RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.68□□□□□ -0.7
PCF11-204ENST00000530660 IGHV3-74A0A0B4J1X5 117 aa10.68□□□□□ -0.7
PCF11-204ENST00000530660 NPC2P61916 151 aa10.68□□□□□ -0.7
PCF11-204ENST00000530660 CNOT1A5YKK6 2376 aaKnown RBP10.68□□□□□ -0.7
PCF11-204ENST00000530660 IGIPA6NJ69 53 aa10.68□□□□□ -0.7
PCF11-204ENST00000530660 MFAP4P55083 255 aa10.68□□□□□ -0.7
PCF11-204ENST00000530660 DEFB121Q5J5C9 76 aa10.68□□□□□ -0.7
PCF11-204ENST00000530660 PAPPA-AS1Q5QFB9 102 aa10.68□□□□□ -0.7
PCF11-204ENST00000530660 FDCSPQ8NFU4 85 aa10.68□□□□□ -0.7
PCF11-204ENST00000530660 PCNX1Q96RV3 2341 aa10.67□□□□□ -0.7
PCF11-204ENST00000530660 OVOL1O14753 267 aa10.67□□□□□ -0.7
PCF11-204ENST00000530660 CCL17Q92583 94 aa10.67□□□□□ -0.7
PCF11-204ENST00000530660 C2orf48Q96LS8 159 aa10.67□□□□□ -0.7
PCF11-204ENST00000530660 OPRPNQ99935 248 aaPredicted RBP10.67□□□□□ -0.7
PCF11-204ENST00000530660 NCOR1O75376 2440 aa10.67□□□□□ -0.7
PCF11-204ENST00000530660 F8W735 103 aaPredicted RBP10.67□□□□□ -0.7
PCF11-204ENST00000530660 CD59P13987 128 aa10.67□□□□□ -0.7
PCF11-204ENST00000530660 RPS28P62857 69 aaKnown RBP10.67□□□□□ -0.7
PCF11-204ENST00000530660 DSCR8Q96T75 97 aa10.67□□□□□ -0.7
PCF11-204ENST00000530660 RELNP78509 3460 aa10.66□□□□□ -0.7
PCF11-204ENST00000530660 IGHV4-4A0A075B6R2 117 aa10.66□□□□□ -0.7
PCF11-204ENST00000530660 IGHV1-3A0A0C4DH29 117 aa10.66□□□□□ -0.7
PCF11-204ENST00000530660 NDUFB3O43676 98 aa10.66□□□□□ -0.7
PCF11-204ENST00000530660 NSUN5P1Q3KNT7 163 aa10.66□□□□□ -0.7
PCF11-204ENST00000530660 DUX5Q96PT3 197 aa10.66□□□□□ -0.7
PCF11-204ENST00000530660 IGHV1-8P0DP01 117 aa10.66□□□□□ -0.7
PCF11-204ENST00000530660 LOXP28300 417 aaPredicted RBP10.65□□□□□ -0.7
PCF11-204ENST00000530660 IGF1P05019 195 aa10.65□□□□□ -0.7
PCF11-204ENST00000530660 DPH3Q96FX2 82 aa10.65□□□□□ -0.7
PCF11-204ENST00000530660 SVEP1Q4LDE5 3571 aa10.65□□□□□ -0.71
PCF11-204ENST00000530660 FAM27E3Q08E93 113 aa10.64□□□□□ -0.71
PCF11-204ENST00000530660 PRR9Q5T870 116 aa10.64□□□□□ -0.71
PCF11-204ENST00000530660 CRYGAP11844 174 aa10.64□□□□□ -0.71
PCF11-204ENST00000530660 LST1O00453 97 aa10.64□□□□□ -0.71
PCF11-204ENST00000530660 COX6CP09669 75 aa10.64□□□□□ -0.71
PCF11-204ENST00000530660 RHOHQ15669 191 aa10.64□□□□□ -0.71
PCF11-204ENST00000530660 C8orf31Q8N9H6 132 aa10.64□□□□□ -0.71
PCF11-204ENST00000530660 RS1O15537 224 aa10.63□□□□□ -0.71
PCF11-204ENST00000530660 ZNF876PQ49A33 203 aa10.63□□□□□ -0.71
PCF11-204ENST00000530660 LINC00643Q86TS7 51 aa10.63□□□□□ -0.71
PCF11-204ENST00000530660 GPHB5Q86YW7 130 aa10.63□□□□□ -0.71
PCF11-204ENST00000530660 DPH3P1Q9H4G8 78 aa10.63□□□□□ -0.71
PCF11-204ENST00000530660 TECTAO75443 2155 aa10.63□□□□□ -0.71
PCF11-204ENST00000530660 I3L3M4 83 aa10.63□□□□□ -0.71
PCF11-204ENST00000530660 FANCD2OSQ96PS1 177 aa10.63□□□□□ -0.71
PCF11-204ENST00000530660 IGHV3-49A0A0A0MS15 119 aa10.63□□□□□ -0.71
PCF11-204ENST00000530660 TRAV12-3A0A0B4J271 114 aa10.63□□□□□ -0.71
PCF11-204ENST00000530660 A0A0J9YXY3 114 aa10.63□□□□□ -0.71
PCF11-204ENST00000530660 ASCL5Q7RTU5 278 aa10.63□□□□□ -0.71
PCF11-204ENST00000530660 ATMQ13315 3056 aa10.62□□□□□ -0.71
PCF11-204ENST00000530660 TMEM178BH3BS89 294 aa10.62□□□□□ -0.71
PCF11-204ENST00000530660 TRACP01848 142 aa10.62□□□□□ -0.71
PCF11-204ENST00000530660 ARRDC1-AS1Q9H2J1 176 aa10.62□□□□□ -0.71
PCF11-204ENST00000530660 LEPROTO15243 131 aa10.62□□□□□ -0.71
PCF11-204ENST00000530660 COX7A1P24310 79 aa10.62□□□□□ -0.71
PCF11-204ENST00000530660 ADAMTSL4-AS1Q5T5F5 129 aa10.62□□□□□ -0.71
PCF11-204ENST00000530660 MUC4Q99102 2169 aa10.61□□□□□ -0.71
PCF11-204ENST00000530660 S100A4P26447 101 aaKnown RBP10.61□□□□□ -0.71
PCF11-204ENST00000530660 RNF152Q8N8N0 203 aa10.61□□□□□ -0.71
PCF11-204ENST00000530660 LAMA5O15230 3695 aa10.61□□□□□ -0.71
PCF11-204ENST00000530660 MBD3L4A6NDZ8 208 aaPredicted RBP10.61□□□□□ -0.71
PCF11-204ENST00000530660 MBD3L3A6NE82 208 aaPredicted RBP10.61□□□□□ -0.71
PCF11-204ENST00000530660 MBD3L5A6NJ08 208 aaPredicted RBP10.61□□□□□ -0.71
PCF11-204ENST00000530660 Q5XG85 94 aa10.61□□□□□ -0.71
PCF11-204ENST00000530660 MBD3L2Q8NHZ7 208 aaPredicted RBP10.61□□□□□ -0.71
PCF11-204ENST00000530660 PHLDA3Q9Y5J5 127 aa10.61□□□□□ -0.71
PCF11-204ENST00000530660 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.6□□□□□ -0.71
PCF11-204ENST00000530660 CTSGP08311 255 aa10.6□□□□□ -0.71
PCF11-204ENST00000530660 DMXL1Q9Y485 3027 aa10.6□□□□□ -0.71
PCF11-204ENST00000530660 FAM19A4Q96LR4 140 aa10.6□□□□□ -0.71
PCF11-204ENST00000530660 IGHV1-69DA0A0B4J2H0 117 aa10.59□□□□□ -0.71
PCF11-204ENST00000530660 ACYP1P07311 99 aa10.59□□□□□ -0.71
PCF11-204ENST00000530660 C5orf38Q86SI9 138 aa10.59□□□□□ -0.71
PCF11-204ENST00000530660 LITAFQ99732 161 aa10.59□□□□□ -0.71
PCF11-204ENST00000530660 FAM215AQ9Y5M1 114 aa10.59□□□□□ -0.71
PCF11-204ENST00000530660 CACNA1HO95180 2353 aa10.59□□□□□ -0.71
PCF11-204ENST00000530660 IGLV11-55A0A075B6I3 123 aa10.58□□□□□ -0.72
PCF11-204ENST00000530660 BUB1B-PAK6H3BSN5 160 aa10.58□□□□□ -0.72
PCF11-204ENST00000530660 DCANP1Q8TF63 244 aa10.58□□□□□ -0.72
PCF11-204ENST00000530660 TRBV7-1A0A0A6YYK4 115 aa10.58□□□□□ -0.72
PCF11-204ENST00000530660 TRAV13-1A0A0B4J241 112 aa10.58□□□□□ -0.72
PCF11-204ENST00000530660 IGLV1-47P01700 117 aa10.58□□□□□ -0.72
PCF11-204ENST00000530660 ATP5G1P05496 136 aa10.58□□□□□ -0.72
PCF11-204ENST00000530660 A0A0J9YXV3 536 aa10.58□□□□□ -0.72
PCF11-204ENST00000530660 TMEM141Q96I45 108 aa10.58□□□□□ -0.72
PCF11-204ENST00000530660 JPT2Q9H910 190 aa10.58□□□□□ -0.72
PCF11-204ENST00000530660 MED13LQ71F56 2210 aa10.57□□□□□ -0.72
PCF11-204ENST00000530660 TRIOBPQ9H2D6 2365 aa10.57□□□□□ -0.72
PCF11-204ENST00000530660 TIMM21Q9BVV7 248 aa10.57□□□□□ -0.72
PCF11-204ENST00000530660 DEFB1P60022 68 aa10.56□□□□□ -0.72
PCF11-204ENST00000530660 KLRB1Q12918 225 aa10.56□□□□□ -0.72
PCF11-204ENST00000530660 TIMM17AQ99595 171 aa10.56□□□□□ -0.72
PCF11-204ENST00000530660 GNRH2O43555 120 aa10.56□□□□□ -0.72
PCF11-204ENST00000530660 BUB3O43684 328 aa10.56□□□□□ -0.72
PCF11-204ENST00000530660 SDIM1Q6ZPB5 146 aa10.56□□□□□ -0.72
PCF11-204ENST00000530660 DAND5Q8N907 189 aa10.56□□□□□ -0.72
PCF11-204ENST00000530660 LINC00477Q96M19 166 aa10.55□□□□□ -0.72
PCF11-204ENST00000530660 A8MZ25 164 aa10.55□□□□□ -0.72
PCF11-204ENST00000530660 IGHV3-30-3P0DP02 117 aa10.55□□□□□ -0.72
PCF11-204ENST00000530660 DAZ2Q13117 558 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 778.3 ms