RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 XCL1P47992 114 aa13.49□□□□□ -0.25
SYNE3-204ENST00000555759 CRIP3Q6Q6R5 217 aa13.49□□□□□ -0.25
SYNE3-204ENST00000555759 FRMPD3Q5JV73 1810 aa13.49□□□□□ -0.25
SYNE3-204ENST00000555759 E7EUB6 86 aa13.48□□□□□ -0.25
SYNE3-204ENST00000555759 ANGP03950 147 aaKnown RBP13.48□□□□□ -0.25
SYNE3-204ENST00000555759 BRWD1-AS2P59051 145 aa13.48□□□□□ -0.25
SYNE3-204ENST00000555759 SPRNQ5BIV9 151 aa13.48□□□□□ -0.25
SYNE3-204ENST00000555759 ARFGEF3Q5TH69 2177 aa13.48□□□□□ -0.25
SYNE3-204ENST00000555759 PKDREJQ9NTG1 2253 aa13.48□□□□□ -0.25
SYNE3-204ENST00000555759 GVINP1Q7Z2Y8 2422 aa13.48□□□□□ -0.25
SYNE3-204ENST00000555759 A0A0J9YXY3 114 aa13.48□□□□□ -0.25
SYNE3-204ENST00000555759 CENPVL3A0A0U1RRI6 287 aa13.48□□□□□ -0.25
SYNE3-204ENST00000555759 CACNA1GO43497 2377 aa13.48□□□□□ -0.25
SYNE3-204ENST00000555759 DENND4CQ5VZ89 1909 aa13.48□□□□□ -0.25
SYNE3-204ENST00000555759 ATP5EP2Q5VTU8 51 aa13.47□□□□□ -0.25
SYNE3-204ENST00000555759 DOCK7Q96N67 2140 aa13.47□□□□□ -0.25
SYNE3-204ENST00000555759 TRBV30A0A0K0K1B3 111 aa13.47□□□□□ -0.25
SYNE3-204ENST00000555759 F5H768 121 aa13.47□□□□□ -0.25
SYNE3-204ENST00000555759 BRK1Q8WUW1 75 aa13.47□□□□□ -0.25
SYNE3-204ENST00000555759 K7EQD1 137 aa13.46□□□□□ -0.25
SYNE3-204ENST00000555759 MP68P56378 58 aa13.46□□□□□ -0.25
SYNE3-204ENST00000555759 NREPQ16612 68 aa13.46□□□□□ -0.25
SYNE3-204ENST00000555759 C5orf38Q86SI9 138 aa13.46□□□□□ -0.25
SYNE3-204ENST00000555759 DOCK10Q96BY6 2186 aa13.46□□□□□ -0.25
SYNE3-204ENST00000555759 EIF4EBP1Q13541 118 aaPredicted RBP13.46□□□□□ -0.25
SYNE3-204ENST00000555759 HIST2H2BCQ6DN03 193 aa13.46□□□□□ -0.25
SYNE3-204ENST00000555759 RNF114Q9Y508 228 aa13.46□□□□□ -0.25
SYNE3-204ENST00000555759 IGKV2D-26A0A0A0MRZ7 120 aa13.46□□□□□ -0.26
SYNE3-204ENST00000555759 CFAP126Q5VTH2 177 aa13.46□□□□□ -0.26
SYNE3-204ENST00000555759 A0A0J9YY99 117 aa13.45□□□□□ -0.26
SYNE3-204ENST00000555759 NFE4Q86UQ8 179 aa13.45□□□□□ -0.26
SYNE3-204ENST00000555759 IGLV1-47P01700 117 aa13.45□□□□□ -0.26
SYNE3-204ENST00000555759 KIAA1671Q9BY89 1806 aa13.45□□□□□ -0.26
SYNE3-204ENST00000555759 FAM236DA0A1B0GTK5 79 aa13.45□□□□□ -0.26
SYNE3-204ENST00000555759 FAM236CP0DP71 79 aa13.45□□□□□ -0.26
SYNE3-204ENST00000555759 HIST2H2BDQ6DRA6 164 aa13.45□□□□□ -0.26
SYNE3-204ENST00000555759 WT1P19544 449 aaPredicted RBP13.44□□□□□ -0.26
SYNE3-204ENST00000555759 NDUFA7O95182 113 aa13.44□□□□□ -0.26
SYNE3-204ENST00000555759 J3QLI3 93 aa13.44□□□□□ -0.26
SYNE3-204ENST00000555759 MAPKAPK5-AS1Q8N8E1 139 aa13.44□□□□□ -0.26
SYNE3-204ENST00000555759 ZNF80P51504 273 aaPredicted RBP13.43□□□□□ -0.26
SYNE3-204ENST00000555759 WFDC9Q8NEX5 89 aa13.43□□□□□ -0.26
SYNE3-204ENST00000555759 LINC00574Q9H8X3 128 aa13.43□□□□□ -0.26
SYNE3-204ENST00000555759 K7EMT4 169 aa13.43□□□□□ -0.26
SYNE3-204ENST00000555759 PROP1O75360 226 aa13.43□□□□□ -0.26
SYNE3-204ENST00000555759 C14orf132Q9NPU4 83 aa13.43□□□□□ -0.26
SYNE3-204ENST00000555759 TICRRQ7Z2Z1 1910 aa13.43□□□□□ -0.26
SYNE3-204ENST00000555759 PLA2G5P39877 138 aa13.42□□□□□ -0.26
SYNE3-204ENST00000555759 NOP10Q9NPE3 64 aaKnown RBP13.42□□□□□ -0.26
SYNE3-204ENST00000555759 CXCL5P42830 114 aa13.42□□□□□ -0.26
SYNE3-204ENST00000555759 ALPK3Q96L96 1907 aa13.41□□□□□ -0.26
SYNE3-204ENST00000555759 Q6Q795 121 aa13.41□□□□□ -0.26
SYNE3-204ENST00000555759 Q8N9W7 124 aa13.41□□□□□ -0.26
SYNE3-204ENST00000555759 TRBV7-3A0A075B6L6 115 aa13.41□□□□□ -0.26
SYNE3-204ENST00000555759 IGHV3-33P01772 117 aa13.41□□□□□ -0.26
SYNE3-204ENST00000555759 MYCNOSP40205 109 aa13.41□□□□□ -0.26
SYNE3-204ENST00000555759 UFSP1Q6NVU6 142 aa13.41□□□□□ -0.26
SYNE3-204ENST00000555759 PSCAO43653 123 aa13.41□□□□□ -0.26
SYNE3-204ENST00000555759 MIR7-3HGQ8N6C7 128 aa13.4□□□□□ -0.26
SYNE3-204ENST00000555759 CGB3P0DN86 165 aa13.4□□□□□ -0.26
SYNE3-204ENST00000555759 CGB7P0DN87 165 aa13.4□□□□□ -0.26
SYNE3-204ENST00000555759 AJUBAQ96IF1 538 aa13.4□□□□□ -0.26
SYNE3-204ENST00000555759 MALRD1Q5VYJ5 2156 aa13.4□□□□□ -0.26
SYNE3-204ENST00000555759 Q8N976 141 aa13.4□□□□□ -0.26
SYNE3-204ENST00000555759 CLUHP3Q96NS8 147 aa13.4□□□□□ -0.26
SYNE3-204ENST00000555759 UPK3BQ9BT76 320 aa13.4□□□□□ -0.26
SYNE3-204ENST00000555759 XGP55808 180 aa13.4□□□□□ -0.27
SYNE3-204ENST00000555759 CLPSL2Q6UWE3 100 aa13.4□□□□□ -0.27
SYNE3-204ENST00000555759 SPTBN2O15020 2390 aa13.39□□□□□ -0.27
SYNE3-204ENST00000555759 C20orf197Q8N268 126 aa13.39□□□□□ -0.27
SYNE3-204ENST00000555759 Q9HAA7 133 aa13.39□□□□□ -0.27
SYNE3-204ENST00000555759 ARHGAP21Q5T5U3 1957 aa13.39□□□□□ -0.27
SYNE3-204ENST00000555759 LRRC75A-AS1Q8N1F1 130 aa13.39□□□□□ -0.27
SYNE3-204ENST00000555759 TMEM223A0PJW6 202 aa13.39□□□□□ -0.27
SYNE3-204ENST00000555759 TRAV23DV6A0A075B6W5 121 aa13.38□□□□□ -0.27
SYNE3-204ENST00000555759 FANCD2OSQ96PS1 177 aa13.38□□□□□ -0.27
SYNE3-204ENST00000555759 CADP27708 2225 aa13.38□□□□□ -0.27
SYNE3-204ENST00000555759 TRIAP1O43715 76 aa13.38□□□□□ -0.27
SYNE3-204ENST00000555759 LINC00310P59036 64 aa13.38□□□□□ -0.27
SYNE3-204ENST00000555759 LY6DQ14210 128 aa13.38□□□□□ -0.27
SYNE3-204ENST00000555759 C16orf74Q96GX8 76 aa13.38□□□□□ -0.27
SYNE3-204ENST00000555759 UBE2DNLQ8IWF7 75 aa13.38□□□□□ -0.27
SYNE3-204ENST00000555759 RMI2Q96E14 147 aa13.38□□□□□ -0.27
SYNE3-204ENST00000555759 APOC4P55056 127 aa13.37□□□□□ -0.27
SYNE3-204ENST00000555759 DOPEY2Q9Y3R5 2298 aa13.37□□□□□ -0.27
SYNE3-204ENST00000555759 PRR30Q53SZ7 412 aaPredicted RBP13.37□□□□□ -0.27
SYNE3-204ENST00000555759 SDIM1Q6ZPB5 146 aa13.37□□□□□ -0.27
SYNE3-204ENST00000555759 MRPS12O15235 138 aaKnown RBP13.37□□□□□ -0.27
SYNE3-204ENST00000555759 NDUFC2-KCTD14E9PQ53 114 aa13.36□□□□□ -0.27
SYNE3-204ENST00000555759 TRBV12-3P01733 135 aa13.36□□□□□ -0.27
SYNE3-204ENST00000555759 SERP2Q8N6R1 65 aa13.36□□□□□ -0.27
SYNE3-204ENST00000555759 NCKAP5O14513 1909 aa13.36□□□□□ -0.27
SYNE3-204ENST00000555759 ZNF106Q9H2Y7 1883 aaKnown RBP13.36□□□□□ -0.27
SYNE3-204ENST00000555759 CCDC179H3BU77 68 aa13.36□□□□□ -0.27
SYNE3-204ENST00000555759 CREBBPQ92793 2442 aa13.36□□□□□ -0.27
SYNE3-204ENST00000555759 IGFL2Q6UWQ7 119 aa13.36□□□□□ -0.27
SYNE3-204ENST00000555759 GNLYP22749 145 aa13.35□□□□□ -0.27
SYNE3-204ENST00000555759 ATP5EP56381 51 aaPredicted RBP13.35□□□□□ -0.27
SYNE3-204ENST00000555759 RNF185Q96GF1 192 aa13.35□□□□□ -0.27
SYNE3-204ENST00000555759 HIGD2BQ4VC39 106 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms