0.58
HIRIP3-202ENST00000563053 C3orf79P0CE67 100 aa11.4□□□□□ -0.58
HIRIP3-202ENST00000563053 NTF3P20783 257 aa11.4□□□□□ -0.58
HIRIP3-202ENST00000563053 TWIST1Q15672 202 aa11.4□□□□□ -0.58
HIRIP3-202ENST00000563053 B9D2Q9BPU9 175 aa11.4□□□□□ -0.58
HIRIP3-202ENST00000563053 SSBP4Q9BWG4 385 aaPredicted RBP11.4□□□□□ -0.58
HIRIP3-202ENST00000563053 JPT2Q9H910 190 aa11.4□□□□□ -0.58
HIRIP3-202ENST00000563053 SCRT2Q9NQ03 307 aa11.4□□□□□ -0.58
HIRIP3-202ENST00000563053 DNAH9Q9NYC9 4486 aa11.4□□□□□ -0.58
HIRIP3-202ENST00000563053 TRGV1A0A0A0MS02 117 aa11.4□□□□□ -0.59
HIRIP3-202ENST00000563053 MIFP14174 115 aa11.4□□□□□ -0.59
HIRIP3-202ENST00000563053 CAMPP49913 170 aa11.4□□□□□ -0.59
HIRIP3-202ENST00000563053 ZNF876PQ49A33 203 aa11.4□□□□□ -0.59
HIRIP3-202ENST00000563053 ZNF493Q6ZR52 646 aa11.4□□□□□ -0.59
HIRIP3-202ENST00000563053 Q6ZTI0 123 aa11.4□□□□□ -0.59
HIRIP3-202ENST00000563053 MUC4Q99102 2169 aa11.39□□□□□ -0.59
HIRIP3-202ENST00000563053 IL17DQ8TAD2 202 aa11.39□□□□□ -0.59
HIRIP3-202ENST00000563053 ZMAT4Q9H898 229 aa11.39□□□□□ -0.59
HIRIP3-202ENST00000563053 UQCR10Q9UDW1 63 aa11.39□□□□□ -0.59
HIRIP3-202ENST00000563053 CELA1Q9UNI1 258 aa11.39□□□□□ -0.59
HIRIP3-202ENST00000563053 PAM16Q9Y3D7 125 aa11.39□□□□□ -0.59
HIRIP3-202ENST00000563053 A0A0J9YWU9 116 aa11.38□□□□□ -0.59
HIRIP3-202ENST00000563053 A0A1B0GUT8 65 aa11.38□□□□□ -0.59
HIRIP3-202ENST00000563053 GAGE12BA1L429 117 aa11.38□□□□□ -0.59
HIRIP3-202ENST00000563053 GAGE7O76087 117 aa11.38□□□□□ -0.59
HIRIP3-202ENST00000563053 GAGE12FP0CL80 117 aa11.38□□□□□ -0.59
HIRIP3-202ENST00000563053 GAGE12GP0CL81 117 aa11.38□□□□□ -0.59
HIRIP3-202ENST00000563053 GAGE12IP0CL82 117 aa11.38□□□□□ -0.59
HIRIP3-202ENST00000563053 FAM222AQ5U5X8 452 aa11.38□□□□□ -0.59
HIRIP3-202ENST00000563053 M0R2P5 195 aa11.37□□□□□ -0.59
HIRIP3-202ENST00000563053 DEFB130BP0DP73 79 aa11.37□□□□□ -0.59
HIRIP3-202ENST00000563053 DEFB130AP0DP74 79 aa11.37□□□□□ -0.59
HIRIP3-202ENST00000563053 MED14OSP0DP75 135 aa11.37□□□□□ -0.59
HIRIP3-202ENST00000563053 BTF3P20290 206 aaKnown RBP11.37□□□□□ -0.59
HIRIP3-202ENST00000563053 RIGQ13278 110 aa11.37□□□□□ -0.59
HIRIP3-202ENST00000563053 PRKDCP78527 4128 aaKnown RBP11.37□□□□□ -0.59
HIRIP3-202ENST00000563053 TENM3Q9P273 2699 aa11.37□□□□□ -0.59
HIRIP3-202ENST00000563053 IGHV3-53P01767 116 aa11.36□□□□□ -0.59
HIRIP3-202ENST00000563053 SPATA45Q537H7 98 aa11.36□□□□□ -0.59
HIRIP3-202ENST00000563053 SPXQ9BT56 116 aa11.36□□□□□ -0.59
HIRIP3-202ENST00000563053 A0A087WWL8 130 aa11.36□□□□□ -0.59
HIRIP3-202ENST00000563053 IGHV3-73A0A0B4J1V6 119 aa11.36□□□□□ -0.59
HIRIP3-202ENST00000563053 RNASEKQ6P5S7 137 aaKnown RBP11.36□□□□□ -0.59
HIRIP3-202ENST00000563053 SYT8Q8NBV8 401 aa11.36□□□□□ -0.59
HIRIP3-202ENST00000563053 TCAPO15273 167 aa11.35□□□□□ -0.59
HIRIP3-202ENST00000563053 EVI2AP22794 236 aa11.35□□□□□ -0.59
HIRIP3-202ENST00000563053 CACNG7P62955 275 aa11.35□□□□□ -0.59
HIRIP3-202ENST00000563053 DAZ2Q13117 558 aaKnown RBP11.35□□□□□ -0.59
HIRIP3-202ENST00000563053 FAM74A4Q5TZK3 123 aa11.35□□□□□ -0.59
HIRIP3-202ENST00000563053 FAM19A2Q8N3H0 131 aa11.35□□□□□ -0.59
HIRIP3-202ENST00000563053 C14orf178Q8N769 122 aaPredicted RBP11.35□□□□□ -0.59
HIRIP3-202ENST00000563053 IGLC3P0DOY3 106 aa11.34□□□□□ -0.59
HIRIP3-202ENST00000563053 DKK2Q9UBU2 259 aa11.34□□□□□ -0.59
HIRIP3-202ENST00000563053 TRGV2A0A075B6R0 118 aa11.33□□□□□ -0.6
HIRIP3-202ENST00000563053 TRAV9-2A0A087WT02 112 aa11.33□□□□□ -0.6
HIRIP3-202ENST00000563053 TMEM70Q9BUB7 260 aa11.33□□□□□ -0.6
HIRIP3-202ENST00000563053 CNFNQ9BYD5 112 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms