RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 Q6ZSN1 163 aa9.46□□□□□ -0.9
LTBR-213ENST00000544454 FAM231DQ6ZW35 169 aa9.46□□□□□ -0.9
LTBR-213ENST00000544454 FER1L6-AS1Q8NA97 138 aa9.46□□□□□ -0.9
LTBR-213ENST00000544454 UPK3BQ9BT76 320 aa9.46□□□□□ -0.9
LTBR-213ENST00000544454 RNASE7Q9H1E1 156 aaKnown RBP9.46□□□□□ -0.9
LTBR-213ENST00000544454 RPP21Q9H633 154 aaKnown RBP9.46□□□□□ -0.9
LTBR-213ENST00000544454 MRPS16Q9Y3D3 137 aaKnown RBP9.46□□□□□ -0.9
LTBR-213ENST00000544454 DNAH2Q9P225 4427 aa9.45□□□□□ -0.9
LTBR-213ENST00000544454 A0A087WWL8 130 aa9.45□□□□□ -0.9
LTBR-213ENST00000544454 SRSF3P84103 164 aaKnown RBP9.45□□□□□ -0.9
LTBR-213ENST00000544454 TMEM241Q24JQ0 296 aa9.45□□□□□ -0.9
LTBR-213ENST00000544454 LINC01551Q86U37 167 aa9.45□□□□□ -0.9
LTBR-213ENST00000544454 TPPP3Q9BW30 176 aa9.45□□□□□ -0.9
LTBR-213ENST00000544454 IGLV2-18A0A075B6J9 118 aa9.44□□□□□ -0.9
LTBR-213ENST00000544454 MUC21A0A0G2JKD1 596 aa9.44□□□□□ -0.9
LTBR-213ENST00000544454 LOC100131303A0A0U1RQF7 123 aa9.44□□□□□ -0.9
LTBR-213ENST00000544454 MUC21A0A140T8X8 626 aa9.44□□□□□ -0.9
LTBR-213ENST00000544454 ERVFC1-1P60608 527 aa9.44□□□□□ -0.9
LTBR-213ENST00000544454 CACNG7P62955 275 aa9.44□□□□□ -0.9
LTBR-213ENST00000544454 FAM74A4Q5TZK3 123 aa9.44□□□□□ -0.9
LTBR-213ENST00000544454 WDR73Q6P4I2 378 aa9.44□□□□□ -0.9
LTBR-213ENST00000544454 Q9H8V8 135 aa9.44□□□□□ -0.9
LTBR-213ENST00000544454 DNAH10Q8IVF4 4471 aa9.43□□□□□ -0.9
LTBR-213ENST00000544454 GATCO43716 136 aaKnown RBP9.43□□□□□ -0.9
LTBR-213ENST00000544454 TIRAPP58753 221 aa9.43□□□□□ -0.9
LTBR-213ENST00000544454 SSTP61278 116 aa9.43□□□□□ -0.9
LTBR-213ENST00000544454 CLLU1Q5K131 121 aa9.43□□□□□ -0.9
LTBR-213ENST00000544454 Q6ZR54 194 aa9.43□□□□□ -0.9
LTBR-213ENST00000544454 A8MWL6 223 aa9.42□□□□□ -0.9
LTBR-213ENST00000544454 M0R2N4 97 aa9.42□□□□□ -0.9
LTBR-213ENST00000544454 RAB4BP61018 213 aa9.42□□□□□ -0.9
LTBR-213ENST00000544454 IFITM2Q01629 132 aa9.42□□□□□ -0.9
LTBR-213ENST00000544454 CT83Q5H943 113 aa9.42□□□□□ -0.9
LTBR-213ENST00000544454 SOHLH1Q5JUK2 328 aa9.42□□□□□ -0.9
LTBR-213ENST00000544454 LYZL1Q6UWQ5 148 aa9.42□□□□□ -0.9
LTBR-213ENST00000544454 C14orf178Q8N769 122 aaPredicted RBP9.42□□□□□ -0.9
LTBR-213ENST00000544454 OSTCQ9NRP0 149 aa9.42□□□□□ -0.9
LTBR-213ENST00000544454 TRBV10-1A0A0K0K1A3 114 aa9.41□□□□□ -0.9
LTBR-213ENST00000544454 NBDYA0A0U1RRE5 68 aa9.41□□□□□ -0.9
LTBR-213ENST00000544454 SMIM17P0DL12 118 aa9.41□□□□□ -0.9
LTBR-213ENST00000544454 CTRLP40313 264 aa9.41□□□□□ -0.9
LTBR-213ENST00000544454 FOXA3P55318 350 aaPredicted RBP9.41□□□□□ -0.9
LTBR-213ENST00000544454 AP1S3Q96PC3 154 aa9.41□□□□□ -0.9
LTBR-213ENST00000544454 CNFNQ9BYD5 112 aa9.41□□□□□ -0.9
LTBR-213ENST00000544454 NAT8Q9UHE5 227 aa9.41□□□□□ -0.9
LTBR-213ENST00000544454 KIF25-AS1Q9Y6Z4 181 aa9.41□□□□□ -0.9
LTBR-213ENST00000544454 NACAE9PAV3 2078 aa9.4□□□□□ -0.9
LTBR-213ENST00000544454 NTF3P20783 257 aa9.4□□□□□ -0.9
LTBR-213ENST00000544454 RPL23P62829 140 aaKnown RBP9.4□□□□□ -0.9
LTBR-213ENST00000544454 C15orf54Q8N8G6 183 aa9.4□□□□□ -0.9
LTBR-213ENST00000544454 ATP6V0E2Q8NHE4 81 aa9.4□□□□□ -0.9
LTBR-213ENST00000544454 GTSF1Q8WW33 167 aa9.4□□□□□ -0.9
LTBR-213ENST00000544454 MSRB1Q9NZV6 116 aa9.4□□□□□ -0.9
LTBR-213ENST00000544454 Q9UF83 564 aa9.4□□□□□ -0.9
LTBR-213ENST00000544454 GAGE12JA6NER3 117 aa9.39□□□□□ -0.91
LTBR-213ENST00000544454 SIVA1O15304 175 aa9.39□□□□□ -0.91
LTBR-213ENST00000544454 LINC00315P59091 139 aa9.39□□□□□ -0.91
LTBR-213ENST00000544454 GAGE1Q13065 139 aa9.39□□□□□ -0.91
LTBR-213ENST00000544454 GAGE4Q13068 117 aa9.39□□□□□ -0.91
LTBR-213ENST00000544454 GAGE5Q13069 117 aa9.39□□□□□ -0.91
LTBR-213ENST00000544454 GAGE13Q4V321 117 aa9.39□□□□□ -0.91
LTBR-213ENST00000544454 ISOC2Q96AB3 205 aa9.39□□□□□ -0.91
LTBR-213ENST00000544454 GTSF1LQ9H1H1 148 aa9.39□□□□□ -0.91
LTBR-213ENST00000544454 FAM231BA6NCW3 169 aa9.38□□□□□ -0.91
LTBR-213ENST00000544454 F5H697 171 aa9.38□□□□□ -0.91
LTBR-213ENST00000544454 TRGC1P0CF51 173 aa9.38□□□□□ -0.91
LTBR-213ENST00000544454 LINC00694P0DN24 101 aa9.38□□□□□ -0.91
LTBR-213ENST00000544454 TWIST1Q15672 202 aa9.38□□□□□ -0.91
LTBR-213ENST00000544454 ADIRFQ15847 76 aa9.38□□□□□ -0.91
LTBR-213ENST00000544454 ZNF56Q15929 161 aa9.38□□□□□ -0.91
LTBR-213ENST00000544454 TTC32Q5I0X7 151 aa9.38□□□□□ -0.91
LTBR-213ENST00000544454 TSKUQ8WUA8 353 aa9.38□□□□□ -0.91
LTBR-213ENST00000544454 GFRA4Q9GZZ7 299 aa9.38□□□□□ -0.91
LTBR-213ENST00000544454 TRBV7-3A0A075B6L6 115 aa9.37□□□□□ -0.91
LTBR-213ENST00000544454 EVI2AP22794 236 aa9.37□□□□□ -0.91
LTBR-213ENST00000544454 RPL36AP83881 106 aaKnown RBP9.37□□□□□ -0.91
LTBR-213ENST00000544454 OR10G8Q8NGN5 311 aa9.37□□□□□ -0.91
LTBR-213ENST00000544454 RPL36ALQ969Q0 106 aaKnown RBP9.37□□□□□ -0.91
LTBR-213ENST00000544454 V9GYV3 84 aa9.37□□□□□ -0.91
LTBR-213ENST00000544454 TRAV8-6A0A0B4J262 113 aa9.36□□□□□ -0.91
LTBR-213ENST00000544454 K7EP13 123 aa9.36□□□□□ -0.91
LTBR-213ENST00000544454 BTF3P20290 206 aaKnown RBP9.36□□□□□ -0.91
LTBR-213ENST00000544454 LELP1Q5T871 98 aa9.36□□□□□ -0.91
LTBR-213ENST00000544454 C1orf134Q5TEV5 83 aa9.36□□□□□ -0.91
LTBR-213ENST00000544454 PGLYRP4Q96LB8 373 aa9.36□□□□□ -0.91
LTBR-213ENST00000544454 DNAH17Q9UFH2 4485 aa9.36□□□□□ -0.91
LTBR-213ENST00000544454 TRAV9-2A0A087WT02 112 aa9.35□□□□□ -0.91
LTBR-213ENST00000544454 A0A087WWC5 75 aa9.35□□□□□ -0.91
LTBR-213ENST00000544454 DNAH10OSP0CZ25 163 aa9.35□□□□□ -0.91
LTBR-213ENST00000544454 LINC00336Q6ZUF6 198 aa9.35□□□□□ -0.91
LTBR-213ENST00000544454 BORCS7Q96B45 105 aa9.35□□□□□ -0.91
LTBR-213ENST00000544454 DPH3P1Q9H4G8 78 aa9.35□□□□□ -0.91
LTBR-213ENST00000544454 FRAS1Q86XX4 4008 aa9.34□□□□□ -0.91
LTBR-213ENST00000544454 EPPK1P58107 5090 aaKnown RBP9.34□□□□□ -0.91
LTBR-213ENST00000544454 HIGD1CA8MV81 97 aa9.34□□□□□ -0.91
LTBR-213ENST00000544454 H7C1H1 209 aa9.34□□□□□ -0.91
LTBR-213ENST00000544454 M0QY20 66 aa9.34□□□□□ -0.91
LTBR-213ENST00000544454 RTL8CO15255 209 aa9.34□□□□□ -0.91
LTBR-213ENST00000544454 UBE2D3P61077 147 aa9.34□□□□□ -0.91
LTBR-213ENST00000544454 UBE2D2P62837 147 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms