RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 SIRPDQ9H106 197 aa9.91□□□□□ -0.82
CAPN1-202ENST00000524773 IGHV4-4A0A075B6R2 117 aa9.91□□□□□ -0.82
CAPN1-202ENST00000524773 A0A0J9YY99 117 aa9.91□□□□□ -0.82
CAPN1-202ENST00000524773 CFC1BP0CG36 223 aa9.91□□□□□ -0.82
CAPN1-202ENST00000524773 CFC1P0CG37 223 aa9.91□□□□□ -0.82
CAPN1-202ENST00000524773 NDUFA11Q86Y39 141 aa9.91□□□□□ -0.82
CAPN1-202ENST00000524773 LINC00477Q96M19 166 aa9.91□□□□□ -0.82
CAPN1-202ENST00000524773 UBE2D1P51668 147 aa9.9□□□□□ -0.82
CAPN1-202ENST00000524773 FBXL19-AS1Q494R0 122 aa9.9□□□□□ -0.82
CAPN1-202ENST00000524773 OR10J6PQ8NGY7 276 aa9.9□□□□□ -0.82
CAPN1-202ENST00000524773 BEX4Q9NWD9 120 aaPredicted RBP9.9□□□□□ -0.82
CAPN1-202ENST00000524773 SCGB1A1P11684 91 aa9.9□□□□□ -0.82
CAPN1-202ENST00000524773 ITPR1Q14643 2758 aa9.9□□□□□ -0.82
CAPN1-202ENST00000524773 Q6ZUT4 128 aa9.9□□□□□ -0.83
CAPN1-202ENST00000524773 ITLN2Q8WWU7 325 aaPredicted RBP9.9□□□□□ -0.83
CAPN1-202ENST00000524773 ZANQ9Y493 2812 aa9.89□□□□□ -0.83
CAPN1-202ENST00000524773 TRAV12-2A0A075B6T6 113 aa9.89□□□□□ -0.83
CAPN1-202ENST00000524773 TRAV21A0A0B4J279 112 aa9.89□□□□□ -0.83
CAPN1-202ENST00000524773 CENPVL3A0A0U1RRI6 287 aa9.89□□□□□ -0.83
CAPN1-202ENST00000524773 ELANEP08246 267 aa9.89□□□□□ -0.83
CAPN1-202ENST00000524773 MINOS1Q5TGZ0 78 aa9.89□□□□□ -0.83
CAPN1-202ENST00000524773 MINOS1-NBL1R4GNA1 71 aa9.89□□□□□ -0.83
CAPN1-202ENST00000524773 TRAV12-3A0A0B4J271 114 aa9.89□□□□□ -0.83
CAPN1-202ENST00000524773 ANKRD29Q8N6D5 301 aa9.89□□□□□ -0.83
CAPN1-202ENST00000524773 RNF183Q96D59 192 aa9.89□□□□□ -0.83
CAPN1-202ENST00000524773 EIF4EBP3O60516 100 aaPredicted RBP9.88□□□□□ -0.83
CAPN1-202ENST00000524773 ADORA2A-AS1P86434 159 aa9.88□□□□□ -0.83
CAPN1-202ENST00000524773 SUMO4Q6EEV6 95 aa9.88□□□□□ -0.83
CAPN1-202ENST00000524773 BPESC1Q9GZL8 116 aa9.88□□□□□ -0.83
CAPN1-202ENST00000524773 PRORYQ9H606 182 aa9.88□□□□□ -0.83
CAPN1-202ENST00000524773 ACACBO00763 2458 aa9.88□□□□□ -0.83
CAPN1-202ENST00000524773 U3KQE9 123 aa9.88□□□□□ -0.83
CAPN1-202ENST00000524773 ABCA2Q9BZC7 2435 aa9.88□□□□□ -0.83
CAPN1-202ENST00000524773 TRAV2A0A0B4J234 112 aa9.87□□□□□ -0.83
CAPN1-202ENST00000524773 TRAV41A0A0B4J266 112 aa9.87□□□□□ -0.83
CAPN1-202ENST00000524773 C11orf71Q6IPW1 123 aa9.87□□□□□ -0.83
CAPN1-202ENST00000524773 C5orf56Q8N8D9 126 aa9.87□□□□□ -0.83
CAPN1-202ENST00000524773 UBE2D3P61077 147 aa9.87□□□□□ -0.83
CAPN1-202ENST00000524773 NPC2P61916 151 aa9.87□□□□□ -0.83
CAPN1-202ENST00000524773 UBE2D2P62837 147 aa9.87□□□□□ -0.83
CAPN1-202ENST00000524773 RNASE13Q5GAN3 156 aaKnown RBP9.87□□□□□ -0.83
CAPN1-202ENST00000524773 CENPEQ02224 2701 aa9.87□□□□□ -0.83
CAPN1-202ENST00000524773 IGHV3-30P01768 117 aa9.87□□□□□ -0.83
CAPN1-202ENST00000524773 IGHV3-30-5P0DP03 117 aa9.87□□□□□ -0.83
CAPN1-202ENST00000524773 LINC00315P59091 139 aa9.87□□□□□ -0.83
CAPN1-202ENST00000524773 KLK9Q2XQG4 91 aa9.87□□□□□ -0.83
CAPN1-202ENST00000524773 KLK9Q9UKQ9 250 aa9.87□□□□□ -0.83
CAPN1-202ENST00000524773 TRBV7-1A0A0A6YYK4 115 aa9.86□□□□□ -0.83
CAPN1-202ENST00000524773 C9JAW5 83 aa9.86□□□□□ -0.83
CAPN1-202ENST00000524773 A4D1N5 150 aa9.86□□□□□ -0.83
CAPN1-202ENST00000524773 SDHAF1A6NFY7 115 aa9.86□□□□□ -0.83
CAPN1-202ENST00000524773 IGIPA6NJ69 53 aa9.86□□□□□ -0.83
CAPN1-202ENST00000524773 C9orf139Q6ZV77 190 aa9.86□□□□□ -0.83
CAPN1-202ENST00000524773 NOTCH3Q9UM47 2321 aa9.85□□□□□ -0.83
CAPN1-202ENST00000524773 IGHV4-39P01824 125 aa9.85□□□□□ -0.83
CAPN1-202ENST00000524773 HTN1P15515 57 aa9.85□□□□□ -0.83
CAPN1-202ENST00000524773 UBE2E1P51965 193 aa9.85□□□□□ -0.83
CAPN1-202ENST00000524773 IGHV3-73A0A0B4J1V6 119 aa9.85□□□□□ -0.83
CAPN1-202ENST00000524773 PRM2P04554 102 aa9.85□□□□□ -0.83
CAPN1-202ENST00000524773 PF4V1P10720 104 aa9.85□□□□□ -0.83
CAPN1-202ENST00000524773 BLCAPP62952 87 aa9.85□□□□□ -0.83
CAPN1-202ENST00000524773 Q6ZSV7 163 aa9.85□□□□□ -0.83
CAPN1-202ENST00000524773 MDFICQ9P1T7 246 aa9.85□□□□□ -0.83
CAPN1-202ENST00000524773 NPFFO15130 113 aa9.84□□□□□ -0.83
CAPN1-202ENST00000524773 PMVKQ15126 192 aa9.84□□□□□ -0.83
CAPN1-202ENST00000524773 TEN1Q86WV5 123 aa9.84□□□□□ -0.83
CAPN1-202ENST00000524773 NACAE9PAV3 2078 aa9.84□□□□□ -0.83
CAPN1-202ENST00000524773 SOCS3O14543 225 aa9.84□□□□□ -0.83
CAPN1-202ENST00000524773 MRPL53Q96EL3 112 aaKnown RBP9.84□□□□□ -0.83
CAPN1-202ENST00000524773 RHPN1-AS1Q9BWJ2 59 aa9.84□□□□□ -0.83
CAPN1-202ENST00000524773 A8MWV9 139 aa9.84□□□□□ -0.83
CAPN1-202ENST00000524773 J3QQQ9 107 aa9.84□□□□□ -0.83
CAPN1-202ENST00000524773 TCTEX1D4Q5JR98 221 aa9.84□□□□□ -0.83
CAPN1-202ENST00000524773 CEMP1Q6PRD7 247 aaPredicted RBP9.84□□□□□ -0.83
CAPN1-202ENST00000524773 PPDPFLQ8WWR9 84 aa9.84□□□□□ -0.83
CAPN1-202ENST00000524773 KIF25-AS1Q9Y6Z4 181 aa9.84□□□□□ -0.83
CAPN1-202ENST00000524773 A8MZ25 164 aa9.83□□□□□ -0.84
CAPN1-202ENST00000524773 ZNF56Q15929 161 aa9.83□□□□□ -0.84
CAPN1-202ENST00000524773 Q1RN00 199 aa9.83□□□□□ -0.84
CAPN1-202ENST00000524773 SS18L2Q9UHA2 77 aa9.83□□□□□ -0.84
CAPN1-202ENST00000524773 LGALS3P17931 250 aaKnown RBP9.83□□□□□ -0.84
CAPN1-202ENST00000524773 FAM159AQ6UWV7 190 aa9.83□□□□□ -0.84
CAPN1-202ENST00000524773 C10orf126Q8N4M7 172 aa9.83□□□□□ -0.84
CAPN1-202ENST00000524773 AMELXQ99217 191 aa9.83□□□□□ -0.84
CAPN1-202ENST00000524773 TRBV20-1A0A075B6N2 111 aa9.82□□□□□ -0.84
CAPN1-202ENST00000524773 LINC01619G3V211 115 aa9.82□□□□□ -0.84
CAPN1-202ENST00000524773 HERVK_113P61574 105 aa9.82□□□□□ -0.84
CAPN1-202ENST00000524773 PRO1854Q9UHT4 67 aa9.82□□□□□ -0.84
CAPN1-202ENST00000524773 A0A0J9YXV3 536 aa9.82□□□□□ -0.84
CAPN1-202ENST00000524773 CRLF1O75462 422 aa9.82□□□□□ -0.84
CAPN1-202ENST00000524773 P0DMU3 169 aa9.82□□□□□ -0.84
CAPN1-202ENST00000524773 FAM231AP0DMU4 169 aa9.82□□□□□ -0.84
CAPN1-202ENST00000524773 FAM231CP0DMU5 169 aa9.82□□□□□ -0.84
CAPN1-202ENST00000524773 MUSTN1Q8IVN3 82 aa9.82□□□□□ -0.84
CAPN1-202ENST00000524773 SLC25A29Q8N8R3 303 aa9.82□□□□□ -0.84
CAPN1-202ENST00000524773 ZNF688P0C7X2 276 aa9.81□□□□□ -0.84
CAPN1-202ENST00000524773 POLR2KP53803 58 aaKnown RBP9.81□□□□□ -0.84
CAPN1-202ENST00000524773 C2CD3Q4AC94 2353 aa9.81□□□□□ -0.84
CAPN1-202ENST00000524773 SLC25A20O43772 301 aa9.81□□□□□ -0.84
CAPN1-202ENST00000524773 C10orf99Q6UWK7 81 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms