RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 C4orf26Q17RF5 130 aa8.8□□□□□ -1
HERC1-214ENST00000561400 HRCT1Q6UXD1 115 aa8.8□□□□□ -1
HERC1-214ENST00000561400 PATE2Q6UY27 113 aa8.8□□□□□ -1
HERC1-214ENST00000561400 IGHV3OR16-13A0A075B7E8 117 aa8.79□□□□□ -1
HERC1-214ENST00000561400 IGHV3-74A0A0B4J1X5 117 aa8.79□□□□□ -1
HERC1-214ENST00000561400 ZNF785A8K8V0 405 aa8.79□□□□□ -1
HERC1-214ENST00000561400 SNCGO76070 127 aa8.79□□□□□ -1
HERC1-214ENST00000561400 PSMB3P49720 205 aa8.79□□□□□ -1
HERC1-214ENST00000561400 NFE4Q86UQ8 179 aa8.79□□□□□ -1
HERC1-214ENST00000561400 IL36BQ9NZH7 164 aa8.79□□□□□ -1
HERC1-214ENST00000561400 PEMTQ9UBM1 199 aa8.79□□□□□ -1
HERC1-214ENST00000561400 FGF6P10767 208 aa8.78□□□□□ -1
HERC1-214ENST00000561400 TIMM9Q9Y5J7 89 aa8.78□□□□□ -1
HERC1-214ENST00000561400 NPPCP23582 126 aa8.78□□□□□ -1
HERC1-214ENST00000561400 NMUP48645 174 aa8.78□□□□□ -1
HERC1-214ENST00000561400 METTL26Q96S19 204 aa8.78□□□□□ -1
HERC1-214ENST00000561400 U3KQE9 123 aa8.78□□□□□ -1
HERC1-214ENST00000561400 IGHV3-66A0A0C4DH42 116 aa8.77□□□□□ -1.01
HERC1-214ENST00000561400 IGHV7-4-1A0A0J9YVY3 117 aa8.77□□□□□ -1.01
HERC1-214ENST00000561400 HERVK_113P63121 156 aa8.77□□□□□ -1.01
HERC1-214ENST00000561400 PPDPFLQ8WWR9 84 aa8.77□□□□□ -1.01
HERC1-214ENST00000561400 VSIRQ9H7M9 311 aa8.77□□□□□ -1.01
HERC1-214ENST00000561400 KCNIP2Q9NS61 270 aa8.77□□□□□ -1.01
HERC1-214ENST00000561400 GGTLC3B5MD39 225 aa8.77□□□□□ -1.01
HERC1-214ENST00000561400 ATP5LO75964 103 aa8.77□□□□□ -1.01
HERC1-214ENST00000561400 MORN5Q5VZ52 161 aa8.77□□□□□ -1.01
HERC1-214ENST00000561400 GATAD1Q8WUU5 269 aa8.77□□□□□ -1.01
HERC1-214ENST00000561400 PHLDA1Q8WV24 401 aaPredicted RBP8.77□□□□□ -1.01
HERC1-214ENST00000561400 RHPN1-AS1Q9BWJ2 59 aa8.77□□□□□ -1.01
HERC1-214ENST00000561400 CHEK1O14757 476 aa8.76□□□□□ -1.01
HERC1-214ENST00000561400 BUB3O43684 328 aa8.76□□□□□ -1.01
HERC1-214ENST00000561400 COX7A2P2O60397 106 aa8.76□□□□□ -1.01
HERC1-214ENST00000561400 CAMPP49913 170 aa8.76□□□□□ -1.01
HERC1-214ENST00000561400 Q5XG85 94 aa8.76□□□□□ -1.01
HERC1-214ENST00000561400 SLC25A39Q9BZJ4 359 aaPredicted RBP8.76□□□□□ -1.01
HERC1-214ENST00000561400 MGAM2Q2M2H8 2515 aa8.76□□□□□ -1.01
HERC1-214ENST00000561400 TRAV4A0A0B4J268 109 aa8.76□□□□□ -1.01
HERC1-214ENST00000561400 APCSP02743 223 aa8.76□□□□□ -1.01
HERC1-214ENST00000561400 ZNF688P0C7X2 276 aa8.76□□□□□ -1.01
HERC1-214ENST00000561400 SERF2P84101 59 aa8.76□□□□□ -1.01
HERC1-214ENST00000561400 C10orf113Q5VZT2 155 aa8.76□□□□□ -1.01
HERC1-214ENST00000561400 LINC00305Q7Z4B0 112 aa8.76□□□□□ -1.01
HERC1-214ENST00000561400 RNASE7Q9H1E1 156 aaKnown RBP8.76□□□□□ -1.01
HERC1-214ENST00000561400 SORL1Q92673 2214 aa8.75□□□□□ -1.01
HERC1-214ENST00000561400 H3BRN7 92 aa8.75□□□□□ -1.01
HERC1-214ENST00000561400 TRPT1Q86TN4 253 aaKnown RBP8.75□□□□□ -1.01
HERC1-214ENST00000561400 SHANK2-AS3Q9BTD1 123 aa8.75□□□□□ -1.01
HERC1-214ENST00000561400 PKIGQ9Y2B9 76 aa8.75□□□□□ -1.01
HERC1-214ENST00000561400 ASIPP42127 132 aa8.74□□□□□ -1.01
HERC1-214ENST00000561400 DEFB114Q30KQ6 69 aa8.74□□□□□ -1.01
HERC1-214ENST00000561400 SLC25A22Q9H936 323 aa8.74□□□□□ -1.01
HERC1-214ENST00000561400 IGLV1-51P01701 117 aa8.74□□□□□ -1.01
HERC1-214ENST00000561400 HLA-DQA1P01909 254 aa8.74□□□□□ -1.01
HERC1-214ENST00000561400 OXLD1Q5BKU9 147 aa8.74□□□□□ -1.01
HERC1-214ENST00000561400 C9orf66Q5T8R8 295 aa8.74□□□□□ -1.01
HERC1-214ENST00000561400 RPP25LQ8N5L8 163 aaKnown RBP8.74□□□□□ -1.01
HERC1-214ENST00000561400 GATD1Q8NB37 220 aa8.74□□□□□ -1.01
HERC1-214ENST00000561400 NBEAL1Q6ZS30 2694 aa8.73□□□□□ -1.01
HERC1-214ENST00000561400 DUSP14O95147 198 aaKnown RBP8.73□□□□□ -1.01
HERC1-214ENST00000561400 FRMD6-AS1P0C7T7 363 aa8.73□□□□□ -1.01
HERC1-214ENST00000561400 DYNLRB2Q8TF09 96 aa8.73□□□□□ -1.01
HERC1-214ENST00000561400 NOTCH1P46531 2555 aa8.73□□□□□ -1.01
HERC1-214ENST00000561400 IZUMO1RA6ND01 250 aa8.73□□□□□ -1.01
HERC1-214ENST00000561400 GCSHP23434 173 aa8.73□□□□□ -1.01
HERC1-214ENST00000561400 TAS2R45P59539 299 aa8.73□□□□□ -1.01
HERC1-214ENST00000561400 CFAP126Q5VTH2 177 aa8.73□□□□□ -1.01
HERC1-214ENST00000561400 MIR17HGQ75NE6 70 aa8.73□□□□□ -1.01
HERC1-214ENST00000561400 TMEM61Q8N0U2 210 aa8.73□□□□□ -1.01
HERC1-214ENST00000561400 CARD19Q96LW7 228 aa8.73□□□□□ -1.01
HERC1-214ENST00000561400 KLF12Q9Y4X4 402 aa8.73□□□□□ -1.01
HERC1-214ENST00000561400 A8MZ25 164 aa8.72□□□□□ -1.01
HERC1-214ENST00000561400 IGLL5B9A064 214 aa8.72□□□□□ -1.01
HERC1-214ENST00000561400 CSN1S1P47710 185 aa8.72□□□□□ -1.01
HERC1-214ENST00000561400 LINC00336Q6ZUF6 198 aa8.72□□□□□ -1.01
HERC1-214ENST00000561400 IGKV3-7A0A075B6H7 116 aa8.72□□□□□ -1.01
HERC1-214ENST00000561400 C9orf153Q5TBE3 101 aa8.72□□□□□ -1.01
HERC1-214ENST00000561400 FAM167A-AS1Q96KT0 104 aa8.72□□□□□ -1.01
HERC1-214ENST00000561400 LINC00479Q96M42 142 aa8.72□□□□□ -1.01
HERC1-214ENST00000561400 JPT2Q9H910 190 aa8.72□□□□□ -1.01
HERC1-214ENST00000561400 SMAD5-AS1Q9Y6J3 95 aa8.72□□□□□ -1.01
HERC1-214ENST00000561400 SMCPP49901 116 aaPredicted RBP8.71□□□□□ -1.02
HERC1-214ENST00000561400 C17orf77Q96MU5 243 aa8.71□□□□□ -1.02
HERC1-214ENST00000561400 M0R2P5 195 aa8.7□□□□□ -1.02
HERC1-214ENST00000561400 MRPS12O15235 138 aaKnown RBP8.7□□□□□ -1.02
HERC1-214ENST00000561400 PMVKQ15126 192 aa8.7□□□□□ -1.02
HERC1-214ENST00000561400 AMTNQ6UX39 209 aa8.7□□□□□ -1.02
HERC1-214ENST00000561400 TEN1Q86WV5 123 aa8.7□□□□□ -1.02
HERC1-214ENST00000561400 C10orf126Q8N4M7 172 aa8.7□□□□□ -1.02
HERC1-214ENST00000561400 SLC25A2Q9BXI2 301 aa8.7□□□□□ -1.02
HERC1-214ENST00000561400 FAM236AA0A1B0GUQ0 79 aa8.7□□□□□ -1.02
HERC1-214ENST00000561400 FAM236BA0A1B0GV22 79 aa8.7□□□□□ -1.02
HERC1-214ENST00000561400 RPL11P62913 178 aaKnown RBP8.7□□□□□ -1.02
HERC1-214ENST00000561400 C1orf195Q5TG92 126 aa8.7□□□□□ -1.02
HERC1-214ENST00000561400 C3orf22Q8N5N4 141 aa8.7□□□□□ -1.02
HERC1-214ENST00000561400 ZNF503Q96F45 646 aa8.7□□□□□ -1.02
HERC1-214ENST00000561400 PYYP10082 97 aa8.69□□□□□ -1.02
HERC1-214ENST00000561400 LINC01545Q5VT33 79 aa8.69□□□□□ -1.02
HERC1-214ENST00000561400 GP9P14770 177 aa8.69□□□□□ -1.02
HERC1-214ENST00000561400 LEPROTL1O95214 131 aa8.68□□□□□ -1.02
HERC1-214ENST00000561400 Q6ZQT7 251 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms