RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 SH2D1AO60880 128 aa18.1■□□□□ 0.49
PDCD2-211ENST00000544336 IGKV2D-24A0A075B6R9 120 aa18.09■□□□□ 0.49
PDCD2-211ENST00000544336 FXYD6-FXYD2A0A087WZ82 144 aa18.09■□□□□ 0.49
PDCD2-211ENST00000544336 RNF222A6NCQ9 220 aa18.09■□□□□ 0.49
PDCD2-211ENST00000544336 FAM74A7A6NL05 159 aa18.09■□□□□ 0.49
PDCD2-211ENST00000544336 RMI2Q96E14 147 aa18.09■□□□□ 0.49
PDCD2-211ENST00000544336 COX11Q9Y6N1 276 aa18.09■□□□□ 0.49
PDCD2-211ENST00000544336 TMSB15BA0A087X1C1 80 aa18.08■□□□□ 0.48
PDCD2-211ENST00000544336 NIT1Q86X76 327 aa18.08■□□□□ 0.48
PDCD2-211ENST00000544336 HIST1H2BAQ96A08 127 aa18.08■□□□□ 0.48
PDCD2-211ENST00000544336 KLK12Q9UKR0 248 aa18.08■□□□□ 0.48
PDCD2-211ENST00000544336 RBFOX3A6NFN3 312 aa18.07■□□□□ 0.48
PDCD2-211ENST00000544336 GIPP09681 153 aaPredicted RBP18.07■□□□□ 0.48
PDCD2-211ENST00000544336 DNLZQ5SXM8 178 aa18.07■□□□□ 0.48
PDCD2-211ENST00000544336 PHLDA3Q9Y5J5 127 aa18.07■□□□□ 0.48
PDCD2-211ENST00000544336 M0R381 172 aa18.06■□□□□ 0.48
PDCD2-211ENST00000544336 FAM162BQ5T6X4 162 aa18.06■□□□□ 0.48
PDCD2-211ENST00000544336 PTTG1O95997 202 aa18.05■□□□□ 0.48
PDCD2-211ENST00000544336 TPT1P13693 172 aaKnown RBP18.05■□□□□ 0.48
PDCD2-211ENST00000544336 UBE2G1P62253 170 aa18.05■□□□□ 0.48
PDCD2-211ENST00000544336 AKR1C8PQ5T2L2 129 aa18.05■□□□□ 0.48
PDCD2-211ENST00000544336 SCXQ7RTU7 201 aa18.05■□□□□ 0.48
PDCD2-211ENST00000544336 UBE2WQ96B02 151 aa18.05■□□□□ 0.48
PDCD2-211ENST00000544336 SFRP2Q96HF1 295 aa18.05■□□□□ 0.48
PDCD2-211ENST00000544336 NKX6-2Q9C056 277 aaPredicted RBP18.05■□□□□ 0.48
PDCD2-211ENST00000544336 Q8N976 141 aa18.04■□□□□ 0.48
PDCD2-211ENST00000544336 ZFP30Q9Y2G7 519 aa18.04■□□□□ 0.48
PDCD2-211ENST00000544336 A0A087WX48 190 aa18.03■□□□□ 0.48
PDCD2-211ENST00000544336 FMC1Q96HJ9 113 aa18.03■□□□□ 0.48
PDCD2-211ENST00000544336 MAP1LC3B2A6NCE7 125 aa18.02■□□□□ 0.48
PDCD2-211ENST00000544336 SEC11BP0C7V7 166 aa18.02■□□□□ 0.48
PDCD2-211ENST00000544336 MAP1LC3BQ9GZQ8 125 aa18.02■□□□□ 0.48
PDCD2-211ENST00000544336 KCNIP4Q6PIL6 250 aa18.01■□□□□ 0.47
PDCD2-211ENST00000544336 COX8CQ7Z4L0 72 aa18.01■□□□□ 0.47
PDCD2-211ENST00000544336 RPL36AP83881 106 aaKnown RBP18■□□□□ 0.47
PDCD2-211ENST00000544336 ZNF674Q2M3X9 581 aa18■□□□□ 0.47
PDCD2-211ENST00000544336 LINC01559Q495D7 138 aa18■□□□□ 0.47
PDCD2-211ENST00000544336 ZFP82Q8N141 532 aa18■□□□□ 0.47
PDCD2-211ENST00000544336 DEFB104AQ8WTQ1 72 aa18■□□□□ 0.47
PDCD2-211ENST00000544336 RPL36ALQ969Q0 106 aaKnown RBP18■□□□□ 0.47
PDCD2-211ENST00000544336 CST9LP1Q5W188 147 aa17.99■□□□□ 0.47
PDCD2-211ENST00000544336 ELOBQ15370 118 aa17.98■□□□□ 0.47
PDCD2-211ENST00000544336 TRBV10-1A0A0K0K1A3 114 aa17.97■□□□□ 0.47
PDCD2-211ENST00000544336 KRTAP29-1A8MX34 341 aaPredicted RBP17.97■□□□□ 0.47
PDCD2-211ENST00000544336 LTAP01374 205 aa17.97■□□□□ 0.47
PDCD2-211ENST00000544336 UBE2D3P61077 147 aa17.97■□□□□ 0.47
PDCD2-211ENST00000544336 UBE2D2P62837 147 aa17.97■□□□□ 0.47
PDCD2-211ENST00000544336 CHCHD7Q9BUK0 85 aa17.97■□□□□ 0.47
PDCD2-211ENST00000544336 TMEM262E9PQX1 116 aa17.96■□□□□ 0.47
PDCD2-211ENST00000544336 AKR1C3P42330 323 aa17.96■□□□□ 0.47
PDCD2-211ENST00000544336 CHAC1Q9BUX1 264 aa17.96■□□□□ 0.47
PDCD2-211ENST00000544336 TRBV7-3A0A075B6L6 115 aa17.95■□□□□ 0.46
PDCD2-211ENST00000544336 TRBV6-1A0A0K0K1D8 114 aa17.94■□□□□ 0.46
PDCD2-211ENST00000544336 STOML3Q8TAV4 291 aa17.94■□□□□ 0.46
PDCD2-211ENST00000544336 CIRBP-AS1Q8TBR5 109 aa17.94■□□□□ 0.46
PDCD2-211ENST00000544336 Q0VG73 95 aa17.93■□□□□ 0.46
PDCD2-211ENST00000544336 ZNF56Q15929 161 aa17.93■□□□□ 0.46
PDCD2-211ENST00000544336 ATRAIDQ6UW56 229 aa17.93■□□□□ 0.46
PDCD2-211ENST00000544336 C1orf43Q9BWL3 253 aa17.93■□□□□ 0.46
PDCD2-211ENST00000544336 CYTL1Q9NRR1 136 aa17.93■□□□□ 0.46
PDCD2-211ENST00000544336 ARPC5O15511 151 aa17.92■□□□□ 0.46
PDCD2-211ENST00000544336 FHITP49789 147 aa17.92■□□□□ 0.46
PDCD2-211ENST00000544336 RPL19P84098 196 aaKnown RBP17.92■□□□□ 0.46
PDCD2-211ENST00000544336 C15orf54Q8N8G6 183 aa17.92■□□□□ 0.46
PDCD2-211ENST00000544336 G3V3Q6 166 aa17.91■□□□□ 0.46
PDCD2-211ENST00000544336 CRPP02741 224 aa17.91■□□□□ 0.46
PDCD2-211ENST00000544336 OR10AG1Q8NH19 301 aa17.91■□□□□ 0.46
PDCD2-211ENST00000544336 TCEAL7Q9BRU2 100 aa17.91■□□□□ 0.46
PDCD2-211ENST00000544336 TRBV6-8A0A0A6YYG3 113 aa17.9■□□□□ 0.46
PDCD2-211ENST00000544336 PAGE4O60829 102 aa17.9■□□□□ 0.46
PDCD2-211ENST00000544336 RAB4BP61018 213 aa17.9■□□□□ 0.46
PDCD2-211ENST00000544336 ENHOQ6UWT2 76 aa17.9■□□□□ 0.46
PDCD2-211ENST00000544336 NEXN-AS1Q8NBZ9 246 aa17.9■□□□□ 0.46
PDCD2-211ENST00000544336 OR10G8Q8NGN5 311 aa17.9■□□□□ 0.46
PDCD2-211ENST00000544336 MUC21A0A0G2JKD1 596 aa17.89■□□□□ 0.45
PDCD2-211ENST00000544336 MUC21A0A140T8X8 626 aa17.89■□□□□ 0.45
PDCD2-211ENST00000544336 MPV17L2Q567V2 206 aa17.89■□□□□ 0.45
PDCD2-211ENST00000544336 BATF3Q9NR55 127 aa17.89■□□□□ 0.45
PDCD2-211ENST00000544336 A0A1B0GV50 99 aa17.88■□□□□ 0.45
PDCD2-211ENST00000544336 ANGP03950 147 aaKnown RBP17.88■□□□□ 0.45
PDCD2-211ENST00000544336 KRTAP10-4P60372 401 aaPredicted RBP17.88■□□□□ 0.45
PDCD2-211ENST00000544336 C14orf177Q52M58 125 aa17.88■□□□□ 0.45
PDCD2-211ENST00000544336 SSTP61278 116 aa17.87■□□□□ 0.45
PDCD2-211ENST00000544336 CHCHD5Q9BSY4 110 aa17.87■□□□□ 0.45
PDCD2-211ENST00000544336 ZNF471Q9BX82 626 aaPredicted RBP17.87■□□□□ 0.45
PDCD2-211ENST00000544336 HLA-DQA1P01909 254 aa17.86■□□□□ 0.45
PDCD2-211ENST00000544336 LRP1Q07954 4544 aaKnown RBP17.85■□□□□ 0.45
PDCD2-211ENST00000544336 SCO2A0A1W2PP80 73 aa17.85■□□□□ 0.45
PDCD2-211ENST00000544336 F5H697 171 aa17.85■□□□□ 0.45
PDCD2-211ENST00000544336 SMLR1H3BR10 107 aa17.84■□□□□ 0.45
PDCD2-211ENST00000544336 PRR27Q6MZM9 219 aa17.84■□□□□ 0.45
PDCD2-211ENST00000544336 SFT2D1Q8WV19 159 aa17.84■□□□□ 0.45
PDCD2-211ENST00000544336 USP17L23D6RBM5 183 aa17.83■□□□□ 0.44
PDCD2-211ENST00000544336 IGLV2-8P01709 118 aa17.83■□□□□ 0.44
PDCD2-211ENST00000544336 SPANXN1Q5VSR9 72 aa17.83■□□□□ 0.44
PDCD2-211ENST00000544336 BAGE2Q86Y30 109 aa17.83■□□□□ 0.44
PDCD2-211ENST00000544336 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.83■□□□□ 0.44
PDCD2-211ENST00000544336 FAM213BQ8TBF2 198 aa17.83■□□□□ 0.44
PDCD2-211ENST00000544336 S100A9P06702 114 aaKnown RBP17.81■□□□□ 0.44
PDCD2-211ENST00000544336 CXCL1P09341 107 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms