RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 C1orf162Q8NEQ5 155 aaPredicted RBP8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 PRORYQ9H606 182 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 IGHV7-4-1A0A0J9YVY3 117 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 CRYGBP07316 175 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 CRYGDP07320 174 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 GRNP28799 593 aaKnown RBP8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 HES1Q14469 280 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 NRGNQ92686 78 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 IGHV1-3A0A0C4DH29 117 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 IGHV1-8P0DP01 117 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 ADIPOQQ15848 244 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 COX8CQ7Z4L0 72 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 MUSTN1Q8IVN3 82 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 UBTD1Q9HAC8 227 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 PRB1P04280 392 aa8.57□□□□□ -1.04
CLNS1A-204ENST00000525428 LGALS3P17931 250 aaKnown RBP8.57□□□□□ -1.04
CLNS1A-204ENST00000525428 RPL39P62891 51 aaKnown RBP8.57□□□□□ -1.04
CLNS1A-204ENST00000525428 PSMG3-AS1Q96PY0 264 aa8.57□□□□□ -1.04
CLNS1A-204ENST00000525428 PMVKQ15126 192 aa8.57□□□□□ -1.04
CLNS1A-204ENST00000525428 AGPAT4-IT1Q9H0P7 198 aa8.57□□□□□ -1.04
CLNS1A-204ENST00000525428 IGLV4-69A0A075B6H9 119 aa8.56□□□□□ -1.04
CLNS1A-204ENST00000525428 CCL21O00585 134 aa8.56□□□□□ -1.04
CLNS1A-204ENST00000525428 PRSS2P07478 247 aa8.56□□□□□ -1.04
CLNS1A-204ENST00000525428 POLQO75417 2590 aa8.56□□□□□ -1.04
CLNS1A-204ENST00000525428 IGLV3-9A0A075B6K5 115 aa8.56□□□□□ -1.04
CLNS1A-204ENST00000525428 ADARB2-AS1A8MUL3 147 aa8.56□□□□□ -1.04
CLNS1A-204ENST00000525428 J3QQQ9 107 aa8.56□□□□□ -1.04
CLNS1A-204ENST00000525428 TRIAP1O43715 76 aa8.56□□□□□ -1.04
CLNS1A-204ENST00000525428 C5orf47Q569G3 176 aa8.56□□□□□ -1.04
CLNS1A-204ENST00000525428 TEX36Q5VZQ5 186 aa8.56□□□□□ -1.04
CLNS1A-204ENST00000525428 TMEM263Q8WUH6 116 aaKnown RBP8.56□□□□□ -1.04
CLNS1A-204ENST00000525428 TP53TG1Q9Y2A0 90 aa8.56□□□□□ -1.04
CLNS1A-204ENST00000525428 TRBV10-2A0A0K0K1G8 114 aa8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 NPC2P61916 151 aa8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 HRNRQ86YZ3 2850 aaPredicted RBP8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 NPFFO15130 113 aa8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 MFAP4P55083 255 aa8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 HERVK_113P63121 156 aa8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 Q6ZSV7 163 aa8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 FAM19A5Q7Z5A7 132 aaPredicted RBP8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 CLEC2BQ92478 149 aa8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 EDA2RQ9HAV5 297 aa8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 TSHBP01222 138 aa8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 CD3EP07766 207 aa8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 S100A4P26447 101 aaKnown RBP8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 LOXP28300 417 aaPredicted RBP8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 LINC00311Q8N616 119 aa8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 ZNRF2Q8NHG8 242 aa8.55□□□□□ -1.04
CLNS1A-204ENST00000525428 RBAKDNA6NC62 111 aa8.54□□□□□ -1.04
CLNS1A-204ENST00000525428 IGF1P05019 195 aa8.54□□□□□ -1.04
CLNS1A-204ENST00000525428 PF4V1P10720 104 aa8.54□□□□□ -1.04
CLNS1A-204ENST00000525428 ZNF672Q499Z4 452 aaPredicted RBP8.54□□□□□ -1.04
CLNS1A-204ENST00000525428 EEF1AKMT3Q96AZ1 226 aa8.54□□□□□ -1.04
CLNS1A-204ENST00000525428 DNAJC30Q96LL9 226 aa8.54□□□□□ -1.04
CLNS1A-204ENST00000525428 CUBNO60494 3623 aa8.54□□□□□ -1.04
CLNS1A-204ENST00000525428 SMIM9A6NGZ8 99 aa8.54□□□□□ -1.04
CLNS1A-204ENST00000525428 H7C423 109 aa8.54□□□□□ -1.04
CLNS1A-204ENST00000525428 RPL13AP40429 203 aaKnown RBP8.54□□□□□ -1.04
CLNS1A-204ENST00000525428 SLC50A1Q9BRV3 221 aa8.54□□□□□ -1.04
CLNS1A-204ENST00000525428 NDUFA7O95182 113 aa8.53□□□□□ -1.04
CLNS1A-204ENST00000525428 LINC01560Q8TB33 94 aa8.53□□□□□ -1.04
CLNS1A-204ENST00000525428 OPRPNQ99935 248 aaPredicted RBP8.53□□□□□ -1.04
CLNS1A-204ENST00000525428 SPANXA1Q9NS26 97 aa8.53□□□□□ -1.04
CLNS1A-204ENST00000525428 ZNF580Q9UK33 172 aa8.53□□□□□ -1.04
CLNS1A-204ENST00000525428 TMEM101Q96IK0 257 aa8.53□□□□□ -1.04
CLNS1A-204ENST00000525428 F8W735 103 aaPredicted RBP8.52□□□□□ -1.04
CLNS1A-204ENST00000525428 SRSF2Q01130 221 aaKnown RBP8.52□□□□□ -1.04
CLNS1A-204ENST00000525428 LINC00527Q9UJ94 153 aa8.52□□□□□ -1.04
CLNS1A-204ENST00000525428 BUB1B-PAK6H3BSN5 160 aa8.52□□□□□ -1.05
CLNS1A-204ENST00000525428 FANCD2OSQ96PS1 177 aa8.52□□□□□ -1.05
CLNS1A-204ENST00000525428 ABCA12Q86UK0 2595 aa8.52□□□□□ -1.05
CLNS1A-204ENST00000525428 TRAV8-3A0A0A6YYJ7 113 aa8.52□□□□□ -1.05
CLNS1A-204ENST00000525428 P0DMU3 169 aa8.52□□□□□ -1.05
CLNS1A-204ENST00000525428 FAM231AP0DMU4 169 aa8.52□□□□□ -1.05
CLNS1A-204ENST00000525428 FAM231CP0DMU5 169 aa8.52□□□□□ -1.05
CLNS1A-204ENST00000525428 GNLYP22749 145 aa8.52□□□□□ -1.05
CLNS1A-204ENST00000525428 AMELXQ99217 191 aa8.52□□□□□ -1.05
CLNS1A-204ENST00000525428 PHLDA3Q9Y5J5 127 aa8.52□□□□□ -1.05
CLNS1A-204ENST00000525428 TRAV41A0A0B4J266 112 aa8.51□□□□□ -1.05
CLNS1A-204ENST00000525428 UBE2E1P51965 193 aa8.51□□□□□ -1.05
CLNS1A-204ENST00000525428 TMEM190Q8WZ59 177 aa8.51□□□□□ -1.05
CLNS1A-204ENST00000525428 BBC3Q96PG8 261 aaPredicted RBP8.51□□□□□ -1.05
CLNS1A-204ENST00000525428 CSMD2Q7Z408 3487 aa8.51□□□□□ -1.05
CLNS1A-204ENST00000525428 DOPEY1Q5JWR5 2465 aa8.51□□□□□ -1.05
CLNS1A-204ENST00000525428 ADORA2A-AS1P86434 159 aa8.51□□□□□ -1.05
CLNS1A-204ENST00000525428 PRR9Q5T870 116 aa8.51□□□□□ -1.05
CLNS1A-204ENST00000525428 PTPN13Q12923 2485 aa8.5□□□□□ -1.05
CLNS1A-204ENST00000525428 TMEM178BH3BS89 294 aa8.5□□□□□ -1.05
CLNS1A-204ENST00000525428 CTSGP08311 255 aa8.5□□□□□ -1.05
CLNS1A-204ENST00000525428 DEFB1P60022 68 aa8.5□□□□□ -1.05
CLNS1A-204ENST00000525428 RNF223E7ERA6 249 aa8.5□□□□□ -1.05
CLNS1A-204ENST00000525428 M0R2P5 195 aa8.5□□□□□ -1.05
CLNS1A-204ENST00000525428 C3orf22Q8N5N4 141 aa8.5□□□□□ -1.05
CLNS1A-204ENST00000525428 FASNP49327 2511 aaKnown RBP8.5□□□□□ -1.05
CLNS1A-204ENST00000525428 TRAV12-3A0A0B4J271 114 aa8.49□□□□□ -1.05
CLNS1A-204ENST00000525428 C17orf100A8MU93 164 aa8.49□□□□□ -1.05
CLNS1A-204ENST00000525428 DPH3P1Q9H4G8 78 aa8.49□□□□□ -1.05
CLNS1A-204ENST00000525428 HELZ2Q9BYK8 2649 aaKnown RBP8.49□□□□□ -1.05
CLNS1A-204ENST00000525428 A0A0B4J2C4 111 aa8.49□□□□□ -1.05
CLNS1A-204ENST00000525428 IGLV1-47P01700 117 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms