RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 V9GYH0 126 aa5.06□□□□□ -1.6
USP48-212ENST00000527823 L7N2F9 121 aa5.05□□□□□ -1.6
USP48-212ENST00000527823 CCSO14618 274 aa5.05□□□□□ -1.6
USP48-212ENST00000527823 RNASE3P12724 160 aaKnown RBP5.05□□□□□ -1.6
USP48-212ENST00000527823 CSN1S1P47710 185 aa5.05□□□□□ -1.6
USP48-212ENST00000527823 BCAP31P51572 246 aa5.05□□□□□ -1.6
USP48-212ENST00000527823 RANP62826 216 aaKnown RBP5.05□□□□□ -1.6
USP48-212ENST00000527823 UBE2L3P68036 154 aaKnown RBP5.05□□□□□ -1.6
USP48-212ENST00000527823 RPL19P84098 196 aaKnown RBP5.05□□□□□ -1.6
USP48-212ENST00000527823 UFSP1Q6NVU6 142 aa5.05□□□□□ -1.6
USP48-212ENST00000527823 OR10G9Q8NGN4 311 aa5.05□□□□□ -1.6
USP48-212ENST00000527823 KCNS1Q96KK3 526 aa5.05□□□□□ -1.6
USP48-212ENST00000527823 SLIRPQ9GZT3 109 aaKnown RBP5.05□□□□□ -1.6
USP48-212ENST00000527823 C20orf85Q9H1P6 137 aa5.05□□□□□ -1.6
USP48-212ENST00000527823 SH3BGRL3Q9H299 93 aa5.05□□□□□ -1.6
USP48-212ENST00000527823 GSKIPQ9P0R6 139 aa5.05□□□□□ -1.6
USP48-212ENST00000527823 LSM5Q9Y4Y9 91 aaKnown RBP5.05□□□□□ -1.6
USP48-212ENST00000527823 A0A087WX48 190 aa5.04□□□□□ -1.6
USP48-212ENST00000527823 OR7C2O60412 319 aa5.04□□□□□ -1.6
USP48-212ENST00000527823 NDUFB6O95139 128 aa5.04□□□□□ -1.6
USP48-212ENST00000527823 CRPP02741 224 aa5.04□□□□□ -1.6
USP48-212ENST00000527823 SULT1A1P50225 295 aa5.04□□□□□ -1.6
USP48-212ENST00000527823 ZNF80P51504 273 aaPredicted RBP5.04□□□□□ -1.6
USP48-212ENST00000527823 Q0VG73 95 aa5.04□□□□□ -1.6
USP48-212ENST00000527823 MPV17L2Q567V2 206 aa5.04□□□□□ -1.6
USP48-212ENST00000527823 KRTAP26-1Q6PEX3 210 aa5.04□□□□□ -1.6
USP48-212ENST00000527823 ZFP2Q6ZN57 461 aa5.04□□□□□ -1.6
USP48-212ENST00000527823 OR2T35Q8NGX2 323 aa5.04□□□□□ -1.6
USP48-212ENST00000527823 THAP6Q8TBB0 222 aa5.04□□□□□ -1.6
USP48-212ENST00000527823 PTH2Q96A98 100 aa5.04□□□□□ -1.6
USP48-212ENST00000527823 BCL7BQ9BQE9 202 aa5.04□□□□□ -1.6
USP48-212ENST00000527823 LYRM2Q9NU23 88 aaPredicted RBP5.04□□□□□ -1.6
USP48-212ENST00000527823 CNBPP62633 177 aaKnown RBP5.03□□□□□ -1.6
USP48-212ENST00000527823 ELOBQ15370 118 aa5.03□□□□□ -1.6
USP48-212ENST00000527823 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
USP48-212ENST00000527823 GOLT1AQ6ZVE7 132 aa5.03□□□□□ -1.6
USP48-212ENST00000527823 TMEM252Q8N6L7 170 aa5.03□□□□□ -1.6
USP48-212ENST00000527823 C15orf54Q8N8G6 183 aa5.03□□□□□ -1.6
USP48-212ENST00000527823 DEDD2Q8WXF8 326 aa5.03□□□□□ -1.6
USP48-212ENST00000527823 HYLS1Q96M11 299 aa5.03□□□□□ -1.6
USP48-212ENST00000527823 JPT2Q9H910 190 aa5.03□□□□□ -1.6
USP48-212ENST00000527823 TREM1Q9NP99 234 aa5.03□□□□□ -1.6
USP48-212ENST00000527823 PLAC8Q9NZF1 115 aa5.03□□□□□ -1.6
USP48-212ENST00000527823 A8MWV9 139 aa5.02□□□□□ -1.61
USP48-212ENST00000527823 EIF3GO75821 320 aaKnown RBP eCLIP5.02□□□□□ -1.61
USP48-212ENST00000527823 BTCP35070 178 aa5.02□□□□□ -1.61
USP48-212ENST00000527823 GNG5P63218 68 aa5.02□□□□□ -1.61
USP48-212ENST00000527823 PYDC2Q56P42 97 aa5.02□□□□□ -1.61
USP48-212ENST00000527823 SPANXN2Q5MJ10 180 aa5.02□□□□□ -1.61
USP48-212ENST00000527823 CLPSL2Q6UWE3 100 aa5.02□□□□□ -1.61
USP48-212ENST00000527823 STX12Q86Y82 276 aa5.02□□□□□ -1.61
USP48-212ENST00000527823 OR10G7Q8NGN6 311 aa5.02□□□□□ -1.61
USP48-212ENST00000527823 MITD1Q8WV92 249 aa5.02□□□□□ -1.61
USP48-212ENST00000527823 RNF185Q96GF1 192 aa5.02□□□□□ -1.61
USP48-212ENST00000527823 MUC21A0A0G2JKD1 596 aa5.01□□□□□ -1.61
USP48-212ENST00000527823 PGPA6NDG6 321 aa5.01□□□□□ -1.61
USP48-212ENST00000527823 S100A11P31949 105 aa5.01□□□□□ -1.61
USP48-212ENST00000527823 CAMPP49913 170 aa5.01□□□□□ -1.61
USP48-212ENST00000527823 FGF8P55075 233 aaPredicted RBP5.01□□□□□ -1.61
USP48-212ENST00000527823 HBG1P69891 147 aa5.01□□□□□ -1.61
USP48-212ENST00000527823 HBG2P69892 147 aa5.01□□□□□ -1.61
USP48-212ENST00000527823 KCNIP4Q6PIL6 250 aa5.01□□□□□ -1.61
USP48-212ENST00000527823 C7orf33Q8WU49 177 aa5.01□□□□□ -1.61
USP48-212ENST00000527823 SGK494Q96LW2 274 aa5.01□□□□□ -1.61
USP48-212ENST00000527823 OTORQ9NRC9 128 aa5.01□□□□□ -1.61
USP48-212ENST00000527823 IGHV3-64A0A075B6Q5 118 aa5□□□□□ -1.61
USP48-212ENST00000527823 A0A1B0GUV1 79 aa5□□□□□ -1.61
USP48-212ENST00000527823 GCGP01275 180 aa5□□□□□ -1.61
USP48-212ENST00000527823 ANGP03950 147 aaKnown RBP5□□□□□ -1.61
USP48-212ENST00000527823 S100A10P60903 97 aa5□□□□□ -1.61
USP48-212ENST00000527823 UBE2D3P61077 147 aa5□□□□□ -1.61
USP48-212ENST00000527823 UBE2D2P62837 147 aa5□□□□□ -1.61
USP48-212ENST00000527823 MIAQ16674 131 aa5□□□□□ -1.61
USP48-212ENST00000527823 KHDC3LQ587J8 217 aa5□□□□□ -1.61
USP48-212ENST00000527823 OR2G3Q8NGZ4 309 aa5□□□□□ -1.61
USP48-212ENST00000527823 CMTM2Q8TAZ6 248 aa5□□□□□ -1.61
USP48-212ENST00000527823 PRR34Q9NV39 138 aa5□□□□□ -1.61
USP48-212ENST00000527823 IGKV3D-20A0A0C4DH25 116 aa4.99□□□□□ -1.61
USP48-212ENST00000527823 FAM25EA8MYX2 175 aa4.99□□□□□ -1.61
USP48-212ENST00000527823 RPL36AP83881 106 aaKnown RBP4.99□□□□□ -1.61
USP48-212ENST00000527823 ATP6V1FQ16864 119 aa4.99□□□□□ -1.61
USP48-212ENST00000527823 LGALSLQ3ZCW2 172 aaPredicted RBP4.99□□□□□ -1.61
USP48-212ENST00000527823 FAM74A4Q5TZK3 123 aa4.99□□□□□ -1.61
USP48-212ENST00000527823 REG3GQ6UW15 175 aa4.99□□□□□ -1.61
USP48-212ENST00000527823 OR5C1Q8NGR4 320 aa4.99□□□□□ -1.61
USP48-212ENST00000527823 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
USP48-212ENST00000527823 NMES1Q9C002 83 aa4.99□□□□□ -1.61
USP48-212ENST00000527823 KCNIP2Q9NS61 270 aa4.99□□□□□ -1.61
USP48-212ENST00000527823 TRBV6-8A0A0A6YYG3 113 aa4.98□□□□□ -1.61
USP48-212ENST00000527823 A0A0U1RQV1 116 aa4.98□□□□□ -1.61
USP48-212ENST00000527823 H3BVH4 76 aa4.98□□□□□ -1.61
USP48-212ENST00000527823 TAAR5O14804 337 aa4.98□□□□□ -1.61
USP48-212ENST00000527823 PVALBP20472 110 aaPredicted RBP4.98□□□□□ -1.61
USP48-212ENST00000527823 IL15RAQ13261 267 aa4.98□□□□□ -1.61
USP48-212ENST00000527823 MZT2BQ6NZ67 158 aa4.98□□□□□ -1.61
USP48-212ENST00000527823 SPINK6Q6UWN8 80 aa4.98□□□□□ -1.61
USP48-212ENST00000527823 NDFIP1Q9BT67 221 aa4.98□□□□□ -1.61
USP48-212ENST00000527823 WDR61Q9GZS3 305 aaKnown RBP4.98□□□□□ -1.61
USP48-212ENST00000527823 OR5AC2Q9NZP5 309 aa4.98□□□□□ -1.61
USP48-212ENST00000527823 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms