RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 NIT1Q86X76 327 aa7.56□□□□□ -1.2
PRPF40B-212ENST00000551111 KLK12Q9UKR0 248 aa7.56□□□□□ -1.2
PRPF40B-212ENST00000551111 TMSB15BA0A087X1C1 80 aa7.55□□□□□ -1.2
PRPF40B-212ENST00000551111 MBP02144 154 aa7.55□□□□□ -1.2
PRPF40B-212ENST00000551111 PIK3CD-AS1Q5SR53 167 aa7.55□□□□□ -1.2
PRPF40B-212ENST00000551111 IGKV2D-24A0A075B6R9 120 aa7.54□□□□□ -1.2
PRPF40B-212ENST00000551111 CTXND1A0A1B0GTU2 59 aa7.54□□□□□ -1.2
PRPF40B-212ENST00000551111 KRTAP29-1A8MX34 341 aaPredicted RBP7.54□□□□□ -1.2
PRPF40B-212ENST00000551111 DNLZQ5SXM8 178 aa7.54□□□□□ -1.2
PRPF40B-212ENST00000551111 SFRP2Q96HF1 295 aa7.54□□□□□ -1.2
PRPF40B-212ENST00000551111 MED28Q9H204 178 aa7.54□□□□□ -1.2
PRPF40B-212ENST00000551111 HMCN2Q8NDA2 5059 aa7.53□□□□□ -1.2
PRPF40B-212ENST00000551111 RBFOX3A6NFN3 312 aa7.53□□□□□ -1.2
PRPF40B-212ENST00000551111 G3V3Q6 166 aa7.53□□□□□ -1.2
PRPF40B-212ENST00000551111 M0R381 172 aa7.53□□□□□ -1.2
PRPF40B-212ENST00000551111 PLA2G1BP04054 148 aaKnown RBP7.53□□□□□ -1.2
PRPF40B-212ENST00000551111 CIRBP-AS1Q8TBR5 109 aa7.53□□□□□ -1.2
PRPF40B-212ENST00000551111 UBE2WQ96B02 151 aa7.53□□□□□ -1.2
PRPF40B-212ENST00000551111 UBR4Q5T4S7 5183 aa7.52□□□□□ -1.2
PRPF40B-212ENST00000551111 A0A087WWC5 75 aa7.52□□□□□ -1.21
PRPF40B-212ENST00000551111 FXYD6-FXYD2A0A087WZ82 144 aa7.52□□□□□ -1.21
PRPF40B-212ENST00000551111 FHITP49789 147 aa7.52□□□□□ -1.21
PRPF40B-212ENST00000551111 ZNF674Q2M3X9 581 aa7.52□□□□□ -1.21
PRPF40B-212ENST00000551111 COX8CQ7Z4L0 72 aa7.52□□□□□ -1.21
PRPF40B-212ENST00000551111 OR11H4Q8NGC9 324 aa7.52□□□□□ -1.21
PRPF40B-212ENST00000551111 CHAC1Q9BUX1 264 aa7.52□□□□□ -1.21
PRPF40B-212ENST00000551111 GIPP09681 153 aaPredicted RBP7.51□□□□□ -1.21
PRPF40B-212ENST00000551111 UBE2D3P61077 147 aa7.51□□□□□ -1.21
PRPF40B-212ENST00000551111 UBE2D2P62837 147 aa7.51□□□□□ -1.21
PRPF40B-212ENST00000551111 RPL19P84098 196 aaKnown RBP7.51□□□□□ -1.21
PRPF40B-212ENST00000551111 FAM162BQ5T6X4 162 aa7.51□□□□□ -1.21
PRPF40B-212ENST00000551111 ENHOQ6UWT2 76 aa7.51□□□□□ -1.21
PRPF40B-212ENST00000551111 Q8N976 141 aa7.51□□□□□ -1.21
PRPF40B-212ENST00000551111 DEFB104AQ8WTQ1 72 aa7.51□□□□□ -1.21
PRPF40B-212ENST00000551111 HIST1H2BAQ96A08 127 aa7.51□□□□□ -1.21
PRPF40B-212ENST00000551111 CYTL1Q9NRR1 136 aa7.51□□□□□ -1.21
PRPF40B-212ENST00000551111 PHLDA3Q9Y5J5 127 aa7.51□□□□□ -1.21
PRPF40B-212ENST00000551111 MUC21A0A0G2JKD1 596 aa7.5□□□□□ -1.21
PRPF40B-212ENST00000551111 MUC21A0A140T8X8 626 aa7.5□□□□□ -1.21
PRPF40B-212ENST00000551111 MAP1LC3B2A6NCE7 125 aa7.5□□□□□ -1.21
PRPF40B-212ENST00000551111 RHODO00212 210 aa7.5□□□□□ -1.21
PRPF40B-212ENST00000551111 TOR2AQ5JU69 321 aa7.5□□□□□ -1.21
PRPF40B-212ENST00000551111 ATRAIDQ6UW56 229 aa7.5□□□□□ -1.21
PRPF40B-212ENST00000551111 SYT8Q8NBV8 401 aa7.5□□□□□ -1.21
PRPF40B-212ENST00000551111 INO80EQ8NBZ0 244 aaPredicted RBP7.5□□□□□ -1.21
PRPF40B-212ENST00000551111 MAP1LC3BQ9GZQ8 125 aa7.5□□□□□ -1.21
PRPF40B-212ENST00000551111 ZFP30Q9Y2G7 519 aa7.5□□□□□ -1.21
PRPF40B-212ENST00000551111 URGCP-MRPS24S4R325 110 aa7.5□□□□□ -1.21
PRPF40B-212ENST00000551111 A0A087WX48 190 aa7.49□□□□□ -1.21
PRPF40B-212ENST00000551111 BORCS7-ASMTA0A0B4J1R7 106 aa7.49□□□□□ -1.21
PRPF40B-212ENST00000551111 LTAP01374 205 aa7.49□□□□□ -1.21
PRPF40B-212ENST00000551111 TPT1P13693 172 aaKnown RBP7.49□□□□□ -1.21
PRPF40B-212ENST00000551111 HNRNPA3P51991 378 aaKnown RBP7.49□□□□□ -1.21
PRPF40B-212ENST00000551111 MPV17L2Q567V2 206 aa7.49□□□□□ -1.21
PRPF40B-212ENST00000551111 NEXN-AS1Q8NBZ9 246 aa7.49□□□□□ -1.21
PRPF40B-212ENST00000551111 OR10AG1Q8NH19 301 aa7.49□□□□□ -1.21
PRPF40B-212ENST00000551111 COX11Q9Y6N1 276 aa7.49□□□□□ -1.21
PRPF40B-212ENST00000551111 TRBV7-3A0A075B6L6 115 aa7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 TMEM262E9PQX1 116 aa7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 SMLR1H3BR10 107 aa7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 PTTG1O95997 202 aa7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 IGLV2-8P01709 118 aa7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 SSTP61278 116 aa7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 UBE2G1P62253 170 aa7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 RPL36AP83881 106 aaKnown RBP7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 AKR1C8PQ5T2L2 129 aa7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 CST9LP1Q5W188 147 aa7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 NTM-AS1Q6ZSK4 140 aa7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 C15orf54Q8N8G6 183 aa7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 RPL36ALQ969Q0 106 aaKnown RBP7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 RMI2Q96E14 147 aa7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 FMC1Q96HJ9 113 aa7.48□□□□□ -1.21
PRPF40B-212ENST00000551111 TRBV6-8A0A0A6YYG3 113 aa7.47□□□□□ -1.21
PRPF40B-212ENST00000551111 TRBV10-1A0A0K0K1A3 114 aa7.47□□□□□ -1.21
PRPF40B-212ENST00000551111 TRBV6-1A0A0K0K1D8 114 aa7.47□□□□□ -1.21
PRPF40B-212ENST00000551111 A0A1B0GV50 99 aa7.47□□□□□ -1.21
PRPF40B-212ENST00000551111 PANO1I0J062 215 aa7.47□□□□□ -1.21
PRPF40B-212ENST00000551111 PAGE4O60829 102 aa7.47□□□□□ -1.21
PRPF40B-212ENST00000551111 PRR27Q6MZM9 219 aa7.47□□□□□ -1.21
PRPF40B-212ENST00000551111 ZFP82Q8N141 532 aa7.47□□□□□ -1.21
PRPF40B-212ENST00000551111 OR10G8Q8NGN5 311 aa7.47□□□□□ -1.21
PRPF40B-212ENST00000551111 NKX6-2Q9C056 277 aaPredicted RBP7.47□□□□□ -1.21
PRPF40B-212ENST00000551111 SCO2A0A1W2PP80 73 aa7.46□□□□□ -1.22
PRPF40B-212ENST00000551111 PRSS1P07477 247 aa7.46□□□□□ -1.22
PRPF40B-212ENST00000551111 KRTAP26-1Q6PEX3 210 aa7.46□□□□□ -1.22
PRPF40B-212ENST00000551111 CLPSL2Q6UWE3 100 aa7.46□□□□□ -1.22
PRPF40B-212ENST00000551111 DAZAP1Q96EP5 407 aaKnown RBP7.46□□□□□ -1.22
PRPF40B-212ENST00000551111 USP17L23D6RBM5 183 aa7.45□□□□□ -1.22
PRPF40B-212ENST00000551111 ARPC5O15511 151 aa7.45□□□□□ -1.22
PRPF40B-212ENST00000551111 ANGP03950 147 aaKnown RBP7.45□□□□□ -1.22
PRPF40B-212ENST00000551111 AKR1C3P42330 323 aa7.45□□□□□ -1.22
PRPF40B-212ENST00000551111 RAB4BP61018 213 aa7.45□□□□□ -1.22
PRPF40B-212ENST00000551111 ZNF56Q15929 161 aa7.45□□□□□ -1.22
PRPF40B-212ENST00000551111 CHCHD7Q9BUK0 85 aa7.45□□□□□ -1.22
PRPF40B-212ENST00000551111 MLST8Q9BVC4 326 aa7.45□□□□□ -1.22
PRPF40B-212ENST00000551111 C1orf43Q9BWL3 253 aa7.45□□□□□ -1.22
PRPF40B-212ENST00000551111 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.45□□□□□ -1.22
PRPF40B-212ENST00000551111 HLA-DQA1P01909 254 aa7.44□□□□□ -1.22
PRPF40B-212ENST00000551111 Q0VG73 95 aa7.44□□□□□ -1.22
PRPF40B-212ENST00000551111 ELOBQ15370 118 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms