RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 MAP1LC3BQ9GZQ8 125 aa13.07□□□□□ -0.32
PRKCH-219ENST00000555906 DAZ3Q9NR90 486 aaKnown RBP13.07□□□□□ -0.32
PRKCH-219ENST00000555906 Q9UF83 564 aa13.07□□□□□ -0.32
PRKCH-219ENST00000555906 ARMS2P0C7Q2 107 aa13.06□□□□□ -0.32
PRKCH-219ENST00000555906 UBE2G1P62253 170 aa13.06□□□□□ -0.32
PRKCH-219ENST00000555906 Q6ZSA8 131 aa13.06□□□□□ -0.32
PRKCH-219ENST00000555906 FAM30AQ9NZY2 134 aa13.06□□□□□ -0.32
PRKCH-219ENST00000555906 COX11Q9Y6N1 276 aa13.06□□□□□ -0.32
PRKCH-219ENST00000555906 TRBV6-1A0A0K0K1D8 114 aa13.05□□□□□ -0.32
PRKCH-219ENST00000555906 G3V3Q6 166 aa13.05□□□□□ -0.32
PRKCH-219ENST00000555906 LINC01559Q495D7 138 aa13.05□□□□□ -0.32
PRKCH-219ENST00000555906 FAM74A4Q5TZK3 123 aa13.05□□□□□ -0.32
PRKCH-219ENST00000555906 PHLDA3Q9Y5J5 127 aa13.05□□□□□ -0.32
PRKCH-219ENST00000555906 SEC11BP0C7V7 166 aa13.04□□□□□ -0.32
PRKCH-219ENST00000555906 FHITP49789 147 aa13.04□□□□□ -0.32
PRKCH-219ENST00000555906 ZNF674Q2M3X9 581 aa13.04□□□□□ -0.32
PRKCH-219ENST00000555906 RMI2Q96E14 147 aa13.04□□□□□ -0.32
PRKCH-219ENST00000555906 SFRP2Q96HF1 295 aa13.04□□□□□ -0.32
PRKCH-219ENST00000555906 URGCP-MRPS24S4R325 110 aa13.04□□□□□ -0.32
PRKCH-219ENST00000555906 GRIFINA4D1Z8 144 aa13.03□□□□□ -0.32
PRKCH-219ENST00000555906 LECT2O14960 151 aa13.03□□□□□ -0.32
PRKCH-219ENST00000555906 LTAP01374 205 aa13.03□□□□□ -0.32
PRKCH-219ENST00000555906 TPT1P13693 172 aaKnown RBP13.03□□□□□ -0.32
PRKCH-219ENST00000555906 NIT1Q86X76 327 aa13.03□□□□□ -0.32
PRKCH-219ENST00000555906 ZFP82Q8N141 532 aa13.03□□□□□ -0.32
PRKCH-219ENST00000555906 A0A087WWL8 130 aa13.02□□□□□ -0.33
PRKCH-219ENST00000555906 TRBV10-1A0A0K0K1A3 114 aa13.02□□□□□ -0.33
PRKCH-219ENST00000555906 M0R381 172 aa13.02□□□□□ -0.33
PRKCH-219ENST00000555906 CHCHD7Q9BUK0 85 aa13.02□□□□□ -0.33
PRKCH-219ENST00000555906 CYTL1Q9NRR1 136 aa13.02□□□□□ -0.33
PRKCH-219ENST00000555906 ARPC5O15511 151 aa13.01□□□□□ -0.33
PRKCH-219ENST00000555906 STOML3Q8TAV4 291 aa13.01□□□□□ -0.33
PRKCH-219ENST00000555906 IGLV2-33A0A075B6J2 118 aaPredicted RBP13□□□□□ -0.33
PRKCH-219ENST00000555906 TMSB15BA0A087X1C1 80 aa13□□□□□ -0.33
PRKCH-219ENST00000555906 AKR1C3P42330 323 aa13□□□□□ -0.33
PRKCH-219ENST00000555906 RPL36AP83881 106 aaKnown RBP12.99□□□□□ -0.33
PRKCH-219ENST00000555906 CST9LP1Q5W188 147 aa12.99□□□□□ -0.33
PRKCH-219ENST00000555906 BAALCQ8WXS3 180 aa12.99□□□□□ -0.33
PRKCH-219ENST00000555906 RPL36ALQ969Q0 106 aaKnown RBP12.99□□□□□ -0.33
PRKCH-219ENST00000555906 PLA2G1BP04054 148 aaKnown RBP12.98□□□□□ -0.33
PRKCH-219ENST00000555906 UBE2D3P61077 147 aa12.98□□□□□ -0.33
PRKCH-219ENST00000555906 UBE2D2P62837 147 aa12.98□□□□□ -0.33
PRKCH-219ENST00000555906 ELOBQ15370 118 aa12.98□□□□□ -0.33
PRKCH-219ENST00000555906 KLK12Q9UKR0 248 aa12.98□□□□□ -0.33
PRKCH-219ENST00000555906 IGKV2D-24A0A075B6R9 120 aa12.97□□□□□ -0.33
PRKCH-219ENST00000555906 A0A087WX48 190 aa12.97□□□□□ -0.33
PRKCH-219ENST00000555906 CXCL1P09341 107 aa12.97□□□□□ -0.33
PRKCH-219ENST00000555906 ATRAIDQ6UW56 229 aa12.97□□□□□ -0.33
PRKCH-219ENST00000555906 LINC00528Q8N1L1 170 aa12.97□□□□□ -0.33
PRKCH-219ENST00000555906 Q8N976 141 aa12.97□□□□□ -0.33
PRKCH-219ENST00000555906 OR10G8Q8NGN5 311 aa12.97□□□□□ -0.33
PRKCH-219ENST00000555906 TRBV7-3A0A075B6L6 115 aa12.96□□□□□ -0.33
PRKCH-219ENST00000555906 KCNIP4Q6PIL6 250 aa12.96□□□□□ -0.33
PRKCH-219ENST00000555906 DNAJC30Q96LL9 226 aa12.96□□□□□ -0.33
PRKCH-219ENST00000555906 PAGE4O60829 102 aa12.95□□□□□ -0.34
PRKCH-219ENST00000555906 S100A9P06702 114 aaKnown RBP12.95□□□□□ -0.34
PRKCH-219ENST00000555906 ZNF345Q14585 488 aa12.95□□□□□ -0.34
PRKCH-219ENST00000555906 UBE2WQ96B02 151 aa12.95□□□□□ -0.34
PRKCH-219ENST00000555906 RAB4BP61018 213 aa12.94□□□□□ -0.34
PRKCH-219ENST00000555906 RGS21Q2M5E4 152 aa12.94□□□□□ -0.34
PRKCH-219ENST00000555906 RBFOX3A6NFN3 312 aa12.93□□□□□ -0.34
PRKCH-219ENST00000555906 Q0VG73 95 aa12.93□□□□□ -0.34
PRKCH-219ENST00000555906 ZNF56Q15929 161 aa12.93□□□□□ -0.34
PRKCH-219ENST00000555906 SCXQ7RTU7 201 aa12.93□□□□□ -0.34
PRKCH-219ENST00000555906 OR10AG1Q8NH19 301 aa12.93□□□□□ -0.34
PRKCH-219ENST00000555906 TRBV6-8A0A0A6YYG3 113 aa12.92□□□□□ -0.34
PRKCH-219ENST00000555906 SCO2A0A1W2PP80 73 aa12.92□□□□□ -0.34
PRKCH-219ENST00000555906 UMAD1C9J7I0 102 aa12.92□□□□□ -0.34
PRKCH-219ENST00000555906 SNAI2O43623 268 aa12.92□□□□□ -0.34
PRKCH-219ENST00000555906 PFDN1O60925 122 aa12.92□□□□□ -0.34
PRKCH-219ENST00000555906 RPL19P84098 196 aaKnown RBP12.92□□□□□ -0.34
PRKCH-219ENST00000555906 LINC01620Q4KN68 170 aa12.92□□□□□ -0.34
PRKCH-219ENST00000555906 PRR27Q6MZM9 219 aa12.92□□□□□ -0.34
PRKCH-219ENST00000555906 KCNRGQ8N5I3 272 aa12.92□□□□□ -0.34
PRKCH-219ENST00000555906 MBD3L1Q8WWY6 194 aa12.92□□□□□ -0.34
PRKCH-219ENST00000555906 MLST8Q9BVC4 326 aa12.92□□□□□ -0.34
PRKCH-219ENST00000555906 NEXN-AS1Q8NBZ9 246 aa12.91□□□□□ -0.34
PRKCH-219ENST00000555906 FAM213BQ8TBF2 198 aa12.91□□□□□ -0.34
PRKCH-219ENST00000555906 SFT2D1Q8WV19 159 aa12.91□□□□□ -0.34
PRKCH-219ENST00000555906 ZNF471Q9BX82 626 aaPredicted RBP12.91□□□□□ -0.34
PRKCH-219ENST00000555906 SMLR1H3BR10 107 aa12.9□□□□□ -0.34
PRKCH-219ENST00000555906 J3QL48 77 aa12.9□□□□□ -0.34
PRKCH-219ENST00000555906 OR5AL1P0C617 328 aa12.9□□□□□ -0.34
PRKCH-219ENST00000555906 C14orf177Q52M58 125 aa12.9□□□□□ -0.34
PRKCH-219ENST00000555906 SSBP4Q9BWG4 385 aaPredicted RBP12.9□□□□□ -0.34
PRKCH-219ENST00000555906 C1orf43Q9BWL3 253 aa12.9□□□□□ -0.34
PRKCH-219ENST00000555906 CRPP02741 224 aa12.89□□□□□ -0.35
PRKCH-219ENST00000555906 PKIAP61925 76 aa12.89□□□□□ -0.35
PRKCH-219ENST00000555906 MPV17L2Q567V2 206 aa12.89□□□□□ -0.35
PRKCH-219ENST00000555906 BAGE2Q86Y30 109 aa12.89□□□□□ -0.35
PRKCH-219ENST00000555906 DEFB104AQ8WTQ1 72 aa12.89□□□□□ -0.35
PRKCH-219ENST00000555906 CHAC1Q9BUX1 264 aa12.89□□□□□ -0.35
PRKCH-219ENST00000555906 A0A1B0GV50 99 aa12.88□□□□□ -0.35
PRKCH-219ENST00000555906 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.88□□□□□ -0.35
PRKCH-219ENST00000555906 KRTAP29-1A8MX34 341 aaPredicted RBP12.87□□□□□ -0.35
PRKCH-219ENST00000555906 TMEM262E9PQX1 116 aa12.87□□□□□ -0.35
PRKCH-219ENST00000555906 BCL2L11O43521 198 aa12.87□□□□□ -0.35
PRKCH-219ENST00000555906 SPANXN1Q5VSR9 72 aa12.87□□□□□ -0.35
PRKCH-219ENST00000555906 ENHOQ6UWT2 76 aa12.87□□□□□ -0.35
PRKCH-219ENST00000555906 C15orf54Q8N8G6 183 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms