RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
VPS13D-212ENST00000543766 ACYP1P07311 99 aa6.74□□□□□ -1.33
VPS13D-212ENST00000543766 C6orf99Q4VX62 202 aa6.74□□□□□ -1.33
VPS13D-212ENST00000543766 HBDP02042 147 aa6.73□□□□□ -1.33
VPS13D-212ENST00000543766 PRB2P02812 416 aaPredicted RBP6.73□□□□□ -1.33
VPS13D-212ENST00000543766 ARL14EPLP0DKL9 152 aa6.73□□□□□ -1.33
VPS13D-212ENST00000543766 COX6CP09669 75 aa6.73□□□□□ -1.33
VPS13D-212ENST00000543766 UBE2BP63146 152 aa6.73□□□□□ -1.33
VPS13D-212ENST00000543766 LCA10Q71F78 164 aa6.73□□□□□ -1.33
VPS13D-212ENST00000543766 EPG5Q9HCE0 2579 aa6.72□□□□□ -1.33
VPS13D-212ENST00000543766 TRBV10-2A0A0K0K1G8 114 aa6.72□□□□□ -1.33
VPS13D-212ENST00000543766 MAPKAPK5-AS1Q8N8E1 139 aa6.72□□□□□ -1.33
VPS13D-212ENST00000543766 DAND5Q8N907 189 aa6.72□□□□□ -1.33
VPS13D-212ENST00000543766 PLA2G2DQ9UNK4 145 aa6.72□□□□□ -1.33
VPS13D-212ENST00000543766 PTPRBP23467 1997 aa6.72□□□□□ -1.33
VPS13D-212ENST00000543766 CFAP47Q6ZTR5 3102 aa6.72□□□□□ -1.33
VPS13D-212ENST00000543766 TET2Q6N021 2002 aaPredicted RBP6.72□□□□□ -1.33
VPS13D-212ENST00000543766 IGHV4-34P06331 123 aa6.72□□□□□ -1.33
VPS13D-212ENST00000543766 EIF4EBP1Q13541 118 aaPredicted RBP6.72□□□□□ -1.33
VPS13D-212ENST00000543766 FAM168AQ92567 244 aa6.72□□□□□ -1.33
VPS13D-212ENST00000543766 PRO1854Q9UHT4 67 aa6.72□□□□□ -1.33
VPS13D-212ENST00000543766 C5orf38Q86SI9 138 aa6.72□□□□□ -1.33
VPS13D-212ENST00000543766 AHCTF1Q8WYP5 2266 aa6.71□□□□□ -1.33
VPS13D-212ENST00000543766 TRAV40A0A0B4J280 105 aa6.71□□□□□ -1.33
VPS13D-212ENST00000543766 C19orf71A6NCJ1 209 aa6.71□□□□□ -1.33
VPS13D-212ENST00000543766 ZNF329Q86UD4 541 aa6.71□□□□□ -1.33
VPS13D-212ENST00000543766 CCL4L1Q8NHW4 92 aa6.71□□□□□ -1.33
VPS13D-212ENST00000543766 TRBV7-1A0A0A6YYK4 115 aa6.71□□□□□ -1.34
VPS13D-212ENST00000543766 P0DMU3 169 aa6.71□□□□□ -1.34
VPS13D-212ENST00000543766 FAM231AP0DMU4 169 aa6.71□□□□□ -1.34
VPS13D-212ENST00000543766 FAM231CP0DMU5 169 aa6.71□□□□□ -1.34
VPS13D-212ENST00000543766 PRSS33Q8NF86 280 aa6.71□□□□□ -1.34
VPS13D-212ENST00000543766 ZNF815PA8K554 130 aa6.71□□□□□ -1.34
VPS13D-212ENST00000543766 UBE2D3P61077 147 aa6.71□□□□□ -1.34
VPS13D-212ENST00000543766 UBE2D2P62837 147 aa6.71□□□□□ -1.34
VPS13D-212ENST00000543766 DEFB127Q9H1M4 99 aa6.71□□□□□ -1.34
VPS13D-212ENST00000543766 ACACBO00763 2458 aa6.7□□□□□ -1.34
VPS13D-212ENST00000543766 LAMA5O15230 3695 aa6.7□□□□□ -1.34
VPS13D-212ENST00000543766 SPTY2D1-AS1A0A0U1RR47 76 aa6.7□□□□□ -1.34
VPS13D-212ENST00000543766 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.7□□□□□ -1.34
VPS13D-212ENST00000543766 C10orf128Q5T292 105 aa6.7□□□□□ -1.34
VPS13D-212ENST00000543766 NXPH4O95158 308 aa6.7□□□□□ -1.34
VPS13D-212ENST00000543766 RPRMLQ8N4K4 120 aa6.7□□□□□ -1.34
VPS13D-212ENST00000543766 J3QL48 77 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 MRPS36P82909 103 aaKnown RBP6.69□□□□□ -1.34
VPS13D-212ENST00000543766 Q8N8P6 123 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 UPK3BQ9BT76 320 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 C7orf69Q9H7B7 122 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 NBEAQ8NFP9 2946 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 IGKV3D-11A0A0A0MRZ8 115 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 BUB1B-PAK6H3BSN5 160 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 IGKV1-16P04430 117 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 BSPH1Q075Z2 132 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 ADAMTS20P59510 1910 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 Q6ZVQ6 151 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 C17orf82Q86X59 251 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-212ENST00000543766 ORMDL3Q8N138 153 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 DYNAPQ8N1N2 210 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 ZNF491Q8N8L2 437 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 ZNF492Q9P255 531 aa6.69□□□□□ -1.34
VPS13D-212ENST00000543766 K7EQD1 137 aa6.68□□□□□ -1.34
VPS13D-212ENST00000543766 M0R3E3 92 aa6.68□□□□□ -1.34
VPS13D-212ENST00000543766 NDUFA11Q86Y39 141 aa6.68□□□□□ -1.34
VPS13D-212ENST00000543766 UBALD1Q8TB05 177 aa6.68□□□□□ -1.34
VPS13D-212ENST00000543766 RMI2Q96E14 147 aa6.68□□□□□ -1.34
VPS13D-212ENST00000543766 ZFYVE26Q68DK2 2539 aa6.68□□□□□ -1.34
VPS13D-212ENST00000543766 DNAL4O96015 105 aa6.68□□□□□ -1.34
VPS13D-212ENST00000543766 LINC00313P59037 77 aa6.68□□□□□ -1.34
VPS13D-212ENST00000543766 UBE2AP49459 152 aa6.68□□□□□ -1.34
VPS13D-212ENST00000543766 BRWD1-AS2P59051 145 aa6.68□□□□□ -1.34
VPS13D-212ENST00000543766 SUMO2P61956 95 aaKnown RBP6.68□□□□□ -1.34
VPS13D-212ENST00000543766 PSMG4Q5JS54 123 aa6.68□□□□□ -1.34
VPS13D-212ENST00000543766 DEFB119Q8N690 84 aa6.68□□□□□ -1.34
VPS13D-212ENST00000543766 HS3ST6Q96QI5 342 aa6.68□□□□□ -1.34
VPS13D-212ENST00000543766 M0R135 149 aa6.67□□□□□ -1.34
VPS13D-212ENST00000543766 OTOGLQ3ZCN5 2332 aa6.67□□□□□ -1.34
VPS13D-212ENST00000543766 GYPEP15421 78 aa6.67□□□□□ -1.34
VPS13D-212ENST00000543766 FGF23Q9GZV9 251 aaPredicted RBP6.67□□□□□ -1.34
VPS13D-212ENST00000543766 IGF2RP11717 2491 aa6.67□□□□□ -1.34
VPS13D-212ENST00000543766 C16orf47Q6ZP98 133 aaPredicted RBP6.67□□□□□ -1.34
VPS13D-212ENST00000543766 BAALC-AS2P0C853 105 aa6.66□□□□□ -1.34
VPS13D-212ENST00000543766 B3GALT5-AS1P59052 145 aa6.66□□□□□ -1.34
VPS13D-212ENST00000543766 PRB3Q04118 309 aaPredicted RBP6.66□□□□□ -1.34
VPS13D-212ENST00000543766 C15orf32Q32M92 178 aa6.66□□□□□ -1.34
VPS13D-212ENST00000543766 SMCR5Q8TEV8 140 aa6.66□□□□□ -1.34
VPS13D-212ENST00000543766 CCL13Q99616 98 aa6.66□□□□□ -1.34
VPS13D-212ENST00000543766 ZNF292O60281 2723 aa6.66□□□□□ -1.34
VPS13D-212ENST00000543766 CFC1BP0CG36 223 aa6.66□□□□□ -1.34
VPS13D-212ENST00000543766 CFC1P0CG37 223 aa6.66□□□□□ -1.34
VPS13D-212ENST00000543766 TMEM105Q8N8V8 129 aa6.66□□□□□ -1.34
VPS13D-212ENST00000543766 PATE1Q8WXA2 126 aa6.66□□□□□ -1.34
VPS13D-212ENST00000543766 TIMM21Q9BVV7 248 aa6.66□□□□□ -1.34
VPS13D-212ENST00000543766 PRRC2CQ9Y520 2896 aaKnown RBP6.66□□□□□ -1.34
VPS13D-212ENST00000543766 CACNA1BQ00975 2339 aa6.66□□□□□ -1.34
VPS13D-212ENST00000543766 A0A0G2JNJ9 132 aa6.65□□□□□ -1.34
VPS13D-212ENST00000543766 FAM53AQ6NSI3 398 aaPredicted RBP6.65□□□□□ -1.34
VPS13D-212ENST00000543766 TOMM6Q96B49 74 aa6.65□□□□□ -1.34
VPS13D-212ENST00000543766 Q9UFV3 132 aa6.65□□□□□ -1.34
VPS13D-212ENST00000543766 RP1L1Q8IWN7 2480 aaPredicted RBP6.65□□□□□ -1.34
VPS13D-212ENST00000543766 IGHV1-69DA0A0B4J2H0 117 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms