RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	PDE6G	P18545	87 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961		Q6ZS92	163 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	ARL17A	Q8IVW1	177 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	C8orf59	Q8N0T1	100 aa	Predicted RBP	0.65	□□□□□ -2.31
RDX-215	ENST00000533961	PLPP5	Q8NEB5	264 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	LSM10	Q969L4	123 aa	Known RBP	0.65	□□□□□ -2.31
RDX-215	ENST00000533961	SPTSSA	Q969W0	71 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	LINC00526	Q96FQ7	95 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	DMAC1	Q96GE9	116 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	SEC11C	Q9BY50	192 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	TMEM242	Q9NWH2	141 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	FBN2	P35556	2912 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	IFT140	Q96RY7	1462 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	RB1CC1	Q8TDY2	1594 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	ROS1	P08922	2347 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	MUC22	E2RYF6	1773 aa	Predicted RBP	0.65	□□□□□ -2.31
RDX-215	ENST00000533961	AKAP12	Q02952	1782 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	DLEC1	Q9Y238	1755 aa		0.65	□□□□□ -2.31
RDX-215	ENST00000533961	ANKRD26	Q9UPS8	1709 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.64	□□□□□ -2.31
RDX-215	ENST00000533961	HEATR1	Q9H583	2144 aa	Known RBP	0.64	□□□□□ -2.31
RDX-215	ENST00000533961	PIGBOS1	A0A0B4J2F0	54 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	TRBV10-1	A0A0K0K1A3	114 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	TMEM30CP	A0ZSE6	113 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	TMEM218	A2RU14	115 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	NUPR2	A6NF83	97 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	JMJD7-PLA2G4B	H0Y9G9	81 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	CCL25	O15444	150 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	KLF7	O75840	302 aa	Predicted RBP	0.64	□□□□□ -2.31
RDX-215	ENST00000533961	IGLV3-1	P01715	115 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	IL5	P05113	134 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	PIRT	P0C851	137 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	IL9	P15248	144 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	POLR2J	P52435	117 aa	Known RBP	0.64	□□□□□ -2.31
RDX-215	ENST00000533961	SPRN	Q5BIV9	151 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	SLC48A1	Q6P1K1	146 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	LYPD5	Q6UWN5	251 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	LINC00322	Q6ZN03	302 aa	Predicted RBP	0.64	□□□□□ -2.31
RDX-215	ENST00000533961		Q8N8P6	123 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	TSKU	Q8WUA8	353 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	TMEM141	Q96I45	108 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	AQP10	Q96PS8	301 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	MRPL57	Q9BQC6	102 aa	Known RBP	0.64	□□□□□ -2.31
RDX-215	ENST00000533961	MRPL35	Q9NZE8	188 aa	Known RBP	0.64	□□□□□ -2.31
RDX-215	ENST00000533961	NDUFA12	Q9UI09	145 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	NIN	Q8N4C6	2090 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	MYO18A	Q92614	2054 aa	Known RBP	0.64	□□□□□ -2.31
RDX-215	ENST00000533961	PATJ	Q8NI35	1801 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	NWD2	Q9ULI1	1742 aa		0.64	□□□□□ -2.31
RDX-215	ENST00000533961	PHRF1	Q9P1Y6	1649 aa	Known RBP	0.64	□□□□□ -2.31
RDX-215	ENST00000533961	PLXNA1	Q9UIW2	1896 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	ROBO1	Q9Y6N7	1651 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	ABCC10	Q5T3U5	1492 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	PXDN	Q92626	1479 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	CDK12	Q9NYV4	1490 aa	Predicted RBP	0.63	□□□□□ -2.31
RDX-215	ENST00000533961	HIGD1C	A8MV81	97 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961		H3BQ15	152 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	SNAPC5	O75971	98 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	PPY	P01298	95 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	PRB4	P10163	310 aa	Predicted RBP	0.63	□□□□□ -2.31
RDX-215	ENST00000533961	SLC25A6	P12236	298 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	IFITM1	P13164	125 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	CBLN1	P23435	193 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	NPC2	P61916	151 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	HSD52	Q0P140	79 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	CATR1	Q13166	79 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	C9orf116	Q5BN46	136 aa	Predicted RBP	0.63	□□□□□ -2.31
RDX-215	ENST00000533961	GDF5OS	Q5U4N7	250 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	MRPL54	Q6P161	138 aa	Known RBP	0.63	□□□□□ -2.31
RDX-215	ENST00000533961	CSAG1	Q6PB30	78 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	UNQ5815/PRO19632	Q6UWF5	114 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	GTF2H5	Q6ZYL4	71 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	C4orf33	Q8N1A6	199 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	TTC9C	Q8N5M4	171 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	ATG5	Q9H1Y0	275 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	TMEM14C	Q9P0S9	112 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	ABCA3	Q99758	1704 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	PEAK1	Q9H792	1746 aa		0.63	□□□□□ -2.31
RDX-215	ENST00000533961	TNS1	Q9HBL0	1735 aa	Known RBP	0.63	□□□□□ -2.31
RDX-215	ENST00000533961	BLM	P54132	1417 aa	Predicted RBP	0.63	□□□□□ -2.31
RDX-215	ENST00000533961	TOPAZ1	Q8N9V7	1692 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	CIT	O14578	2027 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	CHD3	Q12873	2000 aa	Known RBP	0.62	□□□□□ -2.31
RDX-215	ENST00000533961	ADGRL2	O95490	1459 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	GAPVD1	Q14C86	1478 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	TEX14	Q8IWB6	1497 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	PARP14	Q460N5	1801 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	NRXN2	Q9P2S2	1712 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	NCOA6	Q14686	2063 aa	Predicted RBP	0.62	□□□□□ -2.31
RDX-215	ENST00000533961	TRBV10-3	A0A0K0K1G6	114 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	TEX49	A0A1B0GTD5	131 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	TCRBV3S1	A0A5B6	114 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	OOSP1	A8MZH6	123 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	TMEM262	E9PQX1	116 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961		M0R143	59 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	SSSCA1	O60232	199 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	ATP5E	P56381	51 aa	Predicted RBP	0.62	□□□□□ -2.31
RDX-215	ENST00000533961	PKIA	P61925	76 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	CCL8	P80075	99 aa		0.62	□□□□□ -2.31
RDX-215	ENST00000533961	IQCJ	Q1A5X6	159 aa		0.62	□□□□□ -2.31

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