RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 SCN3BQ9NY72 215 aa-2□□□□□ -2.73
CASC4-211ENST00000561305 ZMYM4Q5VZL5 1548 aa-2.01□□□□□ -2.73
CASC4-211ENST00000561305 MGAM2Q2M2H8 2515 aa-2.01□□□□□ -2.73
CASC4-211ENST00000561305 CXorf51AA0A1B0GTR3 108 aa-2.01□□□□□ -2.73
CASC4-211ENST00000561305 ERVS71-1P61550 626 aa-2.01□□□□□ -2.73
CASC4-211ENST00000561305 CCL7P80098 99 aa-2.01□□□□□ -2.73
CASC4-211ENST00000561305 LYSTQ99698 3801 aa-2.01□□□□□ -2.73
CASC4-211ENST00000561305 SMIM7Q9BQ49 75 aa-2.01□□□□□ -2.73
CASC4-211ENST00000561305 DYNC1H1Q14204 4646 aaKnown RBP-2.02□□□□□ -2.73
CASC4-211ENST00000561305 RIIAD1A6NNX1 92 aa-2.02□□□□□ -2.73
CASC4-211ENST00000561305 CST2P09228 141 aa-2.02□□□□□ -2.73
CASC4-211ENST00000561305 ADCYAP1P18509 176 aa-2.02□□□□□ -2.73
CASC4-211ENST00000561305 OR8B8Q15620 311 aa-2.02□□□□□ -2.73
CASC4-211ENST00000561305 AGPAT4-IT1Q9H0P7 198 aa-2.02□□□□□ -2.73
CASC4-211ENST00000561305 MED11Q9P086 117 aa-2.02□□□□□ -2.73
CASC4-211ENST00000561305 CMYA5Q8N3K9 4069 aa-2.02□□□□□ -2.73
CASC4-211ENST00000561305 ADCY9O60503 1353 aa-2.02□□□□□ -2.73
CASC4-211ENST00000561305 LOC107986453A0A1B0GWG9 222 aa-2.03□□□□□ -2.73
CASC4-211ENST00000561305 TPT1P13693 172 aaKnown RBP-2.03□□□□□ -2.73
CASC4-211ENST00000561305 MT1HP80294 61 aa-2.03□□□□□ -2.73
CASC4-211ENST00000561305 SPA17Q15506 151 aa-2.03□□□□□ -2.73
CASC4-211ENST00000561305 C20orf197Q8N268 126 aa-2.03□□□□□ -2.73
CASC4-211ENST00000561305 PPDPFLQ8WWR9 84 aa-2.03□□□□□ -2.73
CASC4-211ENST00000561305 MAFIPQ8WZ33 124 aa-2.03□□□□□ -2.73
CASC4-211ENST00000561305 AP3S1Q92572 193 aa-2.03□□□□□ -2.73
CASC4-211ENST00000561305 PAIP2Q9BPZ3 127 aaKnown RBP-2.03□□□□□ -2.73
CASC4-211ENST00000561305 C9orf16Q9BUW7 83 aa-2.03□□□□□ -2.73
CASC4-211ENST00000561305 PCF11O94913 1555 aaKnown RBP-2.03□□□□□ -2.73
CASC4-211ENST00000561305 ACACAQ13085 2346 aa-2.03□□□□□ -2.74
CASC4-211ENST00000561305 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.03□□□□□ -2.74
CASC4-211ENST00000561305 ADGRB1O14514 1584 aa-2.04□□□□□ -2.74
CASC4-211ENST00000561305 APOA2P02652 100 aa-2.04□□□□□ -2.74
CASC4-211ENST00000561305 TFF1P04155 84 aa-2.04□□□□□ -2.74
CASC4-211ENST00000561305 IFNA6P05013 189 aa-2.04□□□□□ -2.74
CASC4-211ENST00000561305 PLB1Q6P1J6 1458 aa-2.04□□□□□ -2.74
CASC4-211ENST00000561305 NDUFA11Q86Y39 141 aa-2.04□□□□□ -2.74
CASC4-211ENST00000561305 DEFB123Q8N688 67 aa-2.04□□□□□ -2.74
CASC4-211ENST00000561305 WFDC6Q9BQY6 131 aa-2.04□□□□□ -2.74
CASC4-211ENST00000561305 LXNQ9BS40 222 aa-2.04□□□□□ -2.74
CASC4-211ENST00000561305 RTL8AQ9BWD3 113 aa-2.04□□□□□ -2.74
CASC4-211ENST00000561305 IFT172Q9UG01 1749 aa-2.04□□□□□ -2.74
CASC4-211ENST00000561305 PRNDQ9UKY0 176 aa-2.04□□□□□ -2.74
CASC4-211ENST00000561305 DMXL1Q9Y485 3027 aa-2.04□□□□□ -2.74
CASC4-211ENST00000561305 SACSQ9NZJ4 4579 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 TANC2Q9HCD6 1990 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 PHIPQ8WWQ0 1821 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 WDR97A6NE52 1622 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 G3V2T6 193 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 KPNA4O00629 521 aaPredicted RBP-2.05□□□□□ -2.74
CASC4-211ENST00000561305 NCR2O95944 276 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 MAXP61244 160 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 GNG5P63218 68 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 CFAP126Q5VTH2 177 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 NEK7Q8TDX7 302 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 CFAP53Q96M91 514 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 NPVFQ9HCQ7 196 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 FKBP11Q9NYL4 201 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 PYCARDQ9ULZ3 195 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 CELSR3Q9NYQ7 3312 aa-2.05□□□□□ -2.74
CASC4-211ENST00000561305 RIF1Q5UIP0 2472 aaKnown RBP-2.06□□□□□ -2.74
CASC4-211ENST00000561305 DLC1Q96QB1 1528 aa-2.06□□□□□ -2.74
CASC4-211ENST00000561305 ZZEF1O43149 2961 aa-2.06□□□□□ -2.74
CASC4-211ENST00000561305 NSD3Q9BZ95 1437 aa-2.06□□□□□ -2.74
CASC4-211ENST00000561305 DNAH7Q8WXX0 4024 aa-2.06□□□□□ -2.74
CASC4-211ENST00000561305 H7C1C5 153 aa-2.06□□□□□ -2.74
CASC4-211ENST00000561305 LCN6P62502 163 aa-2.06□□□□□ -2.74
CASC4-211ENST00000561305 PTRHD1Q6GMV3 140 aaKnown RBP-2.06□□□□□ -2.74
CASC4-211ENST00000561305 C3orf33Q6P1S2 294 aa-2.06□□□□□ -2.74
CASC4-211ENST00000561305 NUBP2Q9Y5Y2 271 aa-2.06□□□□□ -2.74
CASC4-211ENST00000561305 DNAH1Q9P2D7 4330 aa-2.06□□□□□ -2.74
CASC4-211ENST00000561305 KDM5AP29375 1690 aaKnown RBP-2.06□□□□□ -2.74
CASC4-211ENST00000561305 GAPVD1Q14C86 1478 aa-2.07□□□□□ -2.74
CASC4-211ENST00000561305 H0YJX3 145 aa-2.07□□□□□ -2.74
CASC4-211ENST00000561305 J3KT08 172 aa-2.07□□□□□ -2.74
CASC4-211ENST00000561305 KALRNO60229 2985 aa-2.07□□□□□ -2.74
CASC4-211ENST00000561305 EDDM3BP56851 147 aa-2.07□□□□□ -2.74
CASC4-211ENST00000561305 NPC2P61916 151 aa-2.07□□□□□ -2.74
CASC4-211ENST00000561305 C9orf62Q8N4C0 152 aa-2.07□□□□□ -2.74
CASC4-211ENST00000561305 OR5H6Q8NGV6 325 aa-2.07□□□□□ -2.74
CASC4-211ENST00000561305 BRK1Q8WUW1 75 aa-2.07□□□□□ -2.74
CASC4-211ENST00000561305 IFI27L1Q96BM0 104 aa-2.07□□□□□ -2.74
CASC4-211ENST00000561305 ARMC1Q9NVT9 282 aa-2.07□□□□□ -2.74
CASC4-211ENST00000561305 ADGBQ8N7X0 1667 aa-2.07□□□□□ -2.74
CASC4-211ENST00000561305 TCOF1Q13428 1488 aaKnown RBP-2.07□□□□□ -2.74
CASC4-211ENST00000561305 ARF6P62330 175 aa-2.08□□□□□ -2.74
CASC4-211ENST00000561305 RTL8BQ17RB0 113 aa-2.08□□□□□ -2.74
CASC4-211ENST00000561305 NUP35Q8NFH5 326 aa-2.08□□□□□ -2.74
CASC4-211ENST00000561305 PRELID3AQ96N28 172 aa-2.08□□□□□ -2.74
CASC4-211ENST00000561305 IL20Q9NYY1 176 aa-2.08□□□□□ -2.74
CASC4-211ENST00000561305 LRRK2Q5S007 2527 aa-2.08□□□□□ -2.74
CASC4-211ENST00000561305 PTPRMP28827 1452 aa-2.08□□□□□ -2.74
CASC4-211ENST00000561305 NRXN2Q9P2S2 1712 aa-2.08□□□□□ -2.74
CASC4-211ENST00000561305 TROQ12816 1431 aaPredicted RBP-2.08□□□□□ -2.74
CASC4-211ENST00000561305 COL12A1Q99715 3063 aa-2.09□□□□□ -2.74
CASC4-211ENST00000561305 PKD1L2Q7Z442 2459 aa-2.09□□□□□ -2.74
CASC4-211ENST00000561305 ADAMTS12P58397 1594 aa-2.09□□□□□ -2.74
CASC4-211ENST00000561305 KNL1Q8NG31 2342 aa-2.09□□□□□ -2.74
CASC4-211ENST00000561305 IGHV1-24A0A0C4DH33 117 aa-2.09□□□□□ -2.74
CASC4-211ENST00000561305 SLC25A4P12235 298 aa-2.09□□□□□ -2.74
CASC4-211ENST00000561305 AKR1D1P51857 326 aa-2.09□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms