RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 MRPS15P82914 257 aaKnown RBP-0.46□□□□□ -2.48
USP8-218ENST00000561330 SSBP1Q04837 148 aaKnown RBP-0.46□□□□□ -2.48
USP8-218ENST00000561330 OR2T2Q6IF00 324 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 SNX29P2Q8IUI4 249 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 THEM6Q8WUY1 208 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 IFI27L1Q96BM0 104 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 CALML5Q9NZT1 146 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 METTL1Q9UBP6 276 aaKnown RBP-0.46□□□□□ -2.48
USP8-218ENST00000561330 NDUFAF1Q9Y375 327 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 ACANP16112 2415 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.46□□□□□ -2.48
USP8-218ENST00000561330 PPRC1Q5VV67 1664 aaKnown RBP-0.46□□□□□ -2.48
USP8-218ENST00000561330 LAMB1P07942 1786 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 KDM5CP41229 1560 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 A0A087WTM6 91 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 A0A1W2PRE2 83 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 PRM1P04553 51 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 SLC25A6P12236 298 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 CCL3L1P16619 93 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 RPL7P18124 248 aaKnown RBP-0.47□□□□□ -2.48
USP8-218ENST00000561330 G0S2P27469 103 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 POLR2HP52434 150 aaKnown RBP-0.47□□□□□ -2.48
USP8-218ENST00000561330 OR8B8Q15620 311 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 HSD17B12Q53GQ0 312 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 TMEM78Q5T7P6 136 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 C20orf197Q8N268 126 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 COX7B2Q8TF08 81 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 DYNLRB2Q8TF09 96 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 Q96NJ1 140 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 BOLA2Q9H3K6 86 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 CCDC171Q6TFL3 1326 aa-0.47□□□□□ -2.48
USP8-218ENST00000561330 TENM2Q9NT68 2774 aa-0.47□□□□□ -2.49
USP8-218ENST00000561330 WNK3Q9BYP7 1800 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 WDR97A6NE52 1622 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 TRGV1A0A0A0MS02 117 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 BORCS7-ASMTA0A0B4J1R7 106 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 TRAV22A0A0B4J277 110 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 DEGS1O15121 323 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 INSL4Q14641 139 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 CCDC115Q96NT0 180 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 CNFNQ9BYD5 112 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 BATF3Q9NR55 127 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 ATPIF1Q9UII2 106 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 SCP2D1Q9UJQ7 156 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 ERG28Q9UKR5 140 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 NOP16Q9Y3C1 178 aaKnown RBP-0.48□□□□□ -2.49
USP8-218ENST00000561330 PLXNB2O15031 1838 aa-0.48□□□□□ -2.49
USP8-218ENST00000561330 SPTA1P02549 2419 aa-0.49□□□□□ -2.49
USP8-218ENST00000561330 TRAV2A0A0B4J234 112 aa-0.49□□□□□ -2.49
USP8-218ENST00000561330 TMEM238C9JI98 176 aa-0.49□□□□□ -2.49
USP8-218ENST00000561330 PAEPP09466 180 aa-0.49□□□□□ -2.49
USP8-218ENST00000561330 SPINK8P0C7L1 97 aa-0.49□□□□□ -2.49
USP8-218ENST00000561330 NPC2P61916 151 aa-0.49□□□□□ -2.49
USP8-218ENST00000561330 Q8IZM0 81 aa-0.49□□□□□ -2.49
USP8-218ENST00000561330 PCBD2Q9H0N5 130 aa-0.49□□□□□ -2.49
USP8-218ENST00000561330 MED23Q9ULK4 1368 aa-0.49□□□□□ -2.49
USP8-218ENST00000561330 COL6A3P12111 3177 aa-0.5□□□□□ -2.49
USP8-218ENST00000561330 TRAV12-3A0A0B4J271 114 aa-0.5□□□□□ -2.49
USP8-218ENST00000561330 SMIM24O75264 130 aa-0.5□□□□□ -2.49
USP8-218ENST00000561330 RBP4P02753 201 aa-0.5□□□□□ -2.49
USP8-218ENST00000561330 SPRR1AP35321 89 aa-0.5□□□□□ -2.49
USP8-218ENST00000561330 SPCS2Q15005 226 aa-0.5□□□□□ -2.49
USP8-218ENST00000561330 Q5VSD8 79 aa-0.5□□□□□ -2.49
USP8-218ENST00000561330 NDUFA11Q86Y39 141 aa-0.5□□□□□ -2.49
USP8-218ENST00000561330 TMEM35BQ8NCS4 154 aa-0.5□□□□□ -2.49
USP8-218ENST00000561330 OR9Q1Q8NGQ5 310 aa-0.5□□□□□ -2.49
USP8-218ENST00000561330 GOLGA3Q08378 1498 aa-0.5□□□□□ -2.49
USP8-218ENST00000561330 MYH6P13533 1939 aa-0.5□□□□□ -2.49
USP8-218ENST00000561330 LRP1BQ9NZR2 4599 aa-0.5□□□□□ -2.49
USP8-218ENST00000561330 TRAV1-2A0A0B4J238 106 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 E5RI56 91 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 NPFFO15130 113 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 FLNBO75369 2602 aaKnown RBP-0.51□□□□□ -2.49
USP8-218ENST00000561330 DPM2O94777 84 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 MT-ND4LP03901 98 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 GNG10P50151 68 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 ROCK1Q13464 1354 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 ARHGAP31Q2M1Z3 1444 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 CLLU1Q5K131 121 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 SAMD13Q5VXD3 122 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 TMEM91Q6ZNR0 172 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 ATP6V0E2Q8NHE4 81 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 CDC26Q8NHZ8 85 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 CDK5RAP2Q96SN8 1893 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 BANF2Q9H503 90 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 NPVFQ9HCQ7 196 aa-0.51□□□□□ -2.49
USP8-218ENST00000561330 GVINP1Q7Z2Y8 2422 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 CNOT1A5YKK6 2376 aaKnown RBP-0.52□□□□□ -2.49
USP8-218ENST00000561330 MUC22E2RYF6 1773 aaPredicted RBP-0.52□□□□□ -2.49
USP8-218ENST00000561330 IFT172Q9UG01 1749 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 PTPRMP28827 1452 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 FXYD6-FXYD2A0A087WZ82 144 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 TRBV10-3A0A0K0K1G6 114 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 FAM92AA1XBS5 289 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 G3V318 75 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 CCDC179H3BU77 68 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 J3QLW9 94 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 APOC4-APOC2K7ER74 178 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 SMIM6P0DI80 62 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 S100GP29377 79 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms