RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 TP53TG1Q9Y2A0 90 aa5.84□□□□□ -1.47
PTPRK-219ENST00000531050 FAM186AA6NE01 2351 aa5.84□□□□□ -1.47
PTPRK-219ENST00000531050 IGHV1-69DA0A0B4J2H0 117 aa5.84□□□□□ -1.47
PTPRK-219ENST00000531050 SDHAF1A6NFY7 115 aa5.84□□□□□ -1.47
PTPRK-219ENST00000531050 PRAC2D3DTV9 90 aa5.84□□□□□ -1.47
PTPRK-219ENST00000531050 NDUFC2-KCTD14E9PQ53 114 aa5.84□□□□□ -1.47
PTPRK-219ENST00000531050 CD59P13987 128 aa5.84□□□□□ -1.47
PTPRK-219ENST00000531050 TIRAPP58753 221 aa5.84□□□□□ -1.47
PTPRK-219ENST00000531050 TMEM30BQ3MIR4 351 aa5.84□□□□□ -1.47
PTPRK-219ENST00000531050 SPANXN1Q5VSR9 72 aa5.84□□□□□ -1.47
PTPRK-219ENST00000531050 MDS2Q8NDY4 140 aa5.84□□□□□ -1.47
PTPRK-219ENST00000531050 DSCAMO60469 2012 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 TRAV12-2A0A075B6T6 113 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 LHBP01229 141 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 DAZ2Q13117 558 aaKnown RBP5.83□□□□□ -1.48
PTPRK-219ENST00000531050 TMEM200BQ69YZ2 307 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 DAZ4Q86SG3 579 aaKnown RBP5.83□□□□□ -1.48
PTPRK-219ENST00000531050 WFDC11Q8NEX6 87 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 DYNLRB1Q9NP97 96 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 DAZ1Q9NQZ3 744 aaKnown RBP5.83□□□□□ -1.48
PTPRK-219ENST00000531050 DAZ3Q9NR90 486 aaKnown RBP5.83□□□□□ -1.48
PTPRK-219ENST00000531050 FRYLO94915 3013 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 A0A087WVE0 104 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 TRGV5A0A0B4J1U4 118 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 USP17L23D6RBM5 183 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 K7EIM0 57 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 CDSNQ15517 529 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 ADAMTSL4-AS1Q5T5F5 129 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 FAM223AQ8IWN6 122 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 ZNF580Q9UK33 172 aa5.83□□□□□ -1.48
PTPRK-219ENST00000531050 IGHV3-64A0A075B6Q5 118 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 TMEM178BH3BS89 294 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 BUB3O43684 328 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 NDUFC2O95298 119 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 RPL39P62891 51 aaKnown RBP5.82□□□□□ -1.48
PTPRK-219ENST00000531050 TMEM61Q8N0U2 210 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 TMEM141Q96I45 108 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 GAFA1Q96PS6 74 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 ARRDC1-AS1Q9H2J1 176 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 SMAD5-AS1Q9Y6J3 95 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 PLCE1Q9P212 2302 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 FAM223BA6NKX1 122 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 IGHV1-2P23083 117 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 FP248Q71RG6 208 aaPredicted RBP5.82□□□□□ -1.48
PTPRK-219ENST00000531050 SERP1Q9Y6X1 66 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 PRR14LQ5THK1 2151 aa5.82□□□□□ -1.48
PTPRK-219ENST00000531050 BDP1A6H8Y1 2624 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 IGKV3D-7A0A0C4DH55 119 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 A0A0U1RQV1 116 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 ADARB2-AS1A8MUL3 147 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 LYZL6O75951 148 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 GPHB5Q86YW7 130 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 C16orf92Q96LL3 132 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 TIMM17AQ99595 171 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 CCL13Q99616 98 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 TECTAO75443 2155 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 DMDP11532 3685 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 IGHV3-72A0A0B4J1Y9 119 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 M0R381 172 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 MSMPQ1L6U9 139 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 BEAN1Q3B7T3 259 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 DEFB104AQ8WTQ1 72 aa5.81□□□□□ -1.48
PTPRK-219ENST00000531050 TRAV12-3A0A0B4J271 114 aa5.8□□□□□ -1.48
PTPRK-219ENST00000531050 M0R1W7 72 aa5.8□□□□□ -1.48
PTPRK-219ENST00000531050 Q6JHZ5 121 aa5.8□□□□□ -1.48
PTPRK-219ENST00000531050 GFRALQ6UXV0 394 aa5.8□□□□□ -1.48
PTPRK-219ENST00000531050 DEFB108BQ8NET1 73 aa5.8□□□□□ -1.48
PTPRK-219ENST00000531050 TTC28Q96AY4 2481 aa5.8□□□□□ -1.48
PTPRK-219ENST00000531050 IGKV3-15P01624 115 aa5.8□□□□□ -1.48
PTPRK-219ENST00000531050 CCL3L1P16619 93 aa5.8□□□□□ -1.48
PTPRK-219ENST00000531050 MIAQ16674 131 aa5.8□□□□□ -1.48
PTPRK-219ENST00000531050 TMEM243Q9BU79 118 aa5.8□□□□□ -1.48
PTPRK-219ENST00000531050 RNF7Q9UBF6 113 aa5.8□□□□□ -1.48
PTPRK-219ENST00000531050 NCOR1O75376 2440 aa5.8□□□□□ -1.48
PTPRK-219ENST00000531050 CFAP47Q6ZTR5 3102 aa5.79□□□□□ -1.48
PTPRK-219ENST00000531050 BAALC-AS2P0C853 105 aa5.79□□□□□ -1.48
PTPRK-219ENST00000531050 LOXP28300 417 aaPredicted RBP5.79□□□□□ -1.48
PTPRK-219ENST00000531050 S4R3C0 116 aa5.79□□□□□ -1.48
PTPRK-219ENST00000531050 ZDBF2Q9HCK1 2354 aa5.79□□□□□ -1.48
PTPRK-219ENST00000531050 MED13Q9UHV7 2174 aa5.79□□□□□ -1.48
PTPRK-219ENST00000531050 OPRPNQ99935 248 aaPredicted RBP5.79□□□□□ -1.48
PTPRK-219ENST00000531050 ZFAND3Q9H8U3 227 aa5.79□□□□□ -1.48
PTPRK-219ENST00000531050 SPRR3Q9UBC9 169 aa5.79□□□□□ -1.48
PTPRK-219ENST00000531050 COX7A2LO14548 114 aa5.78□□□□□ -1.48
PTPRK-219ENST00000531050 MGPP08493 103 aa5.78□□□□□ -1.48
PTPRK-219ENST00000531050 INAFM2P0DMQ5 153 aa5.78□□□□□ -1.48
PTPRK-219ENST00000531050 ATP1A1-AS1Q5TC04 95 aa5.78□□□□□ -1.48
PTPRK-219ENST00000531050 RNF182Q8N6D2 247 aa5.78□□□□□ -1.48
PTPRK-219ENST00000531050 RNASE6Q93091 150 aaKnown RBP5.78□□□□□ -1.48
PTPRK-219ENST00000531050 DEFB127Q9H1M4 99 aa5.78□□□□□ -1.48
PTPRK-219ENST00000531050 UBE2D4Q9Y2X8 147 aa5.78□□□□□ -1.48
PTPRK-219ENST00000531050 DNAJC13O75165 2243 aa5.78□□□□□ -1.48
PTPRK-219ENST00000531050 SMIM26A0A096LP01 95 aa5.78□□□□□ -1.48
PTPRK-219ENST00000531050 PLA2G2CQ5R387 149 aa5.78□□□□□ -1.48
PTPRK-219ENST00000531050 FAM222AQ5U5X8 452 aa5.78□□□□□ -1.48
PTPRK-219ENST00000531050 LINC00482Q8N8I6 264 aa5.78□□□□□ -1.48
PTPRK-219ENST00000531050 SLC25A15Q9Y619 301 aa5.78□□□□□ -1.48
PTPRK-219ENST00000531050 AHCTF1Q8WYP5 2266 aa5.77□□□□□ -1.49
PTPRK-219ENST00000531050 NBR2O15453 112 aa5.77□□□□□ -1.49
PTPRK-219ENST00000531050 IGHV3-30-3P0DP02 117 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms