RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 Q6ZQT7 251 aa3.89□□□□□ -1.79
HMG20A-204ENST00000558288 BAALCQ8WXS3 180 aa3.89□□□□□ -1.79
HMG20A-204ENST00000558288 RPL39LQ96EH5 51 aaKnown RBP3.89□□□□□ -1.79
HMG20A-204ENST00000558288 BEX4Q9NWD9 120 aaPredicted RBP3.89□□□□□ -1.79
HMG20A-204ENST00000558288 C11orf21Q9P2W6 132 aa3.89□□□□□ -1.79
HMG20A-204ENST00000558288 GAGE12JA6NER3 117 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 LINC01619G3V211 115 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 CCDC179H3BU77 68 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 GAGE7O76087 117 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 GAGE12FP0CL80 117 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 GAGE12GP0CL81 117 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 GAGE12IP0CL82 117 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 NDUFV3P56181 108 aaKnown RBP3.88□□□□□ -1.79
HMG20A-204ENST00000558288 UBE2D3P61077 147 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 UBE2D2P62837 147 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 GAGE4Q13068 117 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 SHISA2Q6UWI4 295 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 COX8CQ7Z4L0 72 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 TRPT1Q86TN4 253 aaKnown RBP3.88□□□□□ -1.79
HMG20A-204ENST00000558288 ZNF575Q86XF7 245 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 C14orf178Q8N769 122 aaPredicted RBP3.88□□□□□ -1.79
HMG20A-204ENST00000558288 NEXN-AS1Q8NBZ9 246 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 RNASE6Q93091 150 aaKnown RBP3.88□□□□□ -1.79
HMG20A-204ENST00000558288 YAE1D1Q9NRH1 226 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 FAM215AQ9Y5M1 114 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 TRAV4A0A0B4J268 109 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 TRBV7-9A0A0J9YWB2 115 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 INAFM1C9JVW0 142 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 IGHV4-39P01824 125 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 IGHG4P01861 327 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 IFITM1P13164 125 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 SRSF2Q01130 221 aaKnown RBP3.88□□□□□ -1.79
HMG20A-204ENST00000558288 NUP37Q8NFH4 326 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 RASL10AQ92737 203 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 TOMM6Q96B49 74 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 AGPAT4-IT1Q9H0P7 198 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 CFC1BP0CG36 223 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 CFC1P0CG37 223 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 DEFB113Q30KQ7 82 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 NTN5Q8WTR8 489 aaPredicted RBP3.88□□□□□ -1.79
HMG20A-204ENST00000558288 AJUBAQ96IF1 538 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 FANCD2OSQ96PS1 177 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 SLC50A1Q9BRV3 221 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 PRO1854Q9UHT4 67 aa3.88□□□□□ -1.79
HMG20A-204ENST00000558288 IGHV7-4-1A0A0J9YVY3 117 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 CD7P09564 240 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 Q6ZS46 218 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 C10orf126Q8N4M7 172 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 PHLDA3Q9Y5J5 127 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 IGLV11-55A0A075B6I3 123 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 TRAV2A0A0B4J234 112 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 TRAV8-4A0A0B4J246 113 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 A0A0J9YY99 117 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 C11orf86A6NJI1 115 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 RHODO00212 210 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 CRLF1O75462 422 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 LGALS3P17931 250 aaKnown RBP3.87□□□□□ -1.79
HMG20A-204ENST00000558288 CRIP2P52943 208 aaPredicted RBP3.87□□□□□ -1.79
HMG20A-204ENST00000558288 TIMD4Q96H15 378 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 IGHV3-64A0A075B6Q5 118 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 F8W735 103 aaPredicted RBP3.87□□□□□ -1.79
HMG20A-204ENST00000558288 DUSP14O95147 198 aaKnown RBP3.87□□□□□ -1.79
HMG20A-204ENST00000558288 CTSGP08311 255 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 NHLRC4P0CG21 123 aaPredicted RBP3.87□□□□□ -1.79
HMG20A-204ENST00000558288 ECSCRQ19T08 205 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 RNF5Q99942 180 aa3.87□□□□□ -1.79
HMG20A-204ENST00000558288 RNF223E7ERA6 249 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 RPL32P62910 135 aaKnown RBP3.86□□□□□ -1.79
HMG20A-204ENST00000558288 FAM159AQ6UWV7 190 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 C3orf56Q8N813 242 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 CITED1Q99966 193 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 KAAG1Q9UBP8 84 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 TP53TG1Q9Y2A0 90 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 A4D1N5 150 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 LY6G6DO95868 133 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 CLEC3BP05452 202 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 NDPQ00604 133 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 C15orf53Q8NAA6 179 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 C16orf92Q96LL3 132 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 DPH3P1Q9H4G8 78 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 DPM3Q9P2X0 92 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 TEX49A0A1B0GTD5 131 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 F5H697 171 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 TNFRSF13BO14836 293 aaPredicted RBP3.86□□□□□ -1.79
HMG20A-204ENST00000558288 IGHV3-30P01768 117 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 IGHV3-30-5P0DP03 117 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 SRD5A1P18405 259 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 ASIPP42127 132 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 C15orf32Q32M92 178 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 Q8N1Y9 231 aa3.86□□□□□ -1.79
HMG20A-204ENST00000558288 MEIG1Q5JSS6 88 aa3.85□□□□□ -1.79
HMG20A-204ENST00000558288 CLEC19AQ6UXS0 136 aa3.85□□□□□ -1.79
HMG20A-204ENST00000558288 ZANQ9Y493 2812 aa3.85□□□□□ -1.79
HMG20A-204ENST00000558288 RBAKDNA6NC62 111 aa3.85□□□□□ -1.79
HMG20A-204ENST00000558288 BUB3O43684 328 aa3.85□□□□□ -1.79
HMG20A-204ENST00000558288 IGF1P05019 195 aa3.85□□□□□ -1.79
HMG20A-204ENST00000558288 TSPEAR-AS2P59090 65 aa3.85□□□□□ -1.79
HMG20A-204ENST00000558288 RPL39P62891 51 aaKnown RBP3.85□□□□□ -1.79
HMG20A-204ENST00000558288 ATXN8Q156A1 80 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms