RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 INO80EQ8NBZ0 244 aaPredicted RBP11.43□□□□□ -0.58
CRTC3-208ENST00000560098 DEFB104AQ8WTQ1 72 aa11.43□□□□□ -0.58
CRTC3-208ENST00000560098 HIST1H2BAQ96A08 127 aa11.43□□□□□ -0.58
CRTC3-208ENST00000560098 ZC2HC1AQ96GY0 325 aa11.43□□□□□ -0.58
CRTC3-208ENST00000560098 NKX6-2Q9C056 277 aaPredicted RBP11.43□□□□□ -0.58
CRTC3-208ENST00000560098 IGKV2D-24A0A075B6R9 120 aa11.43□□□□□ -0.58
CRTC3-208ENST00000560098 GRIFINA4D1Z8 144 aa11.43□□□□□ -0.58
CRTC3-208ENST00000560098 KRTAP29-1A8MX34 341 aaPredicted RBP11.43□□□□□ -0.58
CRTC3-208ENST00000560098 SCXQ7RTU7 201 aa11.43□□□□□ -0.58
CRTC3-208ENST00000560098 COX8CQ7Z4L0 72 aa11.43□□□□□ -0.58
CRTC3-208ENST00000560098 DNAJC30Q96LL9 226 aa11.43□□□□□ -0.58
CRTC3-208ENST00000560098 KLK12Q9UKR0 248 aa11.43□□□□□ -0.58
CRTC3-208ENST00000560098 A0A087WWL8 130 aa11.42□□□□□ -0.58
CRTC3-208ENST00000560098 BORCS7-ASMTA0A0B4J1R7 106 aa11.42□□□□□ -0.58
CRTC3-208ENST00000560098 RNF222A6NCQ9 220 aa11.42□□□□□ -0.58
CRTC3-208ENST00000560098 FAM74A7A6NL05 159 aa11.42□□□□□ -0.58
CRTC3-208ENST00000560098 SH2D1AO60880 128 aa11.42□□□□□ -0.58
CRTC3-208ENST00000560098 SFRP2Q96HF1 295 aa11.42□□□□□ -0.58
CRTC3-208ENST00000560098 ZFP30Q9Y2G7 519 aa11.42□□□□□ -0.58
CRTC3-208ENST00000560098 PHLDA3Q9Y5J5 127 aa11.42□□□□□ -0.58
CRTC3-208ENST00000560098 A0A087WX48 190 aa11.41□□□□□ -0.58
CRTC3-208ENST00000560098 FAM162BQ5T6X4 162 aa11.41□□□□□ -0.58
CRTC3-208ENST00000560098 UBE2WQ96B02 151 aa11.41□□□□□ -0.58
CRTC3-208ENST00000560098 CHCHD7Q9BUK0 85 aa11.41□□□□□ -0.58
CRTC3-208ENST00000560098 M0R381 172 aa11.4□□□□□ -0.58
CRTC3-208ENST00000560098 GIPP09681 153 aaPredicted RBP11.4□□□□□ -0.58
CRTC3-208ENST00000560098 TPT1P13693 172 aaKnown RBP11.4□□□□□ -0.58
CRTC3-208ENST00000560098 ELOBQ15370 118 aa11.4□□□□□ -0.58
CRTC3-208ENST00000560098 TRBV10-1A0A0K0K1A3 114 aa11.39□□□□□ -0.59
CRTC3-208ENST00000560098 PTTG1O95997 202 aa11.39□□□□□ -0.59
CRTC3-208ENST00000560098 UBE2G1P62253 170 aa11.39□□□□□ -0.59
CRTC3-208ENST00000560098 AKR1C8PQ5T2L2 129 aa11.39□□□□□ -0.59
CRTC3-208ENST00000560098 KCNIP4Q6PIL6 250 aa11.39□□□□□ -0.59
CRTC3-208ENST00000560098 FMC1Q96HJ9 113 aa11.39□□□□□ -0.59
CRTC3-208ENST00000560098 CHAC1Q9BUX1 264 aa11.39□□□□□ -0.59
CRTC3-208ENST00000560098 FXYD6-FXYD2A0A087WZ82 144 aa11.38□□□□□ -0.59
CRTC3-208ENST00000560098 TMSB15BA0A087X1C1 80 aa11.38□□□□□ -0.59
CRTC3-208ENST00000560098 RPL36AP83881 106 aaKnown RBP11.38□□□□□ -0.59
CRTC3-208ENST00000560098 ZNF674Q2M3X9 581 aa11.38□□□□□ -0.59
CRTC3-208ENST00000560098 LINC01559Q495D7 138 aa11.38□□□□□ -0.59
CRTC3-208ENST00000560098 ATRAIDQ6UW56 229 aa11.38□□□□□ -0.59
CRTC3-208ENST00000560098 ZFP82Q8N141 532 aa11.38□□□□□ -0.59
CRTC3-208ENST00000560098 RPL36ALQ969Q0 106 aaKnown RBP11.38□□□□□ -0.59
CRTC3-208ENST00000560098 TRBV7-3A0A075B6L6 115 aa11.37□□□□□ -0.59
CRTC3-208ENST00000560098 UBE2D3P61077 147 aa11.37□□□□□ -0.59
CRTC3-208ENST00000560098 UBE2D2P62837 147 aa11.37□□□□□ -0.59
CRTC3-208ENST00000560098 TRBV6-1A0A0K0K1D8 114 aa11.36□□□□□ -0.59
CRTC3-208ENST00000560098 MAP1LC3B2A6NCE7 125 aa11.36□□□□□ -0.59
CRTC3-208ENST00000560098 Q0VG73 95 aa11.36□□□□□ -0.59
CRTC3-208ENST00000560098 MAP1LC3BQ9GZQ8 125 aa11.36□□□□□ -0.59
CRTC3-208ENST00000560098 LRP1Q07954 4544 aaKnown RBP11.36□□□□□ -0.59
CRTC3-208ENST00000560098 LTAP01374 205 aa11.35□□□□□ -0.59
CRTC3-208ENST00000560098 CIRBP-AS1Q8TBR5 109 aa11.35□□□□□ -0.59
CRTC3-208ENST00000560098 TCEAL7Q9BRU2 100 aa11.35□□□□□ -0.59
CRTC3-208ENST00000560098 TMEM262E9PQX1 116 aa11.35□□□□□ -0.59
CRTC3-208ENST00000560098 FHITP49789 147 aa11.35□□□□□ -0.59
CRTC3-208ENST00000560098 KRTAP10-4P60372 401 aaPredicted RBP11.35□□□□□ -0.59
CRTC3-208ENST00000560098 OR10G8Q8NGN5 311 aa11.35□□□□□ -0.59
CRTC3-208ENST00000560098 C14orf177Q52M58 125 aa11.34□□□□□ -0.59
CRTC3-208ENST00000560098 CST9LP1Q5W188 147 aa11.34□□□□□ -0.59
CRTC3-208ENST00000560098 C1orf43Q9BWL3 253 aa11.34□□□□□ -0.59
CRTC3-208ENST00000560098 TRBV6-8A0A0A6YYG3 113 aa11.33□□□□□ -0.6
CRTC3-208ENST00000560098 RAB4BP61018 213 aa11.33□□□□□ -0.6
CRTC3-208ENST00000560098 ENHOQ6UWT2 76 aa11.33□□□□□ -0.6
CRTC3-208ENST00000560098 CRPP02741 224 aa11.32□□□□□ -0.6
CRTC3-208ENST00000560098 AKR1C3P42330 323 aa11.32□□□□□ -0.6
CRTC3-208ENST00000560098 STOML3Q8TAV4 291 aa11.32□□□□□ -0.6
CRTC3-208ENST00000560098 FAT3Q8TDW7 4589 aa11.32□□□□□ -0.6
CRTC3-208ENST00000560098 IGLV2-8P01709 118 aa11.31□□□□□ -0.6
CRTC3-208ENST00000560098 ZNF56Q15929 161 aa11.31□□□□□ -0.6
CRTC3-208ENST00000560098 C15orf54Q8N8G6 183 aa11.31□□□□□ -0.6
CRTC3-208ENST00000560098 CYTL1Q9NRR1 136 aa11.31□□□□□ -0.6
CRTC3-208ENST00000560098 HMCN2Q8NDA2 5059 aa11.3□□□□□ -0.6
CRTC3-208ENST00000560098 MPV17L2Q567V2 206 aa11.3□□□□□ -0.6
CRTC3-208ENST00000560098 SERTAD4-AS1Q5TG53 156 aa11.3□□□□□ -0.6
CRTC3-208ENST00000560098 PRR27Q6MZM9 219 aa11.3□□□□□ -0.6
CRTC3-208ENST00000560098 NEXN-AS1Q8NBZ9 246 aa11.3□□□□□ -0.6
CRTC3-208ENST00000560098 OR10AG1Q8NH19 301 aa11.3□□□□□ -0.6
CRTC3-208ENST00000560098 G3V3Q6 166 aa11.29□□□□□ -0.6
CRTC3-208ENST00000560098 OXTP01178 125 aa11.29□□□□□ -0.6
CRTC3-208ENST00000560098 ANGP03950 147 aaKnown RBP11.29□□□□□ -0.6
CRTC3-208ENST00000560098 RPL19P84098 196 aaKnown RBP11.29□□□□□ -0.6
CRTC3-208ENST00000560098 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.29□□□□□ -0.6
CRTC3-208ENST00000560098 ZNF471Q9BX82 626 aaPredicted RBP11.29□□□□□ -0.6
CRTC3-208ENST00000560098 ARPC5O15511 151 aa11.28□□□□□ -0.6
CRTC3-208ENST00000560098 PAGE4O60829 102 aa11.28□□□□□ -0.6
CRTC3-208ENST00000560098 CXCL1P09341 107 aa11.28□□□□□ -0.6
CRTC3-208ENST00000560098 PKIAP61925 76 aa11.28□□□□□ -0.6
CRTC3-208ENST00000560098 CHCHD5Q9BSY4 110 aa11.28□□□□□ -0.6
CRTC3-208ENST00000560098 BATF3Q9NR55 127 aa11.28□□□□□ -0.6
CRTC3-208ENST00000560098 S100A9P06702 114 aaKnown RBP11.27□□□□□ -0.6
CRTC3-208ENST00000560098 USP17L23D6RBM5 183 aa11.26□□□□□ -0.61
CRTC3-208ENST00000560098 SNAI2O43623 268 aa11.26□□□□□ -0.61
CRTC3-208ENST00000560098 HLA-DQA1P01909 254 aa11.26□□□□□ -0.61
CRTC3-208ENST00000560098 MIAQ16674 131 aa11.26□□□□□ -0.61
CRTC3-208ENST00000560098 MLST8Q9BVC4 326 aa11.26□□□□□ -0.61
CRTC3-208ENST00000560098 SSBP4Q9BWG4 385 aaPredicted RBP11.26□□□□□ -0.61
CRTC3-208ENST00000560098 F5H697 171 aa11.26□□□□□ -0.61
CRTC3-208ENST00000560098 TMEM97Q5BJF2 176 aa11.26□□□□□ -0.61
CRTC3-208ENST00000560098 SPANXN1Q5VSR9 72 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms