RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SIVA1O15304 175 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 MGPP08493 103 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 IGLC6P0CF74 106 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 GZMBP10144 247 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 RAB4BP61018 213 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 RPL36AP83881 106 aaKnown RBP3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 ADIRFQ15847 76 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 ESRGQ1W209 222 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 CT83Q5H943 113 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 FAM231DQ6ZW35 169 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 LINC01551Q86U37 167 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 ATP6V0E2Q8NHE4 81 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 ZNRF2Q8NHG8 242 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 RPL36ALQ969Q0 106 aaKnown RBP3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 SSBP4Q9BWG4 385 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 Q9H8V8 135 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 NAT8Q9UHE5 227 aa3.74□□□□□ -1.81
HMGB1P40-201ENST00000525121 A0A087WWC5 75 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 LOC100131303A0A0U1RQF7 123 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 GAGE12JA6NER3 117 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 K7EP13 123 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 EVI2AP22794 236 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 CTRLP40313 264 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 TIRAPP58753 221 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 GAGE1Q13065 139 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 GAGE4Q13068 117 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 GAGE5Q13069 117 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 TWIST1Q15672 202 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 GAGE13Q4V321 117 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 OR10J3Q5JRS4 329 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 CLLU1Q5K131 121 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 C1orf134Q5TEV5 83 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 WDR73Q6P4I2 378 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 KCNIP4Q6PIL6 250 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 LYPD5Q6UWN5 251 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 LYZL1Q6UWQ5 148 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 LINC00336Q6ZUF6 198 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 C14orf178Q8N769 122 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 SAMD10Q9BYL1 202 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 GTSF1LQ9H1H1 148 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 JPT2Q9H910 190 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 OSTCQ9NRP0 149 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 TENM2Q9NT68 2774 aa3.73□□□□□ -1.81
HMGB1P40-201ENST00000525121 TRBV7-3A0A075B6L6 115 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 CRYGDP07320 174 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 BTF3P20290 206 aaKnown RBP3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 NTF3P20783 257 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 LELP1Q5T871 98 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 UFSP1Q6NVU6 142 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 Q6ZSN1 163 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 C6orf223Q8N319 242 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 C10orf126Q8N4M7 172 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 OR10G8Q8NGN5 311 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 TSKUQ8WUA8 353 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 ISOC2Q96AB3 205 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 GFRA4Q9GZZ7 299 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 DPH3P1Q9H4G8 78 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 TNFRSF18Q9Y5U5 241 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 URGCP-MRPS24S4R325 110 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 DNAH7Q8WXX0 4024 aa3.72□□□□□ -1.81
HMGB1P40-201ENST00000525121 IGHV3-38A0A0C4DH36 116 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 A0A1B0GUT8 65 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 FAM231BA6NCW3 169 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 HIGD1CA8MV81 97 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 PPP1R2P9O14990 202 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 PKIAP61925 76 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 RPL23P62829 140 aaKnown RBP3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 SRSF3P84103 164 aaKnown RBP3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 PNRC1Q12796 327 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 RIGQ13278 110 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 TMEM97Q5BJF2 176 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 UQCC3Q6UW78 93 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 Q6ZR54 194 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 NFE4Q86UQ8 179 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 ZNF575Q86XF7 245 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 WFDC10BQ8IUB3 73 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 PGLYRP4Q96LB8 373 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 DNAJC30Q96LL9 226 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 CNFNQ9BYD5 112 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 NAT8BQ9UHF3 227 aa3.71□□□□□ -1.82
HMGB1P40-201ENST00000525121 CSMD3Q7Z407 3707 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 A0A087WX48 190 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 PRSS29PA6NIE9 313 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 C9JQL5 133 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 EREGO14944 169 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 S100A8P05109 93 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 DNAH10OSP0CZ25 163 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 LINC00694P0DN24 101 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 UBE2D3P61077 147 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 UBE2D2P62837 147 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 LINC01556Q5JQF7 62 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 SUMO4Q6EEV6 95 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 RASL11AQ6T310 242 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 DAZ4Q86SG3 579 aaKnown RBP3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 GTSF1Q8WW33 167 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 DAZ3Q9NR90 486 aaKnown RBP3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 MSRB1Q9NZV6 116 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 V9GYV3 84 aa3.7□□□□□ -1.82
HMGB1P40-201ENST00000525121 STARD9Q9P2P6 4700 aa3.69□□□□□ -1.82
HMGB1P40-201ENST00000525121 MUC4Q99102 2169 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms