RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CCL4P13236 92 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 WHAMMP3Q1A5X7 153 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 DEFB133Q30KQ1 61 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 C2orf82Q6UX34 121 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 C3orf62Q6ZUJ4 267 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 Q8TAT8 98 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 MALSU1Q96EH3 234 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 APCP25054 2843 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 MAP1AP78559 2803 aaPredicted RBP1.21□□□□□ -2.22
SYNE2-210ENST00000553455 LRBAP50851 2863 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 DOPEY1Q5JWR5 2465 aa1.21□□□□□ -2.22
SYNE2-210ENST00000553455 HIVEP3Q5T1R4 2406 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 TEX15Q9BXT5 2789 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 ADGRG4Q8IZF6 3080 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 PDZD2O15018 2839 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 PTPN13Q12923 2485 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 H3BQF6 201 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 NUPR1O60356 82 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 TNFSF15O95150 251 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 APOA2P02652 100 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 OR10J4P0C629 311 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 SERPINB1P30740 379 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 GNG10P50151 68 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 CRYBA4P53673 196 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 DNAJB13P59910 316 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 GNG11P61952 73 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 DCDP81605 110 aaKnown RBP1.2□□□□□ -2.22
SYNE2-210ENST00000553455 CDK6Q00534 326 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 DR1Q01658 176 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 PRB3Q04118 309 aaPredicted RBP1.2□□□□□ -2.22
SYNE2-210ENST00000553455 MSMO1Q15800 293 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 Q6ZS92 163 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 IFT20Q8IY31 132 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 NUP35Q8NFH5 326 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 OR5D16Q8NGK9 328 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 OR4K15Q8NH41 348 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 LCN9Q8WX39 176 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 PSMF1Q92530 271 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 ANP32BQ92688 251 aaKnown RBP1.2□□□□□ -2.22
SYNE2-210ENST00000553455 RAB37Q96AX2 223 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 CHCHD1Q96BP2 118 aaKnown RBP1.2□□□□□ -2.22
SYNE2-210ENST00000553455 TMEM70Q9BUB7 260 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 ORMDL1Q9P0S3 153 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 UNC79Q9P2D8 2635 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 SPTBN1Q01082 2364 aaKnown RBP1.2□□□□□ -2.22
SYNE2-210ENST00000553455 CMYA5Q8N3K9 4069 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 NAV2Q8IVL1 2488 aa1.2□□□□□ -2.22
SYNE2-210ENST00000553455 MAST4O15021 2626 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 ESPL1Q14674 2120 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 NIPBLQ6KC79 2804 aaeCLIP1.19□□□□□ -2.22
SYNE2-210ENST00000553455 ODAMA1E959 279 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 E7EQ34 232 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 H0YGG7 62 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 K7ERJ3 54 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 M0R233 179 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 CCL22O00626 93 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 DNAL4O96015 105 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 IFNA14P01570 189 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 CMPK1P30085 196 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 GLRXP35754 106 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 PSPHP78330 225 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 LTC4SQ16873 150 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 CCSMST1Q4G0I0 132 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 NUP210LQ5VU65 1888 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 MORN4Q8NDC4 146 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 PLEKHB2Q96CS7 222 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 ZNF714Q96N38 554 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 EFCAB11Q9BUY7 163 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 GGACTQ9BVM4 153 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 CACYBPQ9HB71 228 aaKnown RBP1.19□□□□□ -2.22
SYNE2-210ENST00000553455 IL20Q9NYY1 176 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 ZGRF1Q86YA3 2104 aa1.19□□□□□ -2.22
SYNE2-210ENST00000553455 ANK3Q12955 4377 aaKnown RBP1.19□□□□□ -2.22
SYNE2-210ENST00000553455 PCNX1Q96RV3 2341 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 MYO7BQ6PIF6 2116 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 SVEP1Q4LDE5 3571 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 DNAJC13O75165 2243 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 ANK2Q01484 3957 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 E5RI56 91 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 ERC2-IT1O76042 136 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 RAB5CP51148 216 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 CCDC153Q494R4 210 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 C1orf140Q5VVS0 124 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 LINC00322Q6ZN03 302 aaPredicted RBP1.18□□□□□ -2.22
SYNE2-210ENST00000553455 GRINAQ7Z429 371 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 CROCCP2Q86T23 111 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 NEK7Q8TDX7 302 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 NAT14Q8WUY8 206 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 CARD19Q96LW7 228 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 SELENOSQ9BQE4 189 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 AIF1LQ9BQI0 150 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 RNF11Q9Y3C5 154 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 NINQ8N4C6 2090 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 OTOGQ6ZRI0 2925 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 HECTD1Q9ULT8 2610 aa1.18□□□□□ -2.22
SYNE2-210ENST00000553455 CSMD2Q7Z408 3487 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 IGLV3-32A0A0A0MS00 114 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 TRAV5A0A0B4J249 113 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 TRAV17A0A0B4J275 112 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 SMIM24O75264 130 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms